PubRank

Edward C Holmes

Author PubWeight™ 390.10‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 A metagenomic survey of microbes in honey bee colony collapse disorder. Science 2007 11.72
2 The genomic and epidemiological dynamics of human influenza A virus. Nature 2008 10.26
3 Unifying the epidemiological and evolutionary dynamics of pathogens. Science 2004 8.33
4 Rates of evolutionary change in viruses: patterns and determinants. Nat Rev Genet 2008 6.79
5 Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis. J Mol Evol 2002 5.24
6 Immune selection for altered antigen processing leads to cytotoxic T lymphocyte escape in chronic HIV-1 infection. J Exp Med 2004 4.52
7 Cross-species virus transmission and the emergence of new epidemic diseases. Microbiol Mol Biol Rev 2008 4.46
8 The causes and consequences of HIV evolution. Nat Rev Genet 2004 4.34
9 The evolutionary genetics and emergence of avian influenza viruses in wild birds. PLoS Pathog 2008 4.17
10 The evolution of epidemic influenza. Nat Rev Genet 2007 4.12
11 New world bats harbor diverse influenza A viruses. PLoS Pathog 2013 4.10
12 Host species barriers to influenza virus infections. Science 2006 3.94
13 Stochastic processes are key determinants of short-term evolution in influenza a virus. PLoS Pathog 2006 3.82
14 Selection-driven evolution of emergent dengue virus. Mol Biol Evol 2003 3.27
15 Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918. PLoS Pathog 2008 3.25
16 Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nat Genet 2012 3.22
17 Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates. J Virol 2010 3.18
18 Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus. Biol Direct 2006 3.18
19 Population structure and evolution of the Bacillus cereus group. J Bacteriol 2004 3.08
20 A single positively selected West Nile viral mutation confers increased virogenesis in American crows. Nat Genet 2007 3.02
21 High rate of viral evolution associated with the emergence of carnivore parvovirus. Proc Natl Acad Sci U S A 2004 2.83
22 Trends in patterns of dengue transmission over 4 years in a pediatric cohort study in Nicaragua. J Infect Dis 2010 2.80
23 Phylogenetic relationships and differential selection pressures among genotypes of dengue-2 virus. Virology 2002 2.75
24 Genomic epidemiology of a dengue virus epidemic in urban Singapore. J Virol 2009 2.74
25 Ancient co-speciation of simian foamy viruses and primates. Nature 2005 2.71
26 The genesis and spread of reassortment human influenza A/H3N2 viruses conferring adamantane resistance. Mol Biol Evol 2007 2.59
27 Recombination in evolutionary genomics. Annu Rev Genet 2002 2.54
28 Phylogenetic analysis reveals the global migration of seasonal influenza A viruses. PLoS Pathog 2007 2.52
29 Distribution of surface protein variants among hyperinvasive meningococci: implications for vaccine design. Infect Immun 2004 2.44
30 Invasion and maintenance of dengue virus type 2 and type 4 in the Americas. J Virol 2005 2.44
31 Long-term transmission of defective RNA viruses in humans and Aedes mosquitoes. Science 2006 2.43
32 Phylogenetic analysis reveals a low rate of homologous recombination in negative-sense RNA viruses. J Gen Virol 2003 2.43
33 The molecular epidemiology of dengue virus serotype 4 in Bangkok, Thailand. Virology 2004 2.42
34 Avian influenza virus exhibits rapid evolutionary dynamics. Mol Biol Evol 2006 2.41
35 Clade replacements in dengue virus serotypes 1 and 3 are associated with changing serotype prevalence. J Virol 2005 2.35
36 Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution. Mol Biol Evol 2007 2.34
37 The population genetics and evolutionary epidemiology of RNA viruses. Nat Rev Microbiol 2004 2.26
38 The origin and phylogeography of dog rabies virus. J Gen Virol 2008 2.23
39 Emergence of the Asian 1 genotype of dengue virus serotype 2 in viet nam: in vivo fitness advantage and lineage replacement in South-East Asia. PLoS Negl Trop Dis 2010 2.17
40 Inferring the rate and time-scale of dengue virus evolution. Mol Biol Evol 2003 2.11
41 Molecular epidemiology of A/H3N2 and A/H1N1 influenza virus during a single epidemic season in the United States. PLoS Pathog 2008 2.09
42 Molecular evolution of dengue 2 virus in Puerto Rico: positive selection in the viral envelope accompanies clade reintroduction. J Gen Virol 2006 2.07
43 The extent of codon usage bias in human RNA viruses and its evolutionary origin. Virus Res 2003 2.06
44 Temporally structured metapopulation dynamics and persistence of influenza A H3N2 virus in humans. Proc Natl Acad Sci U S A 2011 2.06
45 Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence. Mol Biol Evol 2008 2.04
46 Global distribution of novel rhinovirus genotype. Emerg Infect Dis 2008 2.03
47 Why do RNA viruses recombine? Nat Rev Microbiol 2011 2.02
48 Genetic characterization of tick-borne flaviviruses: new insights into evolution, pathogenetic determinants and taxonomy. Virology 2006 2.01
49 Evolutionary history and dynamics of dog rabies virus in western and central Africa. J Gen Virol 2009 1.98
50 Genomic diversity and evolution of the lyssaviruses. PLoS One 2008 1.98
51 Sustained transmission of dengue virus type 1 in the Pacific due to repeated introductions of different Asian strains. Virology 2004 1.94
52 Bats are a major natural reservoir for hepaciviruses and pegiviruses. Proc Natl Acad Sci U S A 2013 1.93
53 Mixed infection and the genesis of influenza virus diversity. J Virol 2009 1.88
54 Endemic dengue associated with the co-circulation of multiple viral lineages and localized density-dependent transmission. PLoS Pathog 2011 1.87
55 Fever from the forest: prospects for the continued emergence of sylvatic dengue virus and its impact on public health. Nat Rev Microbiol 2011 1.86
56 Host and viral features of human dengue cases shape the population of infected and infectious Aedes aegypti mosquitoes. Proc Natl Acad Sci U S A 2013 1.84
57 The evolutionary dynamics of human influenza B virus. J Mol Evol 2008 1.84
58 Phylodynamics and human-mediated dispersal of a zoonotic virus. PLoS Pathog 2010 1.83
59 Phylogenetic evidence for adaptive evolution of dengue viruses in nature. J Gen Virol 2002 1.82
60 Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses. Mol Biol Evol 2010 1.80
61 Different evolutionary trajectories of European avian-like and classical swine H1N1 influenza A viruses. J Virol 2009 1.79
62 Isolation of a new strain of the flavivirus cell fusing agent virus in a natural mosquito population from Puerto Rico. J Gen Virol 2006 1.79
63 A tick-borne segmented RNA virus contains genome segments derived from unsegmented viral ancestors. Proc Natl Acad Sci U S A 2014 1.75
64 Intra- and interhost evolutionary dynamics of equine influenza virus. J Virol 2010 1.75
65 RNA viruses in hymenopteran pollinators: evidence of inter-Taxa virus transmission via pollen and potential impact on non-Apis hymenopteran species. PLoS One 2010 1.73
66 The hepatitis C virus epidemic among injecting drug users. Infect Genet Evol 2005 1.70
67 Phylogenetic evidence for rapid rates of molecular evolution in the single-stranded DNA begomovirus tomato yellow leaf curl virus. J Virol 2007 1.68
68 Spatial dynamics of human-origin H1 influenza A virus in North American swine. PLoS Pathog 2011 1.68
69 Origins, evolution, and vector/host coadaptations within the genus Flavivirus. Adv Virus Res 2003 1.65
70 Comparative analysis reveals frequent recombination in the parvoviruses. J Gen Virol 2007 1.64
71 Loss of viral control in early HIV-1 infection is temporally associated with sequential escape from CD8+ T cell responses and decrease in HIV-1-specific CD4+ and CD8+ T cell frequencies. J Infect Dis 2004 1.64
72 Evolution of novel reassortant A/H3N2 influenza viruses in North American swine and humans, 2009-2011. J Virol 2012 1.64
73 Homologous recombination is very rare or absent in human influenza A virus. J Virol 2008 1.63
74 Reduced positive selection in vector-borne RNA viruses. Mol Biol Evol 2002 1.62
75 Phylogenetic evidence for frequent positive selection and recombination in the meningococcal surface antigen PorB. Mol Biol Evol 2002 1.60
76 Out of Africa: a molecular perspective on the introduction of yellow fever virus into the Americas. PLoS Pathog 2007 1.60
77 Phylogeny and origins of hantaviruses harbored by bats, insectivores, and rodents. PLoS Pathog 2013 1.58
78 Selection for robustness in mutagenized RNA viruses. PLoS Genet 2007 1.58
79 A revised evolutionary history of hepatitis B virus (HBV). J Mol Evol 2002 1.57
80 Evolutionary basis of codon usage and nucleotide composition bias in vertebrate DNA viruses. J Mol Evol 2006 1.56
81 Global transmission of influenza viruses from humans to swine. J Gen Virol 2012 1.55
82 Gene flow and competitive exclusion of avian influenza A virus in natural reservoir hosts. Virology 2009 1.54
83 Evolutionary processes among sylvatic dengue type 2 viruses. J Virol 2007 1.54
84 The evolutionary and epidemiological dynamics of the paramyxoviridae. J Mol Evol 2008 1.53
85 Isolation of a novel species of flavivirus and a new strain of Culex flavivirus (Flaviviridae) from a natural mosquito population in Uganda. J Gen Virol 2009 1.53
86 The evolution of large DNA viruses: combining genomic information of viruses and their hosts. Trends Microbiol 2004 1.52
87 Phylogeography of recently emerged DENV-2 in southern Viet Nam. PLoS Negl Trop Dis 2010 1.52
88 Comparative population dynamics of HIV-1 subtypes B and C: subtype-specific differences in patterns of epidemic growth. Infect Genet Evol 2004 1.52
89 Phylogeography, population dynamics, and molecular evolution of European bat lyssaviruses. J Virol 2005 1.51
90 Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds. Ecol Lett 2011 1.49
91 Positively charged amino acid substitutions in the e2 envelope glycoprotein are associated with the emergence of venezuelan equine encephalitis virus. J Virol 2002 1.49
92 Phylogeography and evolutionary history of reassortant H9N2 viruses with potential human health implications. J Virol 2011 1.48
93 The genomic rate of molecular adaptation of the human influenza A virus. Mol Biol Evol 2011 1.48
94 Is the quasispecies concept relevant to RNA viruses? J Virol 2002 1.48
95 Lineage extinction and replacement in dengue type 1 virus populations are due to stochastic events rather than to natural selection. Virology 2005 1.45
96 Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance. J Infect Dis 2011 1.45
97 The extent of homologous recombination in members of the genus Flavivirus. J Gen Virol 2003 1.45
98 Phylogenetic evidence for the rapid evolution of human B19 erythrovirus. J Virol 2006 1.45
99 Structure and age of genetic diversity of dengue virus type 2 in Thailand. J Gen Virol 2006 1.43
100 Evidence for differing evolutionary dynamics of A/H5N1 viruses among countries applying or not applying avian influenza vaccination in poultry. Vaccine 2011 1.39
101 Declining growth rate of West Nile virus in North America. J Virol 2006 1.39
102 Origin and phylodynamics of rabbit hemorrhagic disease virus. J Virol 2009 1.38
103 Evolution of an Eurasian avian-like influenza virus in naïve and vaccinated pigs. PLoS Pathog 2012 1.36
104 High rates of molecular evolution in hantaviruses. Mol Biol Evol 2008 1.34
105 Molecular evolution of the insect-specific flaviviruses. J Gen Virol 2011 1.34
106 The evolutionary history and dynamics of bat rabies virus. Infect Genet Evol 2006 1.32
107 Evolutionary dynamics of human and avian metapneumoviruses. J Gen Virol 2008 1.32
108 Hitchhiking and the population genetic structure of avian influenza virus. J Mol Evol 2009 1.31
109 Microevolution of Dengue viruses circulating among primary school children in Kamphaeng Phet, Thailand. J Virol 2008 1.31
110 Validation of high rates of nucleotide substitution in geminiviruses: phylogenetic evidence from East African cassava mosaic viruses. J Gen Virol 2009 1.30
111 Long-term evolution of the Luteoviridae: time scale and mode of virus speciation. J Virol 2010 1.29
112 Diverse dengue type 2 virus populations contain recombinant and both parental viruses in a single mosquito host. J Virol 2003 1.29
113 Dengue virus serotype 2 from a sylvatic lineage isolated from a patient with dengue hemorrhagic fever. PLoS Negl Trop Dis 2009 1.28
114 Intrahost evolutionary dynamics of canine influenza virus in naive and partially immune dogs. J Virol 2010 1.28
115 Family level phylogenies reveal modes of macroevolution in RNA viruses. Proc Natl Acad Sci U S A 2010 1.28
116 Evolutionary conservation of the PA-X open reading frame in segment 3 of influenza A virus. J Virol 2012 1.27
117 Frequent inter-species transmission and geographic subdivision in avian influenza viruses from wild birds. Virology 2008 1.27
118 Population genetic estimation of the loss of genetic diversity during horizontal transmission of HIV-1. BMC Evol Biol 2006 1.27
119 Genomics and evolution of Aedes-borne flaviviruses. J Gen Virol 2009 1.26
120 Bayesian estimates of the evolutionary rate and age of hepatitis B virus. J Mol Evol 2007 1.25
121 High-resolution phylogenetic analysis of hepatitis C virus adaptation and its relationship to disease progression. J Virol 2004 1.25
122 Phylogeography of the spring and fall waves of the H1N1/09 pandemic influenza virus in the United States. J Virol 2010 1.23
123 A phylogenetic method for detecting positive epistasis in gene sequences and its application to RNA virus evolution. Mol Biol Evol 2006 1.23
124 Phylogenetic analysis reveals the emergence, evolution and dispersal of carnivore parvoviruses. J Gen Virol 2008 1.22
125 Evolutionary history and attenuation of myxoma virus on two continents. PLoS Pathog 2012 1.22
126 The origin and global emergence of adamantane resistant A/H3N2 influenza viruses. Virology 2009 1.21
127 Unique acquisition of cytotoxic T-lymphocyte escape mutants in infant human immunodeficiency virus type 1 infection. J Virol 2005 1.20
128 Insights into the evolutionary history of an emerging livestock pathogen: porcine circovirus 2. J Virol 2009 1.19
129 Reassortment events among swine influenza A viruses in China: implications for the origin of the 2009 influenza pandemic. J Virol 2011 1.19
130 Contrasting the epidemiological and evolutionary dynamics of influenza spatial transmission. Philos Trans R Soc Lond B Biol Sci 2013 1.17
131 Evolutionary dynamics of multiple sublineages of H5N1 influenza viruses in Nigeria from 2006 to 2008. J Virol 2010 1.16
132 Multiple recombinant dengue type 1 viruses in an isolate from a dengue patient. J Gen Virol 2007 1.16
133 Second-pandemic strain of Vibrio cholerae from the Philadelphia cholera outbreak of 1849. N Engl J Med 2014 1.16
134 Epidemiological dynamics and phylogeography of influenza virus in southern China. J Infect Dis 2012 1.16
135 Application of broad-spectrum resequencing microarray for genotyping rhabdoviruses. J Virol 2010 1.16
136 Genome-scale evolution and phylodynamics of equine H3N8 influenza A virus. J Virol 2011 1.16
137 The role of selection in shaping diversity of natural M. tuberculosis populations. PLoS Pathog 2013 1.15
138 Transmission of equine influenza virus during an outbreak is characterized by frequent mixed infections and loose transmission bottlenecks. PLoS Pathog 2012 1.14
139 High-resolution analysis of intrahost genetic diversity in dengue virus serotype 1 infection identifies mixed infections. J Virol 2011 1.14
140 Sequence analysis of in vivo defective interfering-like RNA of influenza A H1N1 pandemic virus. J Virol 2013 1.12
141 Guidelines for identifying homologous recombination events in influenza A virus. PLoS One 2010 1.12
142 Presence of oseltamivir-resistant pandemic A/H1N1 minor variants before drug therapy with subsequent selection and transmission. J Infect Dis 2012 1.12
143 Mitochondrial markers for molecular identification of Aedes mosquitoes (Diptera: Culicidae) involved in transmission of arboviral disease in West Africa. J Med Entomol 2005 1.12
144 Phylogenetic profiles reveal evolutionary relationships within the "twilight zone" of sequence similarity. Proc Natl Acad Sci U S A 2008 1.11
145 Emergence of a highly pathogenic avian influenza virus from a low-pathogenic progenitor. J Virol 2014 1.10
146 Social networks shape the transmission dynamics of hepatitis C virus. PLoS One 2010 1.10
147 Sexual transmission of single human immunodeficiency virus type 1 virions encoding highly polymorphic multisite cytotoxic T-lymphocyte escape variants. J Virol 2005 1.10
148 Systematic phylogenetic analysis of influenza A virus reveals many novel mosaic genome segments. Infect Genet Evol 2013 1.09
149 Frequent cross-species transmission of parvoviruses among diverse carnivore hosts. J Virol 2012 1.07
150 Evolution of dengue virus in Mexico is characterized by frequent lineage replacement. Arch Virol 2010 1.06
151 Inferring the timescale of dengue virus evolution under realistic models of DNA substitution. J Mol Evol 2007 1.06
152 Role of multiple hosts in the cross-species transmission and emergence of a pandemic parvovirus. J Virol 2011 1.06
153 Diversity and origin of dengue virus serotypes 1, 2, and 3, Bhutan. Emerg Infect Dis 2009 1.06
154 The emergence of rotavirus G12 and the prevalence of enteric viruses in hospitalized pediatric diarrheal patients in southern Vietnam. Am J Trop Med Hyg 2011 1.05
155 Heading off an influenza pandemic. Science 2005 1.04
156 JC virus evolution and its association with human populations. J Virol 2006 1.04
157 Differing epidemiological dynamics of influenza B virus lineages in Guangzhou, southern China, 2009-2010. J Virol 2013 1.03
158 DengueInfo: A web portal to dengue information resources. Infect Genet Evol 2007 1.03
159 Increased positive selection pressure in persistent (SSPE) versus acute measles virus infections. J Gen Virol 2002 1.02
160 Microevolution of canine influenza virus in shelters and its molecular epidemiology in the United States. J Virol 2010 1.01
161 Polymorphisms in Nef associated with different clinical outcomes in HIV type 1 subtype C-infected children. AIDS Res Hum Retroviruses 2007 1.01
162 Endogenous lentiviruses in the ferret genome. J Virol 2012 1.00
163 The role of alternative genetic codes in viral evolution and emergence. J Theor Biol 2008 1.00
164 Yellow fever virus exhibits slower evolutionary dynamics than dengue virus. J Virol 2009 0.99
165 Within-host genetic diversity of endemic and emerging parvoviruses of dogs and cats. J Virol 2008 0.99
166 Cross-species transmission of honey bee viruses in associated arthropods. Virus Res 2013 0.99
167 Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic. J Virol 2010 0.99
168 Comparative population dynamics of mosquito-borne flaviviruses. Infect Genet Evol 2003 0.98
169 The role of evolutionary intermediates in the host adaptation of canine parvovirus. J Virol 2011 0.98
170 Discovery of diverse polyomaviruses in bats and the evolutionary history of the Polyomaviridae. J Gen Virol 2012 0.98
171 Evolution and phylogeography of the nonpathogenic calicivirus RCV-A1 in wild rabbits in Australia. J Virol 2010 0.97
172 Phylodynamic analysis of the emergence and epidemiological impact of transmissible defective dengue viruses. PLoS Pathog 2013 0.97
173 Kolente virus, a rhabdovirus species isolated from ticks and bats in the Republic of Guinea. J Gen Virol 2013 0.97
174 The complete nucleotide sequence of a New World simian foamy virus. Virology 2007 0.97
175 Genome scale evolution of myxoma virus reveals host-pathogen adaptation and rapid geographic spread. J Virol 2013 0.96
176 Identification of diverse full-length endogenous betaretroviruses in megabats and microbats. Retrovirology 2013 0.96
177 A molecular epidemiological study of Australian bat lyssavirus. J Gen Virol 2003 0.96
178 Identification of diverse groups of endogenous gammaretroviruses in mega- and microbats. J Gen Virol 2012 0.96
179 Molecular epidemiology and evolutionary dynamics of betanodavirus in southern Europe. Infect Genet Evol 2011 0.96
180 Rapid evolutionary dynamics of zucchini yellow mosaic virus. J Gen Virol 2008 0.95
181 Endogenous RNA viruses of plants in insect genomes. Virology 2012 0.95
182 Epidemiology: Sexual transmission of HIV in Africa. Nature 2003 0.95
183 Genomic reassortment of influenza A virus in North American swine, 1998-2011. J Gen Virol 2012 0.95
184 The evolutionary dynamics of bluetongue virus. J Mol Evol 2010 0.94
185 Ngoye virus: a novel evolutionary lineage within the genus Flavivirus. J Gen Virol 2006 0.94
186 Phylodynamics of H5N1 avian influenza virus in Indonesia. Mol Ecol 2012 0.94
187 Niakha virus: a novel member of the family Rhabdoviridae isolated from phlebotomine sandflies in Senegal. Virology 2013 0.94
188 Distinct patterns of natural selection in the reverse transcriptase gene of HIV-1 in the presence and absence of antiretroviral therapy. Virology 2004 0.94
189 The spread of type 2 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) in North America: a phylogeographic approach. Virology 2013 0.93
190 Frequent in-migration and highly focal transmission of dengue viruses among children in Kamphaeng Phet, Thailand. PLoS Negl Trop Dis 2013 0.93
191 Multiple introductions of the Old World begomovirus Tomato yellow leaf curl virus into the New World. Appl Environ Microbiol 2007 0.93
192 Inferring the inter-host transmission of influenza A virus using patterns of intra-host genetic variation. Proc Biol Sci 2012 0.92
193 Dengue virus in sub-tropical northern and central Viet Nam: population immunity and climate shape patterns of viral invasion and maintenance. PLoS Negl Trop Dis 2013 0.92
194 Dengue virus type 3, Cuba, 2000-2002. Emerg Infect Dis 2005 0.92
195 Evolution of equine influenza virus in vaccinated horses. J Virol 2013 0.92
196 Arboretum and Puerto Almendras viruses: two novel rhabdoviruses isolated from mosquitoes in Peru. J Gen Virol 2014 0.92
197 The effect of gene overlapping on the rate of RNA virus evolution. Mol Biol Evol 2013 0.92
198 Multiyear persistence of 2 pandemic A/H1N1 influenza virus lineages in West Africa. J Infect Dis 2014 0.92
199 Recombination is associated with an outbreak of novel highly pathogenic porcine reproductive and respiratory syndrome viruses in China. J Virol 2013 0.91
200 Selection pressures in the capsid genes of plant RNA viruses reflect mode of transmission. J Gen Virol 2004 0.91
201 The introduction of fox rabies into Italy (2008-2011) was due to two viral genetic groups with distinct phylogeographic patterns. Infect Genet Evol 2013 0.91
202 Novel non-parametric models to estimate evolutionary rates and divergence times from heterochronous sequence data. BMC Evol Biol 2014 0.90
203 Adaptive evolution of bat dipeptidyl peptidase 4 (dpp4): implications for the origin and emergence of Middle East respiratory syndrome coronavirus. Virol J 2013 0.90
204 Intrapatient escape in the A*0201-restricted epitope SLYNTVATL drives evolution of human immunodeficiency virus type 1 at the population level. J Virol 2005 0.90
205 Random codon re-encoding induces stable reduction of replicative fitness of Chikungunya virus in primate and mosquito cells. PLoS Pathog 2013 0.90
206 Phylogenetic analysis reveals rapid evolutionary dynamics in the plant RNA virus genus tobamovirus. J Mol Evol 2010 0.89
207 Demographic histories of ERV-K in humans, chimpanzees and rhesus monkeys. PLoS One 2007 0.89
208 Comparative analysis reveals no consistent association between the secondary structure of the 3'-untranslated region of dengue viruses and disease syndrome. J Gen Virol 2006 0.88
209 Extremely rapid spread of human immunodeficiency virus type 1 BF recombinants in Argentina. J Virol 2006 0.88
210 Extensive diversity of Rickettsiales bacteria in two species of ticks from China and the evolution of the Rickettsiales. BMC Evol Biol 2014 0.87
211 Global rinderpest eradication: lessons learned and why humans should celebrate too. J Infect Dis 2011 0.86
212 Sylvatic dengue viruses share the pathogenic potential of urban/endemic dengue viruses. J Virol 2010 0.86
213 An allometric relationship between the genome length and virion volume of viruses. J Virol 2014 0.86
214 Clinical intervention and molecular characteristics of a dengue hemorrhagic fever outbreak in Timor Leste, 2005. Am J Trop Med Hyg 2007 0.85
215 Comparative analysis of the complete genome sequence of the California MSW strain of myxoma virus reveals potential host adaptations. J Virol 2013 0.85
216 Malaria: The gorilla connection. Nature 2010 0.84
217 Spatial but not temporal co-divergence of a virus and its mammalian host. Mol Ecol 2011 0.84
218 Low frequency of paleoviral infiltration across the avian phylogeny. Genome Biol 2014 0.83
219 PHYRN: a robust method for phylogenetic analysis of highly divergent sequences. PLoS One 2012 0.83
220 Endogenous hepadnaviruses in the genome of the budgerigar (Melopsittacus undulatus) and the evolution of avian hepadnaviruses. J Virol 2012 0.83
221 Viral respiratory infections among Hajj pilgrims in 2013. Virol Sin 2014 0.83
222 Malpais spring virus is a new species in the genus vesiculovirus. Virol J 2013 0.82
223 The "pressure pan" evolution of human erythrovirus B19 in the Amazon, Brazil. Virology 2007 0.82
224 No evidence for intra-segment recombination of 2009 H1N1 influenza virus in swine. Gene 2011 0.81
225 The recombinant origin of emerging human norovirus GII.4/2008: intra-genotypic exchange of the capsid P2 domain. J Gen Virol 2012 0.81
226 Gene duplication is infrequent in the recent evolutionary history of RNA viruses. Mol Biol Evol 2013 0.81
227 Bayesian coalescent analysis reveals a high rate of molecular evolution in GB virus C. J Mol Evol 2008 0.81
228 Highly Divergent Dengue Virus Type 2 in Traveler Returning from Borneo to Australia. Emerg Infect Dis 2016 0.80
229 Molecular evolutionary dynamics of Ross River virus and implications for vaccine efficacy. J Gen Virol 2009 0.80
230 Evolution of bovine ephemeral fever virus in the Australian episystem. J Virol 2013 0.80
231 Boosting virology in Brazil. PLoS Biol 2008 0.80
232 Rapid turnover of intra-host genetic diversity in Zucchini yellow mosaic virus. Virus Res 2010 0.80
233 Genomics: Plague's progress. Nature 2011 0.80
234 Co-circulation and persistence of genetically distinct saffold viruses, Denmark. Emerg Infect Dis 2012 0.80
235 Sequence analysis of the equid herpesvirus 2 chemokine receptor homologues E1, ORF74 and E6 demonstrates high sequence divergence between field isolates. J Gen Virol 2007 0.79
236 Ongoing spillover of Hantaan and Gou hantaviruses from rodents is associated with hemorrhagic fever with renal syndrome (HFRS) in China. PLoS Negl Trop Dis 2013 0.79
237 The transferrin receptor genes of Trypanosoma equiperdum are less diverse in their transferrin binding site than those of the broad-host range Trypanosoma brucei. J Mol Evol 2003 0.78
238 Does hepatitis C virus really form quasispecies? Infect Genet Evol 2010 0.78
239 Invited commentary: Evaluating vaccination programs using genetic sequence data. Am J Epidemiol 2009 0.78
240 Reemergence and Autochthonous Transmission of Dengue Virus, Eastern China, 2014. Emerg Infect Dis 2015 0.78
241 Phylogeography of Influenza A(H3N2) Virus in Peru, 2010-2012. Emerg Infect Dis 2015 0.77
242 Ancient invasion of an extinct gammaretrovirus in cetaceans. Virology 2013 0.77
243 Persistence of multiple genetic lineages within intrahost populations of Ross River virus. J Virol 2011 0.77
244 Emerging Rabbit Hemorrhagic Disease Virus 2 (RHDVb), Australia. Emerg Infect Dis 2015 0.77
245 Evidence for an endogenous papillomavirus-like element in the platypus genome. J Gen Virol 2012 0.77
246 Gene duplication and phylogeography of North American members of the Hart Park serogroup of avian rhabdoviruses. Virology 2013 0.76
247 Level of gene expression is a major determinant of protein evolution in the viral order Mononegavirales. J Virol 2012 0.76
248 On being the right size. Nat Genet 2005 0.76
249 Detection of TT virus among chimpanzees in the wild using a noninvasive technique. J Wildl Dis 2004 0.75
250 Spread of Canine Influenza A(H3N2) Virus, United States. Emerg Infect Dis 2017 0.75
251 Francisella tularensis ssp. holarctica in Ringtail Possums, Australia. Emerg Infect Dis 2017 0.75