Published in Zoolog Sci on October 01, 2005
Methylated glycans as conserved targets of animal and fungal innate defense. Proc Natl Acad Sci U S A (2014) 0.88
RNA interference in marine and freshwater sponges: actin knockdown in Tethya wilhelma and Ephydatia muelleri by ingested dsRNA expressing bacteria. BMC Biotechnol (2011) 0.88
The ancestral gene repertoire of animal stem cells. Proc Natl Acad Sci U S A (2015) 0.84
Cytotoxicity and glycan-binding properties of an 18 kDa lectin isolated from the marine sponge Halichondria okadai. Toxins (Basel) (2012) 0.78
Isolation of novel prototype galectins from the marine ball sponge Cinachyrella sp. guided by their modulatory activity on mammalian glutamate-gated ion channels. Glycobiology (2012) 0.77
Porifera Lectins: Diversity, Physiological Roles and Biotechnological Potential. Mar Drugs (2015) 0.75
Cellular localization of debromohymenialdisine and hymenialdisine in the marine sponge Axinella sp. using a newly developed cell purification protocol. Mar Biotechnol (NY) (2011) 0.75
A Proposal for the Evolution of Cathepsin and Silicatein in Sponges. J Mol Evol (2015) 0.75
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res (2002) 47.62
MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res (2005) 31.64
Hagfish embryology with reference to the evolution of the neural crest. Nature (2007) 3.17
The African coelacanth genome provides insights into tetrapod evolution. Nature (2013) 2.78
Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution. Nat Genet (2013) 2.76
The innate immune repertoire in cnidaria--ancestral complexity and stochastic gene loss. Genome Biol (2007) 2.32
The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons. J Cell Sci (2007) 2.23
Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences. Mol Phylogenet Evol (2010) 1.98
Evidence for different origin of sex chromosomes in snakes, birds, and mammals and step-wise differentiation of snake sex chromosomes. Proc Natl Acad Sci U S A (2006) 1.95
Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting. Dev Growth Differ (2006) 1.94
An early extrasolar planetary system revealed by planetesimal belts in beta Pictoris. Nature (2004) 1.92
Improvement in the accuracy of multiple sequence alignment program MAFFT. Genome Inform (2005) 1.83
FGFR-related gene nou-darake restricts brain tissues to the head region of planarians. Nature (2002) 1.80
Sister group relationship of turtles to the bird-crocodilian clade revealed by nuclear DNA-coded proteins. Mol Biol Evol (2004) 1.66
To be or not to be a flatworm: the acoel controversy. PLoS One (2009) 1.59
Expression of stem cell pluripotency factors during regeneration in newts. Dev Dyn (2009) 1.52
Counterion displacement in the molecular evolution of the rhodopsin family. Nat Struct Mol Biol (2004) 1.44
The molecular logic for planarian regeneration along the anterior-posterior axis. Nature (2013) 1.41
Planarian Hedgehog/Patched establishes anterior-posterior polarity by regulating Wnt signaling. Proc Natl Acad Sci U S A (2009) 1.39
Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs. Proc Natl Acad Sci U S A (2003) 1.38
Cellular and molecular dissection of pluripotent adult somatic stem cells in planarians. Dev Growth Differ (2010) 1.34
Craniofacial development of hagfishes and the evolution of vertebrates. Nature (2012) 1.34
Rapid accumulation of nucleostemin in nucleolus during newt regeneration. Dev Dyn (2007) 1.30
Functional development of Src tyrosine kinases during evolution from a unicellular ancestor to multicellular animals. Proc Natl Acad Sci U S A (2006) 1.29
Morphological and functional recovery of the planarian photosensing system during head regeneration. Zoolog Sci (2004) 1.28
Different requirements for conserved post-transcriptional regulators in planarian regeneration and stem cell maintenance. Dev Biol (2010) 1.26
On the carapacial ridge in turtle embryos: its developmental origin, function and the chelonian body plan. Development (2007) 1.23
The expression of neural-specific genes reveals the structural and molecular complexity of the planarian central nervous system. Mech Dev (2002) 1.23
Reconstruction of dopaminergic neural network and locomotion function in planarian regenerates. Dev Neurobiol (2007) 1.22
Wnt signaling is required for antero-posterior patterning of the planarian brain. Dev Biol (2007) 1.20
Highly conserved linkage homology between birds and turtles: bird and turtle chromosomes are precise counterparts of each other. Chromosome Res (2005) 1.19
Genes for the peptidoglycan synthesis pathway are essential for chloroplast division in moss. Proc Natl Acad Sci U S A (2006) 1.18
Identification and origin of the germline stem cells as revealed by the expression of nanos-related gene in planarians. Dev Growth Differ (2006) 1.18
Detection of apoptosis during planarian regeneration by the expression of apoptosis-related genes and TUNEL assay. Gene (2004) 1.17
Single-cell gene profiling of planarian stem cells using fluorescent activated cell sorting and its "index sorting" function for stem cell research. Dev Growth Differ (2010) 1.16
Evolutionary developmental perspective for the origin of turtles: the folding theory for the shell based on the developmental nature of the carapacial ridge. Evol Dev (2011) 1.15
Neural projections in planarian brain revealed by fluorescent dye tracing. Zoolog Sci (2005) 1.13
Evolutionary biology: lamprey Hox genes and the evolution of jaws. Nature (2004) 1.13
Plastid peptidoglycan. Biochim Biophys Acta (2009) 1.13
Comparative genomics approach to detecting split-coding regions in a low-coverage genome: lessons from the chimaera Callorhinchus milii (Holocephali, Chondrichthyes). Brief Bioinform (2011) 1.12
Dissecting planarian central nervous system regeneration by the expression of neural-specific genes. Dev Growth Differ (2002) 1.11
Evolution and regeneration of the planarian central nervous system. Dev Growth Differ (2009) 1.11
cDNA-based gene mapping and GC3 profiling in the soft-shelled turtle suggest a chromosomal size-dependent GC bias shared by sauropsids. Chromosome Res (2006) 1.10
ERK signaling controls blastema cell differentiation during planarian regeneration. Development (2011) 1.08
Basal jawed vertebrate phylogeny inferred from multiple nuclear DNA-coded genes. BMC Biol (2004) 1.08
Induction of a noggin-like gene by ectopic DV interaction during planarian regeneration. Dev Biol (2002) 1.08
Characterization and categorization of fluorescence activated cell sorted planarian stem cells by ultrastructural analysis. Dev Growth Differ (2007) 1.07
RNA interference by feeding in vitro-synthesized double-stranded RNA to planarians: methodology and dynamics. Dev Dyn (2013) 1.07
Development of the adenohypophysis in the lamprey: evolution of epigenetic patterning programs in organogenesis. J Exp Zool B Mol Dev Evol (2003) 1.06
A wide-range phylogenetic analysis of Zic proteins: implications for correlations between protein structure conservation and body plan complexity. Genomics (2006) 1.03
NtPolI-like1 and NtPolI-like2, bacterial DNA polymerase I homologs isolated from BY-2 cultured tobacco cells, encode DNA polymerases engaged in DNA replication in both plastids and mitochondria. Plant Cell Physiol (2007) 1.03
Hox gene expression patterns in Lethenteron japonicum embryos--insights into the evolution of the vertebrate Hox code. Dev Biol (2007) 1.03
Bidirectional promoters are the major source of gene activation-associated non-coding RNAs in mammals. BMC Genomics (2014) 1.03
An Arabidopsis homolog of the bacterial peptidoglycan synthesis enzyme MurE has an essential role in chloroplast development. Plant J (2007) 1.02
Seasonal change in bacterial flora and biomass in mountain snow from the Tateyama Mountains, Japan, analyzed by 16S rRNA gene sequencing and real-time PCR. Appl Environ Microbiol (2005) 1.02
Piwi expression in archeocytes and choanocytes in demosponges: insights into the stem cell system in demosponges. Evol Dev (2010) 1.00
Lamprey as an evo-devo model: lessons from comparative embryology and molecular phylogenetics. Genesis (2002) 0.99
A pilot study on antiplaque effects of mastic chewing gum in the oral cavity. J Periodontol (2003) 0.99
Search for the evolutionary origin of a brain: planarian brain characterized by microarray. Mol Biol Evol (2003) 0.98
Progressive activation of Delta-Notch signaling from around the blastopore is required to set up a functional caudal lobe in the spider Achaearanea tepidariorum. Development (2007) 0.98
Inference of the protokaryotypes of amniotes and tetrapods and the evolutionary processes of microchromosomes from comparative gene mapping. PLoS One (2012) 0.97
Unresolved orthology and peculiar coding sequence properties of lamprey genes: the KCNA gene family as test case. BMC Genomics (2011) 0.97
Planarian fibroblast growth factor receptor homologs expressed in stem cells and cephalic ganglions. Dev Growth Differ (2002) 0.95
Ancient divergence of animal protein tyrosine kinase genes demonstrated by a gene family tree including choanoflagellate genes. FEBS Lett (2008) 0.95
Osteocalcin, deoxypyridinoline and interleukin-1beta in peri-implant crevicular fluid of patients with peri-implantitis. Clin Oral Implants Res (2002) 0.95
Permanent genetic resources added to Molecular Ecology Resources Database 1 December 2010-31 January 2011. Mol Ecol Resour (2011) 0.95
Oocyte-type linker histone B4 is required for transdifferentiation of somatic cells in vivo. FASEB J (2010) 0.95
Structure and function of primitive immunoglobulin superfamily neural cell adhesion molecules: a lesson from studies on planarian. Genes Cells (2006) 0.94
Transcription activator-like effector nucleases efficiently disrupt the target gene in Iberian ribbed newts (Pleurodeles waltl), an experimental model animal for regeneration. Dev Growth Differ (2013) 0.94
Identification and distribution of tryptophan hydroxylase (TPH)-positive neurons in the planarian Dugesia japonica. Neurosci Res (2007) 0.93
Involvement of Hedgehog and FGF signalling in the lamprey telencephalon: evolution of regionalization and dorsoventral patterning of the vertebrate forebrain. Development (2011) 0.92
Modelling the global distribution of fungal species: new insights into microbial cosmopolitanism. Mol Ecol (2012) 0.92
Expression patterns of Xenopus FGF receptor-like 1/nou-darake in early Xenopus development resemble those of planarian nou-darake and Xenopus FGF8. Dev Dyn (2004) 0.92
Regeneration-dependent conditional gene knockdown (Readyknock) in planarian: demonstration of requirement for Djsnap-25 expression in the brain for negative phototactic behavior. Dev Growth Differ (2007) 0.92
Turtle-chicken chimera: an experimental approach to understanding evolutionary innovation in the turtle. Dev Dyn (2005) 0.91
Comprehensive gene expression analyses in pluripotent stem cells of a planarian, Dugesia japonica. Int J Dev Biol (2012) 0.90
Role of c-Jun N-terminal kinase activation in blastema formation during planarian regeneration. Dev Growth Differ (2011) 0.90
Planarians maintain a constant ratio of different cell types during changes in body size by using the stem cell system. Zoolog Sci (2009) 0.90
Regeneration in an evolutionarily primitive brain--the planarian Dugesia japonica model. Eur J Neurosci (2011) 0.90
The peptidoglycan biosynthesis genes MurA and MraY are related to chloroplast division in the moss Physcomitrella patens. Plant Cell Physiol (2009) 0.90
Expression profiles during dedifferentiation in newt lens regeneration revealed by expressed sequence tags. Mol Vis (2010) 0.89
Clathrin-mediated endocytic signals are required for the regeneration of, as well as homeostasis in, the planarian CNS. Development (2007) 0.89
Evolution of the gene families forming the Pax/Six regulatory network: isolation of genes from primitive animals and molecular phylogenetic analyses. FEBS Lett (2007) 0.89
Expression and interaction of muscle-related genes in the lamprey imply the evolutionary scenario for vertebrate skeletal muscle, in association with the acquisition of the neck and fins. Dev Biol (2010) 0.89
Mechanisms of heart development in the Japanese lamprey, Lethenteron japonicum. Evol Dev (2010) 0.89
Evolutionary history and functional characterization of androgen receptor genes in jawed vertebrates. Endocrinology (2009) 0.89
Comparative transcriptome analysis between planarian Dugesia japonica and other platyhelminth species. BMC Genomics (2012) 0.88
DjCBC-1, a conserved DEAD box RNA helicase of the RCK/p54/Me31B family, is a component of RNA-protein complexes in planarian stem cells and neurons. Dev Dyn (2007) 0.88
Ancestral and derived attributes of the dlx gene repertoire, cluster structure and expression patterns in an African cichlid fish. Evodevo (2011) 0.88