The discovery of labile methyl esters on proliferating cell nuclear antigen by MS/MS.

PubWeight™: 1.12‹?› | Rank: Top 10%

🔗 View Article (PMID 16888766)

Published in Proteomics on September 01, 2006

Authors

Derek J Hoelz1, Randy J Arnold, Lacey E Dobrolecki, Waleed Abdel-Aziz, Andrew P Loehrer, Milos V Novotny, Lauren Schnaper, Robert J Hickey, Linda H Malkas

Author Affiliations

1: Division of Hematology/Oncology, Department of Medicine, Indiana University School of Medicine, IN 46202, USA. dhoelz@iupui.edu

Articles citing this

Complications in the assignment of 14 and 28 Da mass shift detected by mass spectrometry as in vivo methylation from endogenous proteins. Anal Chem (2008) 1.19

Identification of X-DING-CD4, a new member of human DING protein family that is secreted by HIV-1 resistant CD4(+) T cells and has anti-viral activity. Biochem Biophys Res Commun (2009) 1.17

A cancer-associated PCNA expressed in breast cancer has implications as a potential biomarker. Proc Natl Acad Sci U S A (2006) 1.13

Interaction of estrogen receptor alpha with proliferating cell nuclear antigen. Nucleic Acids Res (2007) 1.01

The multifunctional poly(A)-binding protein (PABP) 1 is subject to extensive dynamic post-translational modification, which molecular modelling suggests plays an important role in co-ordinating its activities. Biochem J (2012) 0.93

Human C6orf211 encodes Armt1, a protein carboxyl methyltransferase that targets PCNA and is linked to the DNA damage response. Cell Rep (2015) 0.87

The Mechanism by Which MYCN Amplification Confers an Enhanced Sensitivity to a PCNA-Derived Cell Permeable Peptide in Neuroblastoma Cells. EBioMedicine (2015) 0.85

Elevated expression of cancer-associated proliferating cell nuclear antigen in high-grade prostatic intraepithelial neoplasia and prostate cancer. Prostate (2010) 0.84

Trigonella foenum (Fenugreek) Induced Apoptosis in Hepatocellular Carcinoma Cell Line, HepG2, Mediated by Upregulation of p53 and Proliferating Cell Nuclear Antigen. Biomed Res Int (2015) 0.83

A PCNA-derived cell permeable peptide selectively inhibits neuroblastoma cell growth. PLoS One (2014) 0.83

Nuclear protein isoforms: implications for cancer diagnosis and therapy. J Cell Biochem (2011) 0.81

A Peptide mimicking a region in proliferating cell nuclear antigen specific to key protein interactions is cytotoxic to breast cancer. Mol Pharmacol (2014) 0.77

Armt1: a phoenix rises from the ashes. Oncotarget (2015) 0.75

Mining proteomic data to expose protein modifications in Methanosarcina mazei strain Gö1. Front Microbiol (2015) 0.75

Validating the disruption of proliferating cell nuclear antigen interactions in the development of targeted cancer therapeutics. Cancer Biol Ther (2016) 0.75

DNA strand breaks and TDP-43 mislocation are absent in the murine hSOD1G93A model of amyotrophic lateral sclerosis in vivo and in vitro. PLoS One (2017) 0.75

Articles by these authors

Comparison of the methods for profiling glycoprotein glycans--HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study. Glycobiology (2007) 2.71

A renewable tissue resource of phenotypically stable, biologically and ethnically diverse, patient-derived human breast cancer xenograft models. Cancer Res (2013) 2.63

A computational approach toward label-free protein quantification using predicted peptide detectability. Bioinformatics (2006) 2.48

Alterations in the serum glycome due to metastatic prostate cancer. J Proteome Res (2007) 2.30

Solid-phase permethylation of glycans for mass spectrometric analysis. Rapid Commun Mass Spectrom (2005) 2.27

Breast cancer diagnosis and prognosis through quantitative measurements of serum glycan profiles. Clin Chem (2008) 1.96

Structural investigations of glycoconjugates at high sensitivity. Chem Rev (2002) 1.79

High-throughput solid-phase permethylation of glycans prior to mass spectrometry. Rapid Commun Mass Spectrom (2008) 1.74

Individual and gender fingerprints in human body odour. J R Soc Interface (2007) 1.65

Characterization of glycopeptides by combining collision-induced dissociation and electron-transfer dissociation mass spectrometry data. Rapid Commun Mass Spectrom (2009) 1.60

Development of high-sensitivity ion trap ion mobility spectrometry time-of-flight techniques: a high-throughput nano-LC-IMS-TOF separation of peptides arising from a Drosophila protein extract. Anal Chem (2003) 1.54

Detection of hepatocellular carcinoma using glycomic analysis. Clin Cancer Res (2009) 1.52

Chip-based reversed-phase liquid chromatography-mass spectrometry of permethylated N-linked glycans: a potential methodology for cancer-biomarker discovery. Anal Chem (2010) 1.47

N-linked glycan structures and their expressions change in the blood sera of ovarian cancer patients. J Proteome Res (2012) 1.46

Comparison of methods for profiling O-glycosylation: Human Proteome Organisation Human Disease Glycomics/Proteome Initiative multi-institutional study of IgA1. Mol Cell Proteomics (2009) 1.45

A novel reconstructive technique following central lumpectomy. Plast Reconstr Surg (2006) 1.44

Legionella pneumophila regulates the small GTPase Rab1 activity by reversible phosphorylcholination. Proc Natl Acad Sci U S A (2011) 1.42

Pheromone binding by polymorphic mouse major urinary proteins. Protein Sci (2002) 1.39

Resolving and assigning N-linked glycan structural isomers from ovalbumin by IMS-MS. J Am Soc Mass Spectrom (2008) 1.37

Influences of capsule on cell shape and chain formation of wild-type and pcsB mutants of serotype 2 Streptococcus pneumoniae. J Bacteriol (2009) 1.33

Altered DNA polymerase iota expression in breast cancer cells leads to a reduction in DNA replication fidelity and a higher rate of mutagenesis. Cancer Res (2004) 1.33

Structural characterization of oligosaccharides using MALDI-TOF/TOF tandem mass spectrometry. Anal Chem (2003) 1.27

A bayesian approach to protein inference problem in shotgun proteomics. J Comput Biol (2009) 1.26

Comparative glycomic mapping through quantitative permethylation and stable-isotope labeling. Anal Chem (2007) 1.26

Electrophoretic analysis of N-glycans on microfluidic devices. Anal Chem (2007) 1.26

Quantitative serum glycomics of esophageal adenocarcinoma and other esophageal disease onsets. J Proteome Res (2009) 1.25

Glycomic profiling of invasive and non-invasive breast cancer cells. Glycoconj J (2008) 1.24

ProteinQuant Suite: a bundle of automated software tools for label-free quantitative proteomics. Rapid Commun Mass Spectrom (2008) 1.24

DNA damage-induced phosphorylation of the human telomere-associated protein TRF2. Proc Natl Acad Sci U S A (2005) 1.24

High-sensitivity analytical approaches for the structural characterization of glycoproteins. Chem Rev (2013) 1.23

Solid-phase permethylation for glycomic analysis. Methods Mol Biol (2009) 1.21

Preclinical and clinical studies of gamma secretase inhibitors with docetaxel on human breast tumors. Clin Cancer Res (2013) 1.20

A proteomic survey of rat cerebral cortical synaptosomes. Proteomics (2005) 1.16

Advancement in protein inference from shotgun proteomics using peptide detectability. Pac Symp Biocomput (2007) 1.15

Unnatural amino acid substitution as a probe of the allosteric coupling pathway in a mycobacterial Cu(I) sensor. J Am Chem Soc (2009) 1.14

Selective small molecule Stat3 inhibitor reduces breast cancer tumor-initiating cells and improves recurrence free survival in a human-xenograft model. PLoS One (2012) 1.14

A cancer-associated PCNA expressed in breast cancer has implications as a potential biomarker. Proc Natl Acad Sci U S A (2006) 1.13

Glycomic analysis of sialic acid linkages in glycans derived from blood serum glycoproteins. J Proteome Res (2010) 1.13

Application of dissimilarity indices, principal coordinates analysis, and rank tests to peak tables in metabolomics of the gas chromatography/mass spectrometry of human sweat. Anal Chem (2007) 1.12

Automated interpretation of MS/MS spectra of oligosaccharides. Bioinformatics (2005) 1.12

Combining lectin microcolumns with high-resolution separation techniques for enrichment of glycoproteins and glycopeptides. Anal Chem (2005) 1.11

Identification of N-glycan serum markers associated with hepatocellular carcinoma from mass spectrometry data. J Proteome Res (2010) 1.10

Mapping the proteome of Drosophila melanogaster: analysis of embryos and adult heads by LC-IMS-MS methods. J Proteome Res (2005) 1.10

Efficacy of glycoprotein enrichment by microscale lectin affinity chromatography. J Sep Sci (2008) 1.08

A monolithic PNGase F enzyme microreactor enabling glycan mass mapping of glycoproteins by mass spectrometry. Rapid Commun Mass Spectrom (2005) 1.06

Miniaturized separation techniques in glycomic investigations. J Chromatogr B Analyt Technol Biomed Life Sci (2006) 1.06

Thermodynamic consequences of disrupting a water-mediated hydrogen bond network in a protein:pheromone complex. Protein Sci (2005) 1.06

Songbird chemosignals: volatile compounds in preen gland secretions vary among individuals, sexes, and populations. Behav Ecol (2010) 1.05

Interlaboratory study on differential analysis of protein glycosylation by mass spectrometry: the ABRF glycoprotein research multi-institutional study 2012. Mol Cell Proteomics (2013) 1.03

Multimethodological approach to identification of glycoproteins from the proteome of Francisella tularensis, an intracellular microorganism. J Proteome Res (2010) 1.03

Seasonal variation in volatile compound profiles of preen gland secretions of the dark-eyed junco (Junco hyemalis). J Chem Ecol (2007) 1.02

High-sensitivity profiling of glycoproteins from human blood serum through multiple-lectin affinity chromatography and liquid chromatography/tandem mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci (2006) 1.02

Small-molecule targeting of proliferating cell nuclear antigen chromatin association inhibits tumor cell growth. Mol Pharmacol (2012) 1.02

Thermodynamic analysis of binding between mouse major urinary protein-I and the pheromone 2-sec-butyl-4,5-dihydrothiazole. Biochemistry (2003) 1.01

Chemotaxis assays of mouse sperm on microfluidic devices. Anal Chem (2006) 0.98

Analysis of site-specific glycosylation of renal and hepatic γ-glutamyl transpeptidase from normal human tissue. J Biol Chem (2010) 0.98

Identification of isomeric N-glycan structures by mass spectrometry with 157 nm laser-induced photofragmentation. J Am Soc Mass Spectrom (2008) 0.97

Structural analysis of sulfated glycans by sequential double-permethylation using methyl iodide and deuteromethyl iodide. J Am Soc Mass Spectrom (2009) 0.97

Assigning N-glycosylation sites of glycoproteins using LC/MSMS in conjunction with endo-M/exoglycosidase mixture. J Proteome Res (2010) 0.97

Enzymatic/chemical release of O-glycans allowing MS analysis at high sensitivity. Anal Chem (2009) 0.97

Matrix-assisted laser desorption/ionization mass spectrometry compatible beta-elimination of O-linked oligosaccharides. Rapid Commun Mass Spectrom (2002) 0.97

Increased protein nitration in mitochondrial diseases: evidence for vessel wall involvement. Mol Cell Proteomics (2010) 0.97

Analytical characterization of a facile porous polymer monolithic trypsin microreactor enabling peptide mass mapping using mass spectrometry. Rapid Commun Mass Spectrom (2004) 0.96

DNMT1 is a component of a multiprotein DNA replication complex. Cell Cycle (2003) 0.96

Glycomic analysis by capillary electrophoresis-mass spectrometry. Mass Spectrom Rev (2009) 0.96

Differentiating structural isomers of sialylated glycans by matrix-assisted laser desorption/ionization time-of-flight/time-of-flight tandem mass spectrometry. Rapid Commun Mass Spectrom (2006) 0.96

Semiautomated high-sensitivity profiling of human blood serum glycoproteins through lectin preconcentration and multidimensional chromatography/tandem mass spectrometry. J Proteome Res (2006) 0.96

Modulation of differentiation-related gene 1 expression by cell cycle blocker mimosine, revealed by proteomic analysis. Mol Cell Proteomics (2005) 0.95

Human cell DNA replication is mediated by a discrete multiprotein complex. J Cell Biochem (2002) 0.95

Temperature-dependent spectral density analysis applied to monitoring backbone dynamics of major urinary protein-I complexed with the pheromone 2- sec-butyl-4,5-dihydrothiazole. J Biomol NMR (2004) 0.95

Glycomic and proteomic profiling of pancreatic cyst fluids identifies hyperfucosylated lactosamines on the N-linked glycans of overexpressed glycoproteins. Mol Cell Proteomics (2012) 0.94

HIP2: an online database of human plasma proteins from healthy individuals. BMC Med Genomics (2008) 0.93

Microdeposition device interfacing capillary electrochromatography and microcolumn liquid chromatography with matrix-assisted laser desorption/ionization mass spectrometry. Anal Chem (2004) 0.93

Laser-induced photofragmentation of neutral and acidic glycans inside an ion-trap mass spectrometer. Rapid Commun Mass Spectrom (2007) 0.92

Comprehensive assessment of N-glycans derived from a murine monoclonal antibody: a case for multimethodological approach. Electrophoresis (2005) 0.92

Smoking and lung cancer-induced changes in N-glycosylation of blood serum proteins. Glycobiology (2012) 0.92

Glycoprotein enrichment through lectin affinity techniques. Methods Mol Biol (2008) 0.92

Microchip electrophoresis of N-glycans on serpentine separation channels with asymmetrically tapered turns. Electrophoresis (2011) 0.92

Delineating diseases by IMS-MS profiling of serum N-linked glycans. J Proteome Res (2011) 0.92