Published in Environ Microbiol on April 01, 2006
Sponge-associated microorganisms: evolution, ecology, and biotechnological potential. Microbiol Mol Biol Rev (2007) 5.24
Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges. ISME J (2010) 1.66
Dynamics of genomic-library enrichment and identification of solvent tolerance genes for Clostridium acetobutylicum. Appl Environ Microbiol (2007) 1.47
Antiviral lead compounds from marine sponges. Mar Drugs (2010) 1.40
Vertical transmission of a phylogenetically complex microbial consortium in the viviparous sponge Ircinia felix. Appl Environ Microbiol (2007) 1.26
Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges. ISME J (2013) 1.18
Bacterial uptake by the marine sponge Aplysina aerophoba. Microb Ecol (2007) 1.11
Widespread occurrence and genomic context of unusually small polyketide synthase genes in microbial consortia associated with marine sponges. Appl Environ Microbiol (2007) 1.00
Lifestyle evolution in cyanobacterial symbionts of sponges. MBio (2015) 1.00
Genomic mining for novel FADH₂-dependent halogenases in marine sponge-associated microbial consortia. Mar Biotechnol (NY) (2012) 0.97
The candidate phylum Poribacteria by single-cell genomics: new insights into phylogeny, cell-compartmentation, eukaryote-like repeat proteins, and other genomic features. PLoS One (2014) 0.88
Biogeography and phylogenetic diversity of a cluster of exclusively marine myxobacteria. ISME J (2011) 0.85
Effects of sample handling and cultivation bias on the specificity of bacterial communities in keratose marine sponges. Front Microbiol (2014) 0.83
Phylogenetic screening of a bacterial, metagenomic library using homing endonuclease restriction and marker insertion. Nucleic Acids Res (2009) 0.82
Diversity of the candidate phylum Poribacteria in the marine sponge Aplysina fulva. Braz J Microbiol (2013) 0.78
An Enrichment of CRISPR and Other Defense-Related Features in Marine Sponge-Associated Microbial Metagenomes. Front Microbiol (2016) 0.76
Diversity and bioactive potentials of culturable heterotrophic bacteria from the surficial sediments of the Arabian Sea. 3 Biotech (2016) 0.75
Bacterial Diversity Associated with Cinachyra cavernosa and Haliclona pigmentifera, Cohabiting Sponges in the Coral Reef Ecosystem of Gulf of Mannar, Southeast Coast of India. PLoS One (2015) 0.75
Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization. ISME J (2017) 0.75
Genomic islands in pathogenic and environmental microorganisms. Nat Rev Microbiol (2004) 6.94
Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota. PLoS Biol (2006) 5.77
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling. Environ Microbiol (2005) 5.32
Animals in a bacterial world, a new imperative for the life sciences. Proc Natl Acad Sci U S A (2013) 5.03
Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS One (2008) 4.54
Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum. Proc Natl Acad Sci U S A (2006) 3.85
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol (2008) 3.34
Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proc Natl Acad Sci U S A (2011) 3.25
Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR. Environ Microbiol (2003) 3.08
Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends Microbiol (2010) 2.84
Acidobacteria form a coherent but highly diverse group within the bacterial domain: evidence from environmental genomics. Mol Microbiol (2003) 2.65
Assessing the complex sponge microbiota: core, variable and species-specific bacterial communities in marine sponges. ISME J (2011) 2.45
In vivo activity of CRISPR-mediated virus defence in a hyperthermophilic archaeon. Mol Microbiol (2011) 2.35
The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol (2011) 2.14
Discovery of the novel candidate phylum "Poribacteria" in marine sponges. Appl Environ Microbiol (2004) 2.13
Legionella pneumophila: an aquatic microbe goes astray. FEMS Microbiol Rev (2002) 2.07
Characterization of large-insert DNA libraries from soil for environmental genomic studies of Archaea. Environ Microbiol (2004) 2.02
Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils. Environ Microbiol (2009) 1.78
UV-inducible DNA exchange in hyperthermophilic archaea mediated by type IV pili. Mol Microbiol (2011) 1.71
Ammonia-oxidising Crenarchaeota: important players in the nitrogen cycle? Trends Microbiol (2006) 1.69
Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges. ISME J (2010) 1.66
Complex nitrogen cycling in the sponge Geodia barretti. Environ Microbiol (2009) 1.61
A reporter gene system for the hyperthermophilic archaeon Sulfolobus solfataricus based on a selectable and integrative shuttle vector. Mol Microbiol (2003) 1.48
Response of the hyperthermophilic archaeon Sulfolobus solfataricus to UV damage. J Bacteriol (2007) 1.46
Prokaryotic chromosomes and disease. Science (2003) 1.46
Nitrification in terrestrial hot springs of Iceland and Kamchatka. FEMS Microbiol Ecol (2008) 1.44
Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis. ISME J (2012) 1.43
Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba. Environ Microbiol (2008) 1.42
The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations. Environ Microbiol (2012) 1.42
Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen. Nat Commun (2013) 1.40
Diversity of Archaea in hypersaline environments characterized by molecular-phylogenetic and cultivation studies. Extremophiles (2002) 1.40
Molecular microbial diversity survey of sponge reproductive stages and mechanistic insights into vertical transmission of microbial symbionts. Appl Environ Microbiol (2008) 1.39
Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge. Proc Natl Acad Sci U S A (2012) 1.37
UV-inducible cellular aggregation of the hyperthermophilic archaeon Sulfolobus solfataricus is mediated by pili formation. Mol Microbiol (2008) 1.35
Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community. Environ Microbiol (2012) 1.32
Archaea in biogeochemical cycles. Annu Rev Microbiol (2013) 1.31
Homologues of nitrite reductases in ammonia-oxidizing archaea: diversity and genomic context. Environ Microbiol (2010) 1.30
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism. Environ Microbiol (2009) 1.27
Vertical transmission of a phylogenetically complex microbial consortium in the viviparous sponge Ircinia felix. Appl Environ Microbiol (2007) 1.26
From anti-fouling to biofilm inhibition: new cytotoxic secondary metabolites from two Indonesian Agelas sponges. Bioorg Med Chem (2010) 1.25
Regulation of expression of the arabinose and glucose transporter genes in the thermophilic archaeon Sulfolobus solfataricus. Extremophiles (2006) 1.24
Diversity and mode of transmission of ammonia-oxidizing archaea in marine sponges. Environ Microbiol (2007) 1.23
Anti-parasitic compounds from Streptomyces sp. strains isolated from Mediterranean sponges. Mar Drugs (2010) 1.22
First insight into the genome of an uncultivated crenarchaeote from soil. Environ Microbiol (2002) 1.20
Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges. ISME J (2013) 1.18
Elucidating the transcription cycle of the UV-inducible hyperthermophilic archaeal virus SSV1 by DNA microarrays. Virology (2007) 1.18
Isolation, phylogenetic analysis and anti-infective activity screening of marine sponge-associated actinomycetes. Mar Drugs (2010) 1.15
Diversity, abundance and natural products of marine sponge-associated actinomycetes. Nat Prod Rep (2014) 1.15
Bacterial uptake by the marine sponge Aplysina aerophoba. Microb Ecol (2007) 1.11
Widespread distribution of poribacteria in demospongiae. Appl Environ Microbiol (2009) 1.10
PKS and NRPS gene clusters from microbial symbiont cells of marine sponges by whole genome amplification. Environ Microbiol Rep (2009) 1.09
Ammonia-oxidizing archaea as main drivers of nitrification in cold-water sponges. Environ Microbiol (2011) 1.06
Nitrification rates in Arctic soils are associated with functionally distinct populations of ammonia-oxidizing archaea. ISME J (2013) 1.06
Specificity and transcriptional activity of microbiota associated with low and high microbial abundance sponges from the Red Sea. Mol Ecol (2013) 1.05
Responses of the terrestrial ammonia-oxidizing archaeon Ca. Nitrososphaera viennensis and the ammonia-oxidizing bacterium Nitrosospira multiformis to nitrification inhibitors. FEMS Microbiol Lett (2013) 1.02
CRISPR-mediated targeted mRNA degradation in the archaeon Sulfolobus solfataricus. Nucleic Acids Res (2014) 1.02
Widespread occurrence and genomic context of unusually small polyketide synthase genes in microbial consortia associated with marine sponges. Appl Environ Microbiol (2007) 1.00
Bacterial community profiles in low microbial abundance sponges. FEMS Microbiol Ecol (2012) 1.00
Linking chemical and microbial diversity in marine sponges: possible role for poribacteria as producers of methyl-branched fatty acids. Chembiochem (2010) 0.99
Sustainable production of bioactive compounds by sponges--cell culture and gene cluster approach: a review. Mar Biotechnol (NY) (2004) 0.99
Distribution of Crenarchaeota representatives in terrestrial hot springs of Russia and Iceland. Appl Environ Microbiol (2008) 0.99
Reductive dehalogenation of brominated phenolic compounds by microorganisms associated with the marine sponge Aplysina aerophoba. Appl Environ Microbiol (2003) 0.99
Phyllosphere bacterial communities of trichome-bearing and trichomeless Arabidopsis thaliana leaves. Antonie Van Leeuwenhoek (2011) 0.98
Unexpectedly broad target recognition of the CRISPR-mediated virus defence system in the archaeon Sulfolobus solfataricus. Nucleic Acids Res (2013) 0.98
Soaking it up: the complex lives of marine sponges and their microbial associates. ISME J (2007) 0.98
Genomic mining for novel FADH₂-dependent halogenases in marine sponge-associated microbial consortia. Mar Biotechnol (NY) (2012) 0.97
The pathology of sponge orange band disease affecting the Caribbean barrel sponge Xestospongia muta. FEMS Microbiol Ecol (2010) 0.97
ITS-2 and 18S rRNA gene phylogeny of Aplysinidae (Verongida, Demospongiae). J Mol Evol (2005) 0.96
Bioactive metabolites from the endophytic fungus Ampelomyces sp. isolated from the medicinal plant Urospermum picroides. Phytochemistry (2008) 0.95
Antioxidant and anti-protease activities of diazepinomicin from the sponge-associated Micromonospora strain RV115. Mar Drugs (2012) 0.95
The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries. Nat Rev Microbiol (2013) 0.94
Distinct phyllosphere bacterial communities on Arabidopsis wax mutant leaves. PLoS One (2013) 0.94
Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta-omics. Environ Microbiol (2013) 0.93
SulfoSYS (Sulfolobus Systems Biology): towards a silicon cell model for the central carbohydrate metabolism of the archaeon Sulfolobus solfataricus under temperature variation. Biochem Soc Trans (2009) 0.93
Quantitative and phylogenetic study of the Deep Sea Archaeal Group in sediments of the Arctic mid-ocean spreading ridge. Front Microbiol (2013) 0.93
Genetics. Evolutionary insights from sponges. Science (2007) 0.91
Sequestration of dietary alkaloids by the spongivorous marine mollusc Tylodina perversa. Z Naturforsch C (2003) 0.91
"Hot standards" for the thermoacidophilic archaeon Sulfolobus solfataricus. Extremophiles (2009) 0.91
Antimicrobial activities and matrix-assisted laser desorption/ionization mass spectrometry of Bacillus isolates from the marine sponge Aplysina aerophoba. Mar Biotechnol (NY) (2004) 0.90
Metagenomic analysis of ammonia-oxidizing archaea affiliated with the soil group. Front Microbiol (2012) 0.90
Seasonal and vertical distribution of putative ammonia-oxidizing thaumarchaeotal communities in an oligotrophic lake. FEMS Microbiol Ecol (2012) 0.87
CRISPR-mediated defense mechanisms in the hyperthermophilic archaeal genus Sulfolobus. RNA Biol (2013) 0.87
Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids of group I.1a and I.1b thaumarchaeota in soil. Appl Environ Microbiol (2012) 0.86
Integration of molecular functions at the ecosystemic level: breakthroughs and future goals of environmental genomics and post-genomics. Ecol Lett (2010) 0.86
Anti-protease and immunomodulatory activities of bacteria associated with Caribbean sponges. Mar Biotechnol (NY) (2011) 0.86
An environmental genomics perspective on the diversity and function of marine sponge-associated microbiota. Curr Opin Microbiol (2007) 0.85
A thaumarchaeal provirus testifies for an ancient association of tailed viruses with archaea. Biochem Soc Trans (2011) 0.85
Streptomyces axinellae sp. nov., isolated from the Mediterranean sponge Axinella polypoides (Porifera). Int J Syst Evol Microbiol (2009) 0.85
Exocellular cyclic dipeptides from a Ruegeria strain associated with cell cultures of Suberites domuncula. Mar Biotechnol (NY) (2003) 0.84
Revealing microbial functional activities in the Red Sea sponge Stylissa carteri by metatranscriptomics. Environ Microbiol (2014) 0.84
Meeting report: 1st international symposium on sponge microbiology. Mar Biotechnol (NY) (2011) 0.84
Preparation of high-molecular weight DNA and metagenomic libraries from soils and hot springs. Methods Enzymol (2011) 0.83
Detection of hemolytic bacteria from Palythoa caribaeorum (Cnidaria, Zoantharia) using a novel palytoxin-screening assay. Antonie Van Leeuwenhoek (2009) 0.83
Reactions to UV damage in the model archaeon Sulfolobus solfataricus. Biochem Soc Trans (2009) 0.83
Gene expression of lactobacilli in murine forestomach biofilms. Microb Biotechnol (2014) 0.83
Exploring symbioses by single-cell genomics. Biol Bull (2012) 0.82
Type I interferons have opposing effects during the emergence and recovery phases of colitis. Eur J Immunol (2014) 0.82
Microbial diversity of the freshwater sponge Spongilla lacustris. Microb Ecol (2005) 0.82