Published in Appl Environ Microbiol on February 01, 2006
A cellular isolation system for real-time single-cell oxygen consumption monitoring. J R Soc Interface (2008) 1.01
Microbial growth on C1 compounds. I. Isolation and characterization of Pseudomonas AM 1. Biochem J (1961) 5.68
Analysis of bacterial function by multi-colour fluorescence flow cytometry and single cell sorting. J Microbiol Methods (2000) 2.13
Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C(3) and C(4) metabolism. Biotechnol Bioeng (2002) 1.92
A rapid and specific enrichment procedure for Hyphomicrobium spp. Antonie Van Leeuwenhoek (1972) 1.63
Switching the mode of metabolism in the yeast Saccharomyces cerevisiae. EMBO Rep (2004) 1.54
Biological methane oxidation: regulation, biochemistry, and active site structure of particulate methane monooxygenase. Crit Rev Biochem Mol Biol (2004) 1.30
Poly-beta-hydroxybutyrate biosynthesis in the facultative methylotroph methylobacterium extorquens AM1: identification and mutation of gap11, gap20, and phaR. J Bacteriol (2002) 1.23
Reconstruction of C(3) and C(4) metabolism in Methylobacterium extorquens AM1 using transposon mutagenesis. Microbiology (2003) 1.16
Quantification of central metabolic fluxes in the facultative methylotroph methylobacterium extorquens AM1 using 13C-label tracing and mass spectrometry. Biotechnol Bioeng (2003) 1.15
Energy model and metabolic flux analysis for autotrophic nitrifiers. Biotechnol Bioeng (2001) 0.99
Oxygen solubilities of media used in electrochemical respiration measurements. Anal Biochem (2003) 0.92
Overexpression of a heterologous protein, haloalkane dehalogenase, in a poly-beta-hydroxybutyrate-deficient strain of the facultative methylotroph Methylobacterium extorquens AM1. Biotechnol Bioeng (2003) 0.88
A versatile and sensitive method for measuring oxygen. Adv Exp Med Biol (1987) 0.87
In vivo tissue pO2 measurements in hamster skinfold by recessed pO2 microelectrodes and phosphorescence quenching are in agreement. Microcirculation (1998) 0.87
A low-volume platform for cell-respirometric screening based on quenched-luminescence oxygen sensing. Biosens Bioelectron (2004) 0.86
Respiration activity of Escherichia coli entrapped in a cone-shaped microwell and cylindrical micropore monitored by scanning electrochemical microscopy (SECM). Analyst (2004) 0.86
Continuous oxygen monitoring of mammalian cell growth on space shuttle mission STS-93 with a novel radioluminescent oxygen sensor. Appl Biochem Biotechnol (2003) 0.85
The Na+-translocating NADH:quinone oxidoreductase (NDH I) from Klebsiella pneumoniae and Escherichia coli: implications for the mechanism of redox-driven cation translocation by complex I. J Bioenerg Biomembr (2001) 0.82
Determination of metabolic activity of streptomycetes in soil microcosms. J Appl Microbiol (2000) 0.81
Oxygen dependent quenching of phosphorescence: a perspective. Adv Exp Med Biol (1992) 0.79
Broad-host-range cre-lox system for antibiotic marker recycling in gram-negative bacteria. Biotechniques (2002) 3.48
High-resolution metagenomics targets specific functional types in complex microbial communities. Nat Biotechnol (2008) 2.99
Methylotrophy in Methylobacterium extorquens AM1 from a genomic point of view. J Bacteriol (2003) 2.81
The expanding world of methylotrophic metabolism. Annu Rev Microbiol (2009) 2.46
Methylobacterium genome sequences: a reference blueprint to investigate microbial metabolism of C1 compounds from natural and industrial sources. PLoS One (2009) 1.94
Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C(3) and C(4) metabolism. Biotechnol Bioeng (2002) 1.92
Formaldehyde-detoxifying role of the tetrahydromethanopterin-linked pathway in Methylobacterium extorquens AM1. J Bacteriol (2003) 1.78
Bacterial populations active in metabolism of C1 compounds in the sediment of Lake Washington, a freshwater lake. Appl Environ Microbiol (2005) 1.68
Glyoxylate regeneration pathway in the methylotroph Methylobacterium extorquens AM1. J Bacteriol (2002) 1.58
A microwell array device capable of measuring single-cell oxygen consumption rates. Sens Actuators B Chem (2009) 1.57
Novel methylotrophy genes of Methylobacterium extorquens AM1 identified by using transposon mutagenesis including a putative dihydromethanopterin reductase. J Bacteriol (2003) 1.48
Implementation of microarrays for Methylobacterium extorquens AM1. OMICS (2007) 1.43
MeaB is a component of the methylmalonyl-CoA mutase complex required for protection of the enzyme from inactivation. J Biol Chem (2004) 1.43
A New Approach for Measuring Single-Cell Oxygen Consumption Rates. IEEE Trans Autom Sci Eng (2008) 1.31
Multiple formate dehydrogenase enzymes in the facultative methylotroph Methylobacterium extorquens AM1 are dispensable for growth on methanol. J Bacteriol (2004) 1.28
Flux analysis uncovers key role of functional redundancy in formaldehyde metabolism. PLoS Biol (2005) 1.27
Multiple formaldehyde oxidation/detoxification pathways in Burkholderia fungorum LB400. J Bacteriol (2004) 1.25
Genome of Methylobacillus flagellatus, molecular basis for obligate methylotrophy, and polyphyletic origin of methylotrophy. J Bacteriol (2007) 1.25
Development of an insertional expression vector system for Methylobacterium extorquens AM1 and generation of null mutants lacking mtdA and/or fch. Microbiology (2004) 1.25
Formate as the main branch point for methylotrophic metabolism in Methylobacterium extorquens AM1. J Bacteriol (2008) 1.24
Poly-beta-hydroxybutyrate biosynthesis in the facultative methylotroph methylobacterium extorquens AM1: identification and mutation of gap11, gap20, and phaR. J Bacteriol (2002) 1.23
Fluorescence in situ hybridization-flow cytometry-cell sorting-based method for separation and enrichment of type I and type II methanotroph populations. Appl Environ Microbiol (2006) 1.22
Comprehensive proteomics of Methylobacterium extorquens AM1 metabolism under single carbon and nonmethylotrophic conditions. Proteomics (2008) 1.20
Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the methylophilaceae. J Bacteriol (2011) 1.19
Estimation of methanotroph abundance in a freshwater lake sediment. Environ Microbiol (2002) 1.19
Analysis of gene islands involved in methanopterin-linked C1 transfer reactions reveals new functions and provides evolutionary insights. J Bacteriol (2005) 1.18
Characterization of a novel methanol dehydrogenase in representatives of Burkholderiales: implications for environmental detection of methylotrophy and evidence for convergent evolution. J Bacteriol (2008) 1.18
Methylophilaceae link methanol oxidation to denitrification in freshwater lake sediment as suggested by stable isotope probing and pure culture analysis. Environ Microbiol Rep (2009) 1.17
Continuous measurement of oxygen consumption by pancreatic islets. Diabetes Technol Ther (2002) 1.17
Methylotenera mobilis gen. nov., sp. nov., an obligately methylamine-utilizing bacterium within the family Methylophilaceae. Int J Syst Evol Microbiol (2006) 1.17
Reconstruction of C(3) and C(4) metabolism in Methylobacterium extorquens AM1 using transposon mutagenesis. Microbiology (2003) 1.16
Quantification of central metabolic fluxes in the facultative methylotroph methylobacterium extorquens AM1 using 13C-label tracing and mass spectrometry. Biotechnol Bioeng (2003) 1.15
A systems biology approach uncovers cellular strategies used by Methylobacterium extorquens AM1 during the switch from multi- to single-carbon growth. PLoS One (2010) 1.15
The tungsten-containing formate dehydrogenase from Methylobacterium extorquens AM1: purification and properties. Eur J Biochem (2003) 1.15
Real-time detection of actively metabolizing microbes by redox sensing as applied to methylotroph populations in Lake Washington. ISME J (2008) 1.15
Cell-to-cell heterogeneity in growth rate and gene expression in Methylobacterium extorquens AM1. J Bacteriol (2007) 1.12
Purification of the formate-tetrahydrofolate ligase from Methylobacterium extorquens AM1 and demonstration of its requirement for methylotrophic growth. J Bacteriol (2003) 1.10
Development and application of polymerase chain reaction primers based on fhcD for environmental detection of methanopterin-linked C1-metabolism in bacteria. Environ Microbiol (2005) 1.09
Physiological analysis of Methylobacterium extorquens AM1 grown in continuous and batch cultures. Arch Microbiol (2006) 1.08
A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae. PeerJ (2013) 1.08
Promoters and transcripts for genes involved in methanol oxidation in Methylobacterium extorquens AM1. Microbiology (2003) 1.06
Identification of a fourth formate dehydrogenase in Methylobacterium extorquens AM1 and confirmation of the essential role of formate oxidation in methylotrophy. J Bacteriol (2007) 1.06
Methyloversatilis universalis gen. nov., sp. nov., a novel taxon within the Betaproteobacteria represented by three methylotrophic isolates. Int J Syst Evol Microbiol (2006) 1.03
Analysis of sMMO-containing type I methanotrophs in Lake Washington sediment. Environ Microbiol (2002) 1.02
Genetic characterization of the carotenoid biosynthetic pathway in Methylobacterium extorquens AM1 and isolation of a colorless mutant. Appl Environ Microbiol (2003) 1.01
Alternative route for glyoxylate consumption during growth on two-carbon compounds by Methylobacterium extorquens AM1. J Bacteriol (2010) 1.00
QscR, a LysR-type transcriptional regulator and CbbR homolog, is involved in regulation of the serine cycle genes in Methylobacterium extorquens AM1. J Bacteriol (2003) 0.99
A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea. Genome Biol (2005) 0.98
Metabolite profiling analysis of Methylobacterium extorquens AM1 by comprehensive two-dimensional gas chromatography coupled with time-of-flight mass spectrometry. Biotechnol Bioeng (2008) 0.98
Novel methylotrophic isolates from lake sediment, description of Methylotenera versatilis sp. nov. and emended description of the genus Methylotenera. Int J Syst Evol Microbiol (2011) 0.96
Identification of genes involved in the glyoxylate regeneration cycle in Methylobacterium extorquens AM1, including two new genes, meaC and meaD. J Bacteriol (2005) 0.95
XoxF is required for expression of methanol dehydrogenase in Methylobacterium extorquens AM1. J Bacteriol (2011) 0.95
Global whole-cell FTICR mass spectrometric proteomics analysis of the heat shock response in the radioresistant bacterium Deinococcus radiodurans. J Proteome Res (2005) 0.95
Streamlined pentafluorophenylpropyl column liquid chromatography-tandem quadrupole mass spectrometry and global (13)C-labeled internal standards improve performance for quantitative metabolomics in bacteria. J Chromatogr A (2010) 0.93
QscR-mediated transcriptional activation of serine cycle genes in Methylobacterium extorquens AM1. J Bacteriol (2005) 0.92
Insights into denitrification in Methylotenera mobilis from denitrification pathway and methanol metabolism mutants. J Bacteriol (2013) 0.91
Methylosarcina lacus sp. nov., a methanotroph from Lake Washington, Seattle, USA, and emended description of the genus Methylosarcina. Int J Syst Evol Microbiol (2005) 0.91
Functioning in situ: gene expression in Methylotenera mobilis in its native environment as assessed through transcriptomics. ISME J (2009) 0.90
An integrated proteomics/transcriptomics approach points to oxygen as the main electron sink for methanol metabolism in Methylotenera mobilis. J Bacteriol (2011) 0.90
Methanotrophic populations in estuarine sediment from Newport Bay, California. FEMS Microbiol Lett (2005) 0.90
Involvement of the S-layer proteins Hpi and SlpA in the maintenance of cell envelope integrity in Deinococcus radiodurans R1. Microbiology (2006) 0.89
Expressed genome of Methylobacillus flagellatus as defined through comprehensive proteomics and new insights into methylotrophy. J Bacteriol (2010) 0.89
HspR is a global negative regulator of heat shock gene expression in Deinococcus radiodurans. Mol Microbiol (2005) 0.89
Overexpression of a heterologous protein, haloalkane dehalogenase, in a poly-beta-hydroxybutyrate-deficient strain of the facultative methylotroph Methylobacterium extorquens AM1. Biotechnol Bioeng (2003) 0.88
Interface of an array of five capillaries with an array of one-nanoliter wells for high-resolution electrophoretic analysis as an approach to high-throughput chemical cytometry. Anal Chem (2008) 0.87
Elucidation of the role of the methylene-tetrahydromethanopterin dehydrogenase MtdA in the tetrahydromethanopterin-dependent oxidation pathway in Methylobacterium extorquens AM1. J Bacteriol (2013) 0.87
Identification of an upstream regulatory sequence that mediates the transcription of mox genes in Methylobacterium extorquens AM1. Microbiology (2005) 0.87
Novel dephosphotetrahydromethanopterin biosynthesis genes discovered via mutagenesis in Methylobacterium extorquens AM1. J Bacteriol (2005) 0.87
Highly divergent genes for methanopterin-linked C1 transfer reactions in Lake Washington, assessed via metagenomic analysis and mRNA detection. Appl Environ Microbiol (2005) 0.86
Comparative transcriptomics in three Methylophilaceae species uncover different strategies for environmental adaptation. PeerJ (2013) 0.86
Development of a defined medium supporting rapid growth for Deinococcus radiodurans and analysis of metabolic capacities. Appl Microbiol Biotechnol (2006) 0.86
PqqC/D, which converts a biosynthetic intermediate to pyrroloquinoline quinone. Biochem Biophys Res Commun (2002) 0.85
Multiphyletic origins of methylotrophy in Alphaproteobacteria, exemplified by comparative genomics of Lake Washington isolates. Environ Microbiol (2015) 0.84
Population heterogeneity in Methylobacterium extorquens AM1. Microbiology (2009) 0.84
Global transcriptional and proteomic analysis of the Sig1 heat shock regulon of Deinococcus radiodurans. J Bacteriol (2005) 0.84
MtdC, a novel class of methylene tetrahydromethanopterin dehydrogenases. J Bacteriol (2005) 0.84
Involvement of two putative alternative sigma factors in stress response of the radioresistant bacterium Deinococcus radiodurans. J Bacteriol (2002) 0.82
Singlet molecular oxygen by direct excitation. Photochem Photobiol Sci (2007) 0.81
Analysis of fae and fhcD genes in Mono Lake, California. Appl Environ Microbiol (2005) 0.80
Characterization and use of a Raman liquid-core waveguide sensor using preconcentration principles. Talanta (2003) 0.79
Towards kinetic modeling of global metabolic networks: Methylobacterium extorquens AM1 growth as validation. Sheng Wu Gong Cheng Xue Bao (2008) 0.79
Direct measurement of oxygen consumption rates from attached and unattached cells in a reversibly sealed, diffusionally isolated sample chamber. Adv Biosci Biotechnol (2010) 0.79
Gas chromatography-mass spectrometry with chemometric analysis for determining ¹²C and ¹³C labeled contributions in metabolomics and ¹³C flux analysis. J Chromatogr A (2012) 0.79
Comprehensive discovery of 13C labeled metabolites in the bacterium Methylobacterium extorquens AM1 using gas chromatography-mass spectrometry. J Chromatogr A (2013) 0.79
Toward a fully integrated positive-pressure driven microfabricated liquid analyzer. Anal Chem (2002) 0.77
Labrys methylaminiphilus sp. nov., a novel facultatively methylotrophic bacterium from a freshwater lake sediment. Int J Syst Evol Microbiol (2005) 0.76
Methanotrophic communities of Saanich Inlet: a microcosm perspective. Syst Appl Microbiol (2012) 0.76
Single cell methods for methane oxidation analysis. Methods Enzymol (2011) 0.75
Development of a solid phase extraction protocol coupled with liquid chromatography mass spectrometry to analyze central carbon metabolites in lake sediment microcosms. J Sep Sci (2011) 0.75
Coherence loss in light backscattering by random media with nanoscale nonuniformities. Phys Rev E Stat Nonlin Soft Matter Phys (2007) 0.75
Sensitive refractive index detection using a broad-band optical ring resonator. Anal Chem (2012) 0.75
Monitoring of a pharmaceutical nanomilling process using grating light reflection spectroscopy. Appl Spectrosc (2005) 0.75
Development and characterization of fast responding pressure sensitive microspheres. Rev Sci Instrum (2008) 0.75
Broadband absorbance in a liquid-core optical ring resonator. Appl Spectrosc (2011) 0.75
Simultaneous velocity and pressure measurements using luminescent microspheres. Rev Sci Instrum (2010) 0.75