Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea.

PubWeight™: 1.08‹?› | Rank: Top 10%

🔗 View Article (PMID 16431068)

Published in Syst Appl Microbiol on January 23, 2006

Authors

Niculina Musat1, Ursula Werner, Katrin Knittel, Steffen Kolb, Tanja Dodenhof, Justus E E van Beusekom, Dirk de Beer, Nicole Dubilier, Rudolf Amann

Author Affiliations

1: Max Planck Institute for Marine Microbiology, Celsiusstr. 1, D-28359 Bremen, Germany.

Articles citing this

Diversity and dynamics of rare and of resident bacterial populations in coastal sands. ISME J (2011) 1.63

Sulfate-reducing microorganisms in wetlands - fameless actors in carbon cycling and climate change. Front Microbiol (2012) 1.22

Characterization of nitrifying, denitrifying, and overall bacterial communities in permeable marine sediments of the northeastern Gulf of Mexico. Appl Environ Microbiol (2008) 1.01

Temporal variability of coastal Planctomycetes clades at Kabeltonne station, North Sea. Appl Environ Microbiol (2011) 0.99

Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques. Environ Microbiol (2013) 0.98

Planctomycetes dominate biofilms on surfaces of the kelp Laminaria hyperborea. BMC Microbiol (2010) 0.98

Evolutionary dynamics of the prokaryotic adaptive immunity system CRISPR-Cas in an explicit ecological context. J Bacteriol (2013) 0.89

Bringing Planctomycetes into pure culture. Front Microbiol (2012) 0.85

Diversity and transport of microorganisms in intertidal sands of the California coast. Appl Environ Microbiol (2014) 0.83

Bioprospecting from marine sediments of New Brunswick, Canada: exploring the relationship between total bacterial diversity and actinobacteria diversity. Mar Drugs (2014) 0.81

Determination of the diversity of Rhodopirellula isolates from European seas by multilocus sequence analysis. Appl Environ Microbiol (2009) 0.81

Microbial community composition and diversity in Caspian Sea sediments. FEMS Microbiol Ecol (2014) 0.81

Expanding the World of Marine Bacterial and Archaeal Clades. Front Microbiol (2016) 0.81

Exploration of Deinococcus-Thermus molecular diversity by novel group-specific PCR primers. Microbiologyopen (2013) 0.79

Anaerobic degradation of cyclohexane by sulfate-reducing bacteria from hydrocarbon-contaminated marine sediments. Front Microbiol (2015) 0.79

Effects of actinomycete secondary metabolites on sediment microbial communities. Appl Environ Microbiol (2016) 0.75

The bacterial community structure of hydrocarbon-polluted marine environments as the basis for the definition of an ecological index of hydrocarbon exposure. Microbes Environ (2014) 0.75

Diversity of Marine-Derived Aspergillus from Tidal Mudflats and Sea Sand in Korea. Mycobiology (2016) 0.75

Diverse Bacterial Groups Contribute to the Alkane Degradation Potential of Chronically Polluted Subantarctic Coastal Sediments. Microb Ecol (2015) 0.75

Articles by these authors

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res (2007) 35.65

The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. Syst Appl Microbiol (2008) 8.21

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria. Appl Environ Microbiol (2002) 5.90

Symbiosis insights through metagenomic analysis of a microbial consortium. Nature (2006) 5.04

Animals in a bacterial world, a new imperative for the life sciences. Proc Natl Acad Sci U S A (2013) 5.03

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. Nature (2012) 4.42

Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation. Proc Natl Acad Sci U S A (2005) 4.15

Application of tetranucleotide frequencies for the assignment of genomic fragments. Environ Microbiol (2004) 4.12

Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science (2012) 4.11

Nitrite-driven anaerobic methane oxidation by oxygenic bacteria. Nature (2010) 4.06

Diversity and structure of bacterial communities in Arctic versus Antarctic pack ice. Appl Environ Microbiol (2003) 3.50

Diversity and distribution of methanotrophic archaea at cold seeps. Appl Environ Microbiol (2005) 3.45

Application of a newly developed ARB software-integrated tool for in silico terminal restriction fragment length polymorphism analysis reveals the dominance of a novel pmoA cluster in a forest soil. Appl Environ Microbiol (2005) 3.24

Revising the nitrogen cycle in the Peruvian oxygen minimum zone. Proc Natl Acad Sci U S A (2009) 3.11

Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea. Proc Natl Acad Sci U S A (2007) 2.82

Insights into the genome of large sulfur bacteria revealed by analysis of single filaments. PLoS Biol (2007) 2.69

Release LTPs104 of the All-Species Living Tree. Syst Appl Microbiol (2011) 2.46

Microbial reefs in the Black Sea fueled by anaerobic oxidation of methane. Science (2002) 2.45

Detoxification of sulphidic African shelf waters by blooming chemolithotrophs. Nature (2008) 2.37

Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds. Int J Syst Evol Microbiol (2002) 2.29

A single-cell view on the ecophysiology of anaerobic phototrophic bacteria. Proc Natl Acad Sci U S A (2008) 2.23

In situ accessibility of small-subunit rRNA of members of the domains Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes. Appl Environ Microbiol (2003) 2.15

A conspicuous nickel protein in microbial mats that oxidize methane anaerobically. Nature (2003) 2.10

An improved protocol for quantification of freshwater Actinobacteria by fluorescence in situ hybridization. Appl Environ Microbiol (2003) 2.09

Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink. Nature (2006) 2.06

High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters. Appl Environ Microbiol (2003) 2.03

Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea. Appl Environ Microbiol (2002) 1.96

Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages. Environ Microbiol (2004) 1.94

Comparative sequence analysis and oligonucleotide probe design based on 23S rRNA genes of Alphaproteobacteria from North Sea bacterioplankton. Syst Appl Microbiol (2004) 1.91

Hydrogen is an energy source for hydrothermal vent symbioses. Nature (2011) 1.86

Latitudinal distribution of prokaryotic picoplankton populations in the Atlantic Ocean. Environ Microbiol (2009) 1.76

Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes. Appl Environ Microbiol (2003) 1.70

Biological and chemical sulfide oxidation in a Beggiatoa inhabited marine sediment. ISME J (2007) 1.70

Anaerobic oxidation of short-chain hydrocarbons by marine sulphate-reducing bacteria. Nature (2007) 1.66

Diversity and dynamics of rare and of resident bacterial populations in coastal sands. ISME J (2011) 1.63

Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol (2010) 1.58

Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby Mud Volcano, Barents Sea. Appl Environ Microbiol (2007) 1.58

Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands. ISME J (2009) 1.55

Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group. Environ Microbiol (2009) 1.53

Diatoms respire nitrate to survive dark and anoxic conditions. Proc Natl Acad Sci U S A (2011) 1.52

Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis. Proc Natl Acad Sci U S A (2007) 1.51

Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments. ISME J (2012) 1.51

Light utilization efficiency in photosynthetic microbial mats. Environ Microbiol (2011) 1.48

Identification of DNA-synthesizing bacterial cells in coastal North Sea plankton. Appl Environ Microbiol (2002) 1.48

Flow sorting of marine bacterioplankton after fluorescence in situ hybridization. Appl Environ Microbiol (2004) 1.45

Thermophilic anaerobic oxidation of methane by marine microbial consortia. ISME J (2011) 1.44

Toward cloning of the magnetotactic metagenome: identification of magnetosome island gene clusters in uncultivated magnetotactic bacteria from different aquatic sediments. Appl Environ Microbiol (2009) 1.42

A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones. Environ Microbiol (2008) 1.42

Automated enumeration of groups of marine picoplankton after fluorescence in situ hybridization. Appl Environ Microbiol (2003) 1.42

Microheterogeneity in 16S ribosomal DNA-defined bacterial populations from a stratified planktonic environment is related to temporal changes and to ecological adaptations. Appl Environ Microbiol (2002) 1.42

A dual symbiosis shared by two mussel species, Bathymodiolus azoricus and Bathymodiolus puteoserpentis (Bivalvia: Mytilidae), from hydrothermal vents along the northern Mid-Atlantic Ridge. Environ Microbiol (2006) 1.37

Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system. Appl Environ Microbiol (2007) 1.36

An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments. FEMS Microbiol Ecol (2004) 1.35

Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum. Proc Natl Acad Sci U S A (2010) 1.34

Simultaneous fluorescence in situ hybridization of mRNA and rRNA in environmental bacteria. Appl Environ Microbiol (2004) 1.33

Are readily culturable bacteria in coastal North Sea waters suppressed by selective grazing mortality? Appl Environ Microbiol (2003) 1.31

In situ coral reef oxygen metabolism: an eddy correlation study. PLoS One (2013) 1.30

A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria. Syst Appl Microbiol (2011) 1.30

High abundance of Crenarchaeota in a temperate acidic forest soil. FEMS Microbiol Ecol (2007) 1.29

Diversity and vertical distribution of cultured and uncultured Deltaproteobacteria in an intertidal mud flat of the Wadden Sea. Environ Microbiol (2005) 1.29

Flies lacking all synapsins are unexpectedly healthy but are impaired in complex behaviour. Eur J Neurosci (2004) 1.28

Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean. Environ Microbiol (2011) 1.28

Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes. ISME J (2007) 1.26

Phenotypic characterization of Rice Cluster III archaea without prior isolation by applying quantitative polymerase chain reaction to an enrichment culture. Environ Microbiol (2005) 1.26

The active methanotrophic community in hydromorphic soils changes in response to changing methane concentration. Environ Microbiol (2006) 1.26

In situ oxygen dynamics in coral-algal interactions. PLoS One (2012) 1.25

Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade. Environ Microbiol (2010) 1.24

Distinct flavobacterial communities in contrasting water masses of the north Atlantic Ocean. ISME J (2010) 1.24

Diversity, relative abundance and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussel species from cold seeps in the Gulf of Mexico. Environ Microbiol (2007) 1.22

Molecular and morphological characterization of the association between bacterial endosymbionts and the marine nematode Astomonema sp. from the Bahamas. Environ Microbiol (2007) 1.22

Different atmospheric methane-oxidizing communities in European beech and Norway spruce soils. Appl Environ Microbiol (2010) 1.21

High local and global diversity of Flavobacteria in marine plankton. Environ Microbiol (2007) 1.20

Is the in situ accessibility of the 16S rRNA of Escherichia coli for Cy3-labeled oligonucleotide probes predicted by a three-dimensional structure model of the 30S ribosomal subunit? Appl Environ Microbiol (2003) 1.20

In situ distribution and activity of nitrifying bacteria in freshwater sediment. Environ Microbiol (2003) 1.19

Fate of heterotrophic microbes in pelagic habitats: focus on populations. Microbiol Mol Biol Rev (2005) 1.18

Endosymbioses between bacteria and deep-sea siboglinid tubeworms from an Arctic Cold Seep (Haakon Mosby Mud Volcano, Barents Sea). Environ Microbiol (2008) 1.18

Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. ISME J (2010) 1.17

Diversity and vertical distribution of magnetotactic bacteria along chemical gradients in freshwater microcosms. FEMS Microbiol Ecol (2004) 1.17

Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments. Environ Microbiol (2012) 1.16

Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment. Environ Microbiol (2010) 1.16

Consumption of methane and CO2 by methanotrophic microbial mats from gas seeps of the anoxic Black Sea. Appl Environ Microbiol (2007) 1.15

Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use. Proc Natl Acad Sci U S A (2012) 1.14

Mechanisms of damage to corals exposed to sedimentation. Proc Natl Acad Sci U S A (2012) 1.14

Phylogeny of 16S rRNA, ribulose 1,5-bisphosphate carboxylase/oxygenase, and adenosine 5'-phosphosulfate reductase genes from gamma- and alphaproteobacterial symbionts in gutless marine worms (oligochaeta) from Bermuda and the Bahamas. Appl Environ Microbiol (2006) 1.14