Published in J Phys Chem B on April 06, 2006
Protein folding studied by single-molecule FRET. Curr Opin Struct Biol (2008) 4.33
Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations. Proc Natl Acad Sci U S A (2007) 2.65
Shot-noise limited single-molecule FRET histograms: comparison between theory and experiments. J Phys Chem B (2006) 2.58
Photophysics of fluorescent probes for single-molecule biophysics and super-resolution imaging. Annu Rev Phys Chem (2012) 2.19
Effect of flexibility and cis residues in single-molecule FRET studies of polyproline. Proc Natl Acad Sci U S A (2007) 1.81
A toolkit and benchmark study for FRET-restrained high-precision structural modeling. Nat Methods (2012) 1.56
Decoding the pattern of photon colors in single-molecule FRET. J Phys Chem B (2009) 1.54
Nucleosome disassembly intermediates characterized by single-molecule FRET. Proc Natl Acad Sci U S A (2009) 1.44
Silicon photon-counting avalanche diodes for single-molecule fluorescence spectroscopy. IEEE J Sel Top Quantum Electron (2014) 1.43
Defining the limits of single-molecule FRET resolution in TIRF microscopy. Biophys J (2010) 1.43
Substrate discrimination of the chaperone BiP by autonomous and cochaperone-regulated conformational transitions. Nat Struct Mol Biol (2011) 1.38
Probing polyproline structure and dynamics by photoinduced electron transfer provides evidence for deviations from a regular polyproline type II helix. Proc Natl Acad Sci U S A (2007) 1.37
Development of new photon-counting detectors for single-molecule fluorescence microscopy. Philos Trans R Soc Lond B Biol Sci (2012) 1.32
36 degrees step size of proton-driven c-ring rotation in FoF1-ATP synthase. EMBO J (2009) 1.32
Structural heterogeneity and quantitative FRET efficiency distributions of polyprolines through a hybrid atomistic simulation and Monte Carlo approach. PLoS One (2011) 1.16
Nonequilibrium single molecule protein folding in a coaxial mixer. Biophys J (2008) 1.09
Identifying molecular dynamics in single-molecule FRET experiments with burst variance analysis. Biophys J (2011) 1.08
Conformational landscapes of DNA polymerase I and mutator derivatives establish fidelity checkpoints for nucleotide insertion. Nat Commun (2013) 1.06
Acetylation of histone H3 at lysine 64 regulates nucleosome dynamics and facilitates transcription. Elife (2014) 1.01
Monovalent and divalent promoted GAAA tetraloop-receptor tertiary interactions from freely diffusing single-molecule studies. Biophys J (2008) 0.99
Calmodulin, conformational states, and calcium signaling. A single-molecule perspective. Biochemistry (2006) 0.99
Variational Bayes analysis of a photon-based hidden Markov model for single-molecule FRET trajectories. Biophys J (2012) 0.98
Quantifying heterogeneity and conformational dynamics from single molecule FRET of diffusing molecules: recurrence analysis of single particles (RASP). Phys Chem Chem Phys (2011) 0.98
The proton-translocating a subunit of F0F1-ATP synthase is allocated asymmetrically to the peripheral stalk. J Biol Chem (2008) 0.96
Single-molecule FRET experiments with a red-enhanced custom technology SPAD. Proc SPIE Int Soc Opt Eng (2013) 0.94
Single-molecule studies of the lysine riboswitch reveal effector-dependent conformational dynamics of the aptamer domain. Biochemistry (2012) 0.91
Theory of the energy transfer efficiency and fluorescence lifetime distribution in single-molecule FRET. Proc Natl Acad Sci U S A (2012) 0.89
Disentangling subpopulations in single-molecule FRET and ALEX experiments with photon distribution analysis. Biophys J (2012) 0.88
Single-molecule multiparameter fluorescence spectroscopy reveals directional MutS binding to mismatched bases in DNA. Nucleic Acids Res (2012) 0.87
Hsp90 regulates the dynamics of its cochaperone Sti1 and the transfer of Hsp70 between modules. Nat Commun (2015) 0.87
Probing complexes with single fluorophores: factors contributing to dispersion of FRET in DNA/RNA duplexes. Eur Biophys J (2008) 0.86
Single-molecule FRET of protein structure and dynamics - a primer. J Nanobiotechnology (2013) 0.85
FRETBursts: An Open Source Toolkit for Analysis of Freely-Diffusing Single-Molecule FRET. PLoS One (2016) 0.81
Conformational state distributions and catalytically relevant dynamics of a hinge-bending enzyme studied by single-molecule FRET and a coarse-grained simulation. Biophys J (2014) 0.81
Trends in fluorescence imaging and related techniques to unravel biological information. HFSP J (2007) 0.81
dNTP-dependent conformational transitions in the fingers subdomain of Klentaq1 DNA polymerase: insights into the role of the "nucleotide-binding" state. J Biol Chem (2013) 0.80
Spotlighting motors and controls of single FoF1-ATP synthase. Biochem Soc Trans (2013) 0.80
Classic maximum entropy recovery of the average joint distribution of apparent FRET efficiency and fluorescence photons for single-molecule burst measurements. J Phys Chem B (2012) 0.80
Effects of Hofmeister ions on the α-helical structure of proteins. Biophys J (2012) 0.80
Codon-dependent tRNA fluctuations monitored with fluorescence polarization. Biophys J (2010) 0.78
Studying DNA-protein interactions with single-molecule Förster resonance energy transfer. Protoplasma (2013) 0.78
BOBA FRET: bootstrap-based analysis of single-molecule FRET data. PLoS One (2013) 0.78
Conformational Selection and Submillisecond Dynamics of the Ligand-binding Domain of the N-Methyl-d-aspartate Receptor. J Biol Chem (2016) 0.77
Reconstruction of Calmodulin Single-Molecule FRET States, Dye-Interactions, and CaMKII Peptide Binding by MultiNest and Classic Maximum Entropy. Chem Phys (2013) 0.77
Periodic acceptor excitation spectroscopy of single molecules. Eur Biophys J (2007) 0.77
Probing protein multidimensional conformational fluctuations by single-molecule multiparameter photon stamping spectroscopy. J Phys Chem B (2014) 0.76
Recognition of the 3' splice site RNA by the U2AF heterodimer involves a dynamic population shift. Proc Natl Acad Sci U S A (2016) 0.76
A distribution-based method to resolve single-molecule Förster resonance energy transfer observations. J Chem Phys (2011) 0.75
Decoding Single Molecule Time Traces with Dynamic Disorder. PLoS Comput Biol (2016) 0.75
Single-Molecule FRET States, Conformational Interchange, and Conformational Selection by Dye Labels in Calmodulin. J Phys Chem B (2016) 0.75
Modification of förster resonance energy transfer efficiencyat interfaces. Int J Mol Sci (2012) 0.75
Determining serpin conformational distributions with single molecule fluorescence. Methods Enzymol (2011) 0.75
A Method for Extracting the Free Energy Surface and Conformational Dynamics of Fast-Folding Proteins from Single Molecule Photon Trajectories. J Phys Chem B (2015) 0.75
An in-vitro tag-and-modify protein sample generation method for singlemolecule FRET. J Biol Chem (2017) 0.75
Proton-powered subunit rotation in single membrane-bound F0F1-ATP synthase. Nat Struct Mol Biol (2004) 2.50
Moderation of Arabidopsis root stemness by CLAVATA1 and ARABIDOPSIS CRINKLY4 receptor kinase complexes. Curr Biol (2013) 2.06
Strategies to improve photostabilities in ultrasensitive fluorescence spectroscopy. J Phys Chem A (2007) 1.99
Molecular photobleaching kinetics of Rhodamine 6G by one- and two-photon induced confocal fluorescence microscopy. Chemphyschem (2005) 1.69
Stem cell signaling in Arabidopsis requires CRN to localize CLV2 to the plasma membrane. Plant Physiol (2009) 1.62
Accurate single-molecule FRET studies using multiparameter fluorescence detection. Methods Enzymol (2010) 1.62
Single-molecule FRET measures bends and kinks in DNA. Proc Natl Acad Sci U S A (2008) 1.58
A toolkit and benchmark study for FRET-restrained high-precision structural modeling. Nat Methods (2012) 1.56
Nucleosome disassembly intermediates characterized by single-molecule FRET. Proc Natl Acad Sci U S A (2009) 1.44
Analysis of photobleaching in single-molecule multicolor excitation and Förster resonance energy transfer measurements. J Phys Chem A (2006) 1.42
Accurate distance determination of nucleic acids via Förster resonance energy transfer: implications of dye linker length and rigidity. J Am Chem Soc (2011) 1.40
Single-molecule detection and identification of multiple species by multiparameter fluorescence detection. Anal Chem (2006) 1.38
The conformational dynamics of the mitochondrial Hsp70 chaperone. Mol Cell (2010) 1.26
Detecting protein-induced folding of the U4 snRNA kink-turn by single-molecule multiparameter FRET measurements. RNA (2005) 1.23
Structural heterogeneity and quantitative FRET efficiency distributions of polyprolines through a hybrid atomistic simulation and Monte Carlo approach. PLoS One (2011) 1.16
Detection of structural dynamics by FRET: a photon distribution and fluorescence lifetime analysis of systems with multiple states. J Phys Chem B (2010) 1.15
On the origin of broadening of single-molecule FRET efficiency distributions beyond shot noise limits. J Phys Chem B (2010) 1.10
Combining MFD and PIE for accurate single-pair Förster resonance energy transfer measurements. Chemphyschem (2012) 1.08
Probability distribution analysis of single-molecule fluorescence anisotropy and resonance energy transfer. J Phys Chem B (2007) 1.07
Luminescence quantum yield of single gold nanorods. Nano Lett (2012) 1.06
Characterizing multiple molecular States in single-molecule multiparameter fluorescence detection by probability distribution analysis. J Phys Chem B (2008) 1.02
The GTPase activity of murine guanylate-binding protein 2 (mGBP2) controls the intracellular localization and recruitment to the parasitophorous vacuole of Toxoplasma gondii. J Biol Chem (2012) 0.98
Orientational and dynamical heterogeneity of rhodamine 6G terminally attached to a DNA helix revealed by NMR and single-molecule fluorescence spectroscopy. J Am Chem Soc (2007) 0.95
Multiparameter fluorescence image spectroscopy to study molecular interactions. Photochem Photobiol Sci (2009) 0.94
Supertertiary structure of the synaptic MAGuK scaffold proteins is conserved. Proc Natl Acad Sci U S A (2012) 0.90
Impact of human autoantibodies on β1-adrenergic receptor conformation, activity, and internalization. Cardiovasc Res (2012) 0.88
Filtered FCS: species auto- and cross-correlation functions highlight binding and dynamics in biomolecules. Chemphyschem (2012) 0.88
Single-molecule multiparameter fluorescence spectroscopy reveals directional MutS binding to mismatched bases in DNA. Nucleic Acids Res (2012) 0.87
Fluorescence correlation spectroscopy, a tool to investigate supramolecular dynamics: inclusion complexes of pyronines with cyclodextrin. J Am Chem Soc (2005) 0.84
Triphosphate induced dimerization of human guanylate binding protein 1 involves association of the C-terminal helices: a joint double electron-electron resonance and FRET study. Biochemistry (2014) 0.84
Monitoring dynamic systems with multiparameter fluorescence imaging. Anal Bioanal Chem (2006) 0.82
Dye-exchange dynamics in micellar solutions studied by fluorescence correlation spectroscopy. J Phys Chem B (2007) 0.81
Dynamics of supramolecular association monitored by fluorescence correlation spectroscopy. Chemphyschem (2008) 0.80
dNTP-dependent conformational transitions in the fingers subdomain of Klentaq1 DNA polymerase: insights into the role of the "nucleotide-binding" state. J Biol Chem (2013) 0.80
Optical characteristics of atomic force microscopy tips for single-molecule fluorescence applications. Chemphyschem (2005) 0.79
Fluorescence detection with high time resolution: from optical microscopy to simultaneous force and fluorescence spectroscopy. Microsc Res Tech (2007) 0.79
Note: a 4 ns hardware photon correlator based on a general-purpose field-programmable gate array development board implemented in a compact setup for fluorescence correlation spectroscopy. Rev Sci Instrum (2012) 0.78
Diphenylhexatrienes as photoprotective agents for ultrasensitive fluorescence detection. J Phys Chem A (2010) 0.76
Temperature-cycle microscopy reveals single-molecule conformational heterogeneity. Phys Chem Chem Phys (2015) 0.75
Fluorophores as optical sensors for local forces. Chemphyschem (2009) 0.75
Analyzing Förster resonance energy transfer with fluctuation algorithms. Methods Enzymol (2013) 0.75
Combining Graphical and Analytical Methods with Molecular Simulations to Analyze Time-resolved FRET-measurements of Labeled Macromolecules Accurately. J Phys Chem B (2017) 0.75