Published in J Comput Biol on February 13, 2006
Resolving difficult phylogenetic questions: why more sequences are not enough. PLoS Biol (2011) 3.89
Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments. Proc Natl Acad Sci U S A (2008) 2.44
Connectivity independent protein-structure alignment: a hierarchical approach. BMC Bioinformatics (2006) 1.06
CPDB: a database of circular permutation in proteins. Nucleic Acids Res (2008) 1.05
ProCKSI: a decision support system for Protein (structure) Comparison, Knowledge, Similarity and Information. BMC Bioinformatics (2007) 1.04
CPSARST: an efficient circular permutation search tool applied to the detection of novel protein structural relationships. Genome Biol (2008) 1.03
Evolutionary inaccuracy of pairwise structural alignments. Bioinformatics (2012) 0.81
Detection and alignment of 3D domain swapping proteins using angle-distance image-based secondary structural matching techniques. PLoS One (2010) 0.81
From local structure to a global framework: recognition of protein folds. J R Soc Interface (2014) 0.76
A local average distance descriptor for flexible protein structure comparison. BMC Bioinformatics (2014) 0.75
Network analysis of circular permutations in multidomain proteins reveals functional linkages for uncharacterized proteins. Cancer Inform (2015) 0.75
Role of the polycomb protein EED in the propagation of repressive histone marks. Nature (2009) 6.62
Extreme Lateral Interbody Fusion (XLIF): a novel surgical technique for anterior lumbar interbody fusion. Spine J (2006) 4.69
Terminally differentiated CD8⁺ T cells negatively affect bone regeneration in humans. Sci Transl Med (2013) 2.43
Control of the G2/M transition. Mol Biotechnol (2006) 2.02
Next-generation stool DNA test accurately detects colorectal cancer and large adenomas. Gastroenterology (2011) 1.86
Loss of CBP causes T cell lymphomagenesis in synergy with p27Kip1 insufficiency. Cancer Cell (2004) 1.80
Minimally-invasive technique for transforaminal lumbar interbody fusion (TLIF). Eur Spine J (2005) 1.56
p130/p107/p105Rb-dependent transcriptional repression during DNA-damage-induced cell-cycle exit at G2. J Cell Sci (2005) 1.39
High detection rates of colorectal neoplasia by stool DNA testing with a novel digital melt curve assay. Gastroenterology (2008) 1.34
G2 arrest in response to topoisomerase II inhibitors: the role of p53. Cancer Res (2003) 1.31
Clinical performance of an automated stool DNA assay for detection of colorectal neoplasia. Clin Gastroenterol Hepatol (2013) 1.30
Length of mitotic arrest induced by microtubule-stabilizing drugs determines cell death after mitotic exit. Mol Cancer Ther (2009) 1.24
Stool DNA testing for the detection of pancreatic cancer: assessment of methylation marker candidates. Cancer (2011) 1.20
Alpha1-antitrypsin and neutrophil elastase imbalance and lung cancer risk. Chest (2005) 1.20
The stool DNA test is more accurate than the plasma septin 9 test in detecting colorectal neoplasia. Clin Gastroenterol Hepatol (2011) 1.19
Analyzing the G2/M checkpoint. Methods Mol Biol (2004) 1.14
Physiologically based boundary conditions in finite element modelling. J Biomech (2006) 1.12
Structural and functional analysis of prehistoric lentiviruses uncovers an ancient molecular interface. Cell Host Microbe (2010) 1.11
A survey of formal methods for determining the centre of rotation of ball joints. J Biomech (2005) 1.08
Regulation of sororin by Cdk1-mediated phosphorylation. J Cell Sci (2011) 1.08
An unusual choanoflagellate protein released by Hedgehog autocatalytic processing. Proc Biol Sci (2006) 1.07
Influence of changes in stem positioning on femoral loading after THR using a short-stemmed hip implant. Clin Biomech (Bristol, Avon) (2007) 1.06
Kyphoplasty-augmented short-segment pedicle screw fixation of traumatic lumbar burst fractures: initial clinical experience and literature review. Neurosurg Focus (2005) 1.04
Joint line elevation in revision TKA leads to increased patellofemoral contact forces. J Orthop Res (2010) 1.04
Direct correlation analysis improves fold recognition. Comput Biol Chem (2011) 1.03
Association of nucleotide patterns with gene function classes: application to human 3' untranslated sequences. Bioinformatics (2002) 1.03
Toward the detection and validation of repeats in protein structure. Proteins (2004) 1.02
Developmental hip dysplasia treated with total hip arthroplasty with a straight stem and a threaded cup. J Bone Joint Surg Am (2004) 1.02
De novo backbone scaffolds for protein design. Proteins (2010) 0.98
Short and long-term tumor cell responses to Aurora kinase inhibitors. Exp Cell Res (2009) 0.98
Absolute and functional iron deficiency in professional athletes during training and recovery. Int J Cardiol (2010) 0.96
Using scores derived from statistical coupling analysis to distinguish correct and incorrect folds in de-novo protein structure prediction. Proteins (2008) 0.96
Prolonged Jackson-Pratt drainage in the management of lumbar cerebrospinal fluid leaks. Surg Neurol (2006) 0.96
Quantification of methylated markers with a multiplex methylation-specific technology. Clin Chem (2011) 0.95
Circulating endothelial progenitor cells inversely associate with organ dysfunction in sepsis. Intensive Care Med (2012) 0.95
Mechanical conditions in the initial phase of bone healing. Clin Biomech (Bristol, Avon) (2006) 0.95
Structure of the capsid amino-terminal domain from the betaretrovirus, Jaagsiekte sheep retrovirus. J Mol Biol (2008) 0.95
THA loading arising from increased femoral anteversion and offset may lead to critical cement stresses. J Orthop Res (2003) 0.94
The mechanism of erythrocyte invasion by the malarial parasite, Plasmodium falciparum. Semin Cell Dev Biol (2011) 0.93
The influence of alignment on the musculo-skeletal loading conditions at the knee. Langenbecks Arch Surg (2003) 0.92
The spectral content of postural sway during quiet stance: influences of age, vision and somatosensory inputs. J Electromyogr Kinesiol (2011) 0.91
Efficacy of the functional movement screen: a review. J Strength Cond Res (2014) 0.91
Comparative evaluation of a novel measurement tool to assess lumbar spine posture and range of motion. Eur Spine J (2012) 0.91
Lumbar spinal loads vary with body height and weight. Med Eng Phys (2012) 0.90
Monopolar spindle 1 (MPS1) kinase promotes production of closed MAD2 (C-MAD2) conformer and assembly of the mitotic checkpoint complex. J Biol Chem (2013) 0.90
Patellofemoral joint contact forces during activities with high knee flexion. J Orthop Res (2011) 0.90
Minimally disruptive decompression and transforaminal lumbar interbody fusion. Spine J (2006) 0.90
N-acetyltransferase 1 and 2 genotypes do not predict response or toxicity to treatment with mesalamine and sulfasalazine in patients with ulcerative colitis. Am J Gastroenterol (2002) 0.90
Lumbar diskectomy in a human-habituated mountain gorilla (Gorilla beringei beringei). Clin Neurol Neurosurg (2006) 0.88
On the evolutionary origin of the chaperonins. Proteins (2011) 0.88
A survey of formal methods for determining functional joint axes. J Biomech (2006) 0.88
The expression of proinflammatory cytokines and matrix metalloproteinases in the synovial membranes of patients with osteoarthritis compared with traumatic knee disorders. Arthroscopy (2010) 0.87
An enhanced and validated generic thoraco-lumbar spine model for prediction of muscle forces. Med Eng Phys (2011) 0.87
Testing homology with Contact Accepted mutatiOn (CAO): a contact-based Markov model of protein evolution. Comput Biol Chem (2003) 0.86
Distribution of bone mineral density with age and gender in the proximal tibia. Clin Biomech (Bristol, Avon) (2004) 0.86
Structure motif discovery and mining the PDB. Bioinformatics (2002) 0.86
Stair climbing results in more challenging patellofemoral contact mechanics and kinematics than walking at early knee flexion under physiological-like quadriceps loading. J Biomech (2009) 0.86
Exploring the limits of fold discrimination by structural alignment: a large scale benchmark using decoys of known fold. Comput Biol Chem (2011) 0.85
Threading using neural nEtwork (TUNE): the measure of protein sequence-structure compatibility. Bioinformatics (2002) 0.85
Amino acid encoding schemes from protein structure alignments: multi-dimensional vectors to describe residue types. J Theor Biol (2002) 0.85
Extreme levels of noise constitute a key neuromuscular deficit in the elderly. PLoS One (2012) 0.84
A hierarchic collision detection algorithm for simple Brownian dynamics. Comput Biol Chem (2010) 0.84
A review of lumbar spinal instrumentation: evidence and controversy. J Neurol Neurosurg Psychiatry (2011) 0.84
Kinetic and kinematic differences between deadlifts and goodmornings. BMC Sports Sci Med Rehabil (2013) 0.83
Analysis of mitotic phosphorylation of borealin. BMC Cell Biol (2007) 0.83
Biomechanical, microvascular, and cellular factors promote muscle and bone regeneration. Exerc Sport Sci Rev (2008) 0.83
Regulation of Borealin by phosphorylation at serine 219. J Cell Biochem (2010) 0.82
Velocity of lordosis angle during spinal flexion and extension. PLoS One (2012) 0.82
Effect of fatigue on force fluctuations in knee extensors in young adults. Philos Trans A Math Phys Eng Sci (2010) 0.82
Borealin is repressed in response to p53/Rb signaling. Cell Biol Int (2007) 0.82
In vivo spinal posture during upright and reclined sitting in an office chair. Biomed Res Int (2013) 0.82
Modulation of the relationship between external knee adduction moments and medial joint contact forces across subjects and activities. Arthritis Rheumatol (2014) 0.82
Surgical approach influences periprosthetic femoral bone density. Clin Orthop Relat Res (2005) 0.81
Protein fold comparison by the alignment of topological strings. Protein Eng (2003) 0.81
Collateral ligament length change patterns after joint line elevation may not explain midflexion instability following TKA. Med Eng Phys (2011) 0.81
Nanopore-based assay for detection of methylation in double-stranded DNA fragments. ACS Nano (2015) 0.81
Modulation of matrix metalloprotease-2 levels by mechanical loading of three-dimensional mesenchymal stem cell constructs: impact on in vitro tube formation. Tissue Eng Part A (2010) 0.81
Nerve injury to the posterior rami medial branch during the insertion of pedicle screws: comparison of mini-open versus percutaneous pedicle screw insertion techniques. Spine (Phila Pa 1976) (2009) 0.81
Generic rules of mechano-regulation combined with subject specific loading conditions can explain bone adaptation after THA. PLoS One (2012) 0.80
Protein structures, folds and fold spaces. J Phys Condens Matter (2009) 0.80
Re-evaluating the "rules" of protein topology. J Comput Biol (2010) 0.80
The SCoRE residual: a quality index to assess the accuracy of joint estimations. J Biomech (2011) 0.80
Joint angles of the ankle, knee, and hip and loading conditions during split squats. J Appl Biomech (2013) 0.80
Automated intraoperative EMG testing during percutaneous pedicle screw placement. Spine J (2005) 0.79
Influence of prosthesis design and implantation technique on implant stresses after cementless revision THR. J Orthop Surg Res (2011) 0.79
Functional site prediction selects correct protein models. BMC Bioinformatics (2008) 0.79
Modelling zinc-binding proteins with GADGET: genetic algorithm and distance geometry for exploring topology. J Mol Biol (2003) 0.79
Protein model refinement using structural fragment tessellation. Comput Biol Chem (2006) 0.79
DNA Methylation and Mutation of Small Colonic Neoplasms in Ulcerative Colitis and Crohn's Colitis: Implications for Surveillance. Inflamm Bowel Dis (2016) 0.78
Coarse-grained simulation of myosin-V movement. Comput Math Methods Med (2012) 0.78
Methylated eyes absent 4 (EYA4) gene promotor in non-neoplastic mucosa of ulcerative colitis patients with colorectal cancer: evidence for a field effect. Inflamm Bowel Dis (2013) 0.78
Gene expression microarrays. Methods Mol Med (2003) 0.78
The weighted optimal common shape technique improves identification of the hip joint center of rotation in vivo. J Orthop Res (2011) 0.78
Use of a resorbable sheet in iliac crest reconstruction in a sheep model. Orthopedics (2002) 0.78
Stool methylated DNA markers decrease following colorectal cancer resection--implications for surveillance. Dig Dis Sci (2014) 0.78
Investigating the role of Aurora kinases in RAS signaling. J Cell Biochem (2009) 0.77
Stabilization of anterior cervical spine with bioabsorbable polymer in one- and two-level fusions. Neurosurgery (2004) 0.77
Effects of phosphatase and proteasome inhibitors on Borealin phosphorylation and degradation. J Biochem (2012) 0.77
Temporal but not spatial variability during gait is reduced after selective dorsal rhizotomy in children with cerebral palsy. PLoS One (2013) 0.76
Analytic markovian rates for generalized protein structure evolution. PLoS One (2012) 0.76