Published in BMC Genomics on August 09, 2006
A first generation integrated map of the rainbow trout genome. BMC Genomics (2011) 1.23
A first generation BAC-based physical map of the rainbow trout genome. BMC Genomics (2009) 1.20
Dynamic gene expression in fish muscle during recovery growth induced by a fasting-refeeding schedule. BMC Genomics (2007) 0.97
Unraveling the molecular signatures of oxidative phosphorylation to cope with the nutritionally changing metabolic capabilities of liver and muscle tissues in farmed fish. PLoS One (2015) 0.88
Tissue-specific gene expression and functional regulation of uncoupling protein 2 (UCP2) by hypoxia and nutrient availability in gilthead sea bream (Sparus aurata): implications on the physiological significance of UCP1-3 variants. Fish Physiol Biochem (2013) 0.78
Evidence for the Presence of Glucosensor Mechanisms Not Dependent on Glucokinase in Hypothalamus and Hindbrain of Rainbow Trout (Oncorhynchus mykiss). PLoS One (2015) 0.77
Genomic characterization of the European sea bass Dicentrarchus labrax reveals the presence of a novel uncoupling protein (UCP) gene family member in the teleost fish lineage. BMC Evol Biol (2012) 0.77
Functional characterization of an uncoupling protein in goldfish white skeletal muscle. J Bioenerg Biomembr (2013) 0.75
MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform (2004) 72.40
High throughput fingerprint analysis of large-insert clones. Genome Res (1997) 6.91
Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover. Mol Biol Evol (2002) 6.44
Uncoupling protein-2: a novel gene linked to obesity and hyperinsulinemia. Nat Genet (1997) 5.54
Disruption of the uncoupling protein-2 gene in mice reveals a role in immunity and reactive oxygen species production. Nat Genet (2000) 5.42
FPC: a system for building contigs from restriction fingerprinted clones. Comput Appl Biosci (1997) 5.41
Uncoupling protein-2 negatively regulates insulin secretion and is a major link between obesity, beta cell dysfunction, and type 2 diabetes. Cell (2001) 5.13
Gene duplication in tetraploid fish: model for gene silencing at unlinked duplicated loci. Proc Natl Acad Sci U S A (1978) 4.53
Mathematics of quantitative kinetic PCR and the application of standard curves. Nucleic Acids Res (2003) 3.82
Physiological functions of the mitochondrial uncoupling proteins UCP2 and UCP3. Cell Metab (2005) 3.49
The mitochondrial uncoupling-protein homologues. Nat Rev Mol Cell Biol (2005) 3.42
The uncoupling protein homologues: UCP1, UCP2, UCP3, StUCP and AtUCP. Biochem J (2000) 3.26
Uncoupling protein-3: a new member of the mitochondrial carrier family with tissue-specific expression. FEBS Lett (1997) 3.11
Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon. BMC Mol Biol (2005) 2.60
A role for uncoupling protein-2 as a regulator of mitochondrial hydrogen peroxide generation. FASEB J (1997) 2.56
Only UCP1 can mediate adaptive nonshivering thermogenesis in the cold. FASEB J (2001) 2.34
Superoxide activates mitochondrial uncoupling protein 2 from the matrix side. Studies using targeted antioxidants. J Biol Chem (2002) 2.04
Increased uncoupling protein-2 levels in beta-cells are associated with impaired glucose-stimulated insulin secretion: mechanism of action. Diabetes (2001) 1.74
Diet-induced changes in uncoupling proteins in obesity-prone and obesity-resistant strains of mice. Proc Natl Acad Sci U S A (1998) 1.49
Sequence analysis of a rainbow trout cDNA library and creation of a gene index. Cytogenet Genome Res (2003) 1.46
Association between uncoupling protein polymorphisms (UCP2-UCP3) and energy metabolism/obesity in Pima indians. Hum Mol Genet (1998) 1.40
UCP2 and UCP3 rise in starved rat skeletal muscle but mitochondrial proton conductance is unchanged. FEBS Lett (1999) 1.38
A history of the first uncoupling protein, UCP1. J Bioenerg Biomembr (1999) 1.37
Evolution and diversity of fish genomes. Curr Opin Genet Dev (2003) 1.36
Characterization of a new BAC library for rainbow trout: evidence for multi-locus duplication. Anim Genet (2004) 1.35
Increased uncoupling protein-2 and -3 mRNA expression during fasting in obese and lean humans. J Clin Invest (1997) 1.33
The reactions catalysed by the mitochondrial uncoupling proteins UCP2 and UCP3. Biochim Biophys Acta (2005) 1.27
Uncoupling protein 2 plays an important role in nitric oxide production of lipopolysaccharide-stimulated macrophages. Proc Natl Acad Sci U S A (2002) 1.26
Regulatory motifs for CREB-binding protein and Nfe2l2 transcription factors in the upstream enhancer of the mitochondrial uncoupling protein 1 gene. J Biol Chem (2002) 1.26
A function for novel uncoupling proteins: antioxidant defense of mitochondrial matrix by translocating fatty acid peroxides from the inner to the outer membrane leaflet. FASEB J (2003) 1.22
Uncoupling protein 1 in fish uncovers an ancient evolutionary history of mammalian nonshivering thermogenesis. Physiol Genomics (2005) 1.20
Elevated free fatty acids induce uncoupling protein 3 expression in muscle: a potential explanation for the effect of fasting. Diabetes (1998) 1.17
Regulation of the uncoupling protein-2 gene in INS-1 beta-cells by oleic acid. J Biol Chem (2002) 1.16
Characterization and comparison of microsatellites derived from repeat-enriched libraries and expressed sequence tags. Anim Genet (2005) 1.15
Tissue-dependent upregulation of rat uncoupling protein-2 expression in response to fasting or cold. FEBS Lett (1997) 1.11
The human uncoupling protein-3 gene. Genomic structure, chromosomal localization, and genetic basis for short and long form transcripts. J Biol Chem (1997) 1.09
The mitochondrial uncoupling proteins. Genome Biol (2002) 1.06
Cloning of rat uncoupling protein-3 and uncoupling protein-2 cDNAs: their gene expression in rats fed high-fat diet. FEBS Lett (1997) 1.06
A history of UCP1. Biochem Soc Trans (2001) 1.05
Reliable prediction of transcription factor binding sites by phylogenetic verification. Proc Natl Acad Sci U S A (2005) 1.02
Mitochondrial uncoupling proteins in mammals and plants. Biosci Rep (2001) 0.99
Fatty acid interaction with mitochondrial uncoupling proteins. J Bioenerg Biomembr (1999) 0.92
Functional organization of the human uncoupling protein-2 gene, and juxtaposition to the uncoupling protein-3 gene. Biochem Biophys Res Commun (1999) 0.91
Mitochondrial uncoupling proteins in human physiology and disease. Minerva Med (2002) 0.91
Structure and organization of the human uncoupling protein 2 gene and identification of a common biallelic variant in Caucasian and African-American subjects. Diabetes (1998) 0.90
Uncoupling protein 2, but not uncoupling protein 1, is expressed in the female mouse reproductive tract. J Biol Chem (2003) 0.89
Evolution of mitochondrial uncoupling proteins: novel invertebrate UCP homologues suggest early evolutionary divergence of the UCP family. FEBS Lett (2005) 0.87
The mitochondrial uncoupling protein-2: current status. Int J Biochem Cell Biol (1999) 0.86
Cloning of mouse uncoupling protein 3 cDNA and 5'-flanking region, and its genetic map. Gene (1998) 0.86
Putative role of polymorphisms in UCP1-3 genes for diabetic nephropathy. J Diabetes Complications (2004) 0.86
Physiological effects of variants in human uncoupling proteins: UCP2 influences body-mass index. Biochem Soc Trans (2001) 0.86
The mitochondrial uncoupling protein: structural and genetic studies. Prog Nucleic Acid Res Mol Biol (1997) 0.83
The biology of obesity. Proc Nutr Soc (2005) 0.83
Genomic organization and promoter function of the mouse uncoupling protein 2 (UCP2) gene. FEBS Lett (1998) 0.82
Uncoupling protein 2 and 3 in marsupials: identification, phylogeny, and gene expression in response to cold and fasting in Antechinus flavipes. Physiol Genomics (2004) 0.82
Mutation screening of the human UCP 2 gene in normoglycemic and NIDDM morbidly obese patients: lack of association between new UCP 2 polymorphisms and obesity in French Caucasians. Diabetes (1998) 0.81
Differential expression and cellular localization of activin and inhibin mRNA in the rainbow trout ovary and testis. Gen Comp Endocrinol (2002) 0.79
Skeletal muscle heterogeneity in fasting-induced upregulation of genes encoding UCP2, UCP3, PPARgamma and key enzymes of lipid oxidation. Pflugers Arch (2002) 0.79
Second transmembrane domain of human uncoupling protein 2 is essential for its anion channel formation. FEBS Lett (2004) 0.78
Genomic characterization of a novel pair of ID genes in the rainbow trout (Oncorhynchus mykiss). Anim Genet (2004) 0.78
Characterization of the porcine uncoupling proteins 2 and 3 (UCP2 & UCP3) and their localization to chromosome 9 p by somatic cell hybrids. Anim Genet (1999) 0.76
Bovine UCP2 and UCP3 map to BTA15. Anim Genet (1999) 0.76
Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library. BMC Genomics (2009) 1.81
Status and opportunities for genomics research with rainbow trout. Comp Biochem Physiol B Biochem Mol Biol (2002) 1.80
A conserved haplotype controls parallel adaptation in geographically distant salmonid populations. Mol Ecol (2011) 1.78
A second generation genetic map for rainbow trout (Oncorhynchus mykiss). BMC Genet (2008) 1.68
A salmonid EST genomic study: genes, duplications, phylogeny and microarrays. BMC Genomics (2008) 1.68
Assignment of rainbow trout linkage groups to specific chromosomes. Genetics (2006) 1.63
Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. BMC Genomics (2010) 1.61
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project. Genome Biol (2015) 1.40
RNA-Seq identifies SNP markers for growth traits in rainbow trout. PLoS One (2012) 1.25
A first generation integrated map of the rainbow trout genome. BMC Genomics (2011) 1.23
Gene expression in the brain and kidney of rainbow trout in response to handling stress. BMC Genomics (2005) 1.23
Microarray gene expression analysis in atrophying rainbow trout muscle: a unique nonmammalian muscle degradation model. Physiol Genomics (2006) 1.23
A first generation BAC-based physical map of the rainbow trout genome. BMC Genomics (2009) 1.20
Comparative mapping of expressed sequence tags containing microsatellites in rainbow trout (Oncorhynchus mykiss). BMC Genomics (2005) 1.19
Role of importin alpha8, a new member of the importin alpha family of nuclear transport proteins, in early embryonic development in cattle. Biol Reprod (2009) 1.14
Cloning and analysis of fetal ovary microRNAs in cattle. Anim Reprod Sci (2010) 1.13
Physical and genetic mapping of the rainbow trout major histocompatibility regions: evidence for duplication of the class I region. Immunogenetics (2003) 1.12
Effect of starvation on global gene expression and proteolysis in rainbow trout (Oncorhynchus mykiss). BMC Genomics (2007) 1.11
Cloning and characterization of microRNAs from rainbow trout (Oncorhynchus mykiss): their expression during early embryonic development. BMC Dev Biol (2008) 1.10
A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of conserved synteny with model fish genomes. Mar Biotechnol (NY) (2011) 1.06
SNP discovery and development of genetic markers for mapping innate immune response genes in common carp (Cyprinus carpio). Fish Shellfish Immunol (2010) 1.01
Characterization of rainbow trout myostatin-2 genes (rtMSTN-2a and -2b): genomic organization, differential expression, and pseudogenization. Endocrinology (2007) 1.00
Validation and application of a high fidelity mRNA linear amplification procedure for profiling gene expression. Vet Immunol Immunopathol (2005) 0.99
A microRNA repertoire for functional genome research in rainbow trout (Oncorhynchus mykiss). Mar Biotechnol (NY) (2009) 0.98
Phylogeny and strain typing of Escherichia coli, inferred from variation at mononucleotide repeat loci. Appl Environ Microbiol (2004) 0.98
Analysis of BAC-end sequences in rainbow trout: content characterization and assessment of synteny between trout and other fish genomes. BMC Genomics (2011) 0.97
MicroRNA-196a regulates bovine newborn ovary homeobox gene (NOBOX) expression during early embryogenesis. BMC Dev Biol (2011) 0.96
Identification of novel bovine cumulus cell molecular markers predictive of oocyte competence: functional and diagnostic implications. Biol Reprod (2008) 0.95
Identification, characterization, and quantitative expression analysis of rainbow trout myostatin-1a and myostatin-1b genes. J Endocrinol (2006) 0.94
JY-1, an oocyte-specific gene, regulates granulosa cell function and early embryonic development in cattle. Proc Natl Acad Sci U S A (2007) 0.94
Assessment of genetic correlation between bacterial cold water disease resistance and spleen index in a domesticated population of rainbow trout: identification of QTL on chromosome Omy19. PLoS One (2013) 0.93
A novel functional role for the oocyte-specific transcription factor newborn ovary homeobox (NOBOX) during early embryonic development in cattle. Endocrinology (2010) 0.93
Identification and molecular characterization of the rainbow trout calpains (Capn1 and Capn2): their expression in muscle wasting during starvation. Comp Biochem Physiol B Biochem Mol Biol (2005) 0.92
Relating instrumental texture, determined by variable-blade and Allo-Kramer shear attachments, to sensory analysis of rainbow trout, Oncorhynchus mykiss, fillets. J Food Sci (2010) 0.92
Skin transcriptome profiles associated with coat color in sheep. BMC Genomics (2013) 0.91
Proteomic signature of muscle atrophy in rainbow trout. J Proteomics (2009) 0.91
Molecular characterization of muscle atrophy and proteolysis associated with spawning in rainbow trout. Comp Biochem Physiol Part D Genomics Proteomics (2006) 0.91
Characterization of the rainbow trout egg microRNA transcriptome. PLoS One (2012) 0.90
Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors. BMC Genomics (2011) 0.90
Identification, characterization and genetic mapping of TLR7, TLR8a1 and TLR8a2 genes in rainbow trout (Oncorhynchus mykiss). Dev Comp Immunol (2009) 0.90
Effects of short-term growth hormone treatment on liver and muscle transcriptomes in rainbow trout (Oncorhynchus mykiss). Physiol Genomics (2007) 0.89
Detection of QTL in rainbow trout affecting survival when challenged with Flavobacterium psychrophilum. Mar Biotechnol (NY) (2013) 0.88
Suggestive association of major histocompatibility IB genetic markers with resistance to bacterial cold water disease in rainbow trout (Oncorhynchus mykiss). Mar Biotechnol (NY) (2008) 0.88
Identification and characterization of microRNAs in white and brown alpaca skin. BMC Genomics (2012) 0.87
A microsatellite linkage map of striped bass (Morone saxatilis) reveals conserved synteny with the three-spined stickleback (Gasterosteus aculeatus). Mar Biotechnol (NY) (2011) 0.87
Identification and regulatory analysis of rainbow trout tapasin and tapasin-related genes. Immunogenetics (2006) 0.87
Differential gene expression in the bovine corpus luteum during transition from early phase to midphase and its potential role in acquisition of luteolytic sensitivity to prostaglandin F2 alpha. Biol Reprod (2009) 0.86
Molecular characterization and expression profiles of cyclin B1, B2 and Cdc2 kinase during oogenesis and spermatogenesis in rainbow trout (Oncorhynchus mykiss). Anim Reprod Sci (2007) 0.86
Identification of single-nucleotide polymorphism markers associated with cortisol response to crowding in rainbow trout. Mar Biotechnol (NY) (2015) 0.86
Molecular cloning and expression of bovine nucleoplasmin 2 (NPM2): a maternal effect gene regulated by miR-181a. Reprod Biol Endocrinol (2011) 0.85
A resource of single-nucleotide polymorphisms for rainbow trout generated by restriction-site associated DNA sequencing of doubled haploids. Mol Ecol Resour (2013) 0.84
Development and testing of a high-density cDNA microarray resource for cattle. Physiol Genomics (2003) 0.83
Identification of OORP-T, a novel oocyte-specific gene encoding a protein with a conserved oxysterol binding protein domain in rainbow trout. Mol Reprod Dev (2007) 0.83
Identification of RtGST-1, a novel germ cell-specific mRNA-like transcript predominantly expressed in early previtellogenic oocytes in rainbow trout (Oncorhynchus mykiss). Mol Reprod Dev (2008) 0.82
Molecular characterization of the MuRF genes in rainbow trout: Potential role in muscle degradation. Comp Biochem Physiol B Biochem Mol Biol (2010) 0.81
Molecular cloning, characterization and expression analysis of TLR9, MyD88 and TRAF6 genes in common carp (Cyprinus carpio). Fish Shellfish Immunol (2010) 0.81
Evidence that cocaine- and amphetamine-regulated transcript is a novel intraovarian regulator of follicular atresia. Endocrinology (2004) 0.80
Amplified intergenic locus polymorphism as a basis for bacterial typing of Listeria spp. and Escherichia coli. Appl Environ Microbiol (2005) 0.79
Microarray analysis of gene expression in granulosal cells from persistent follicles in cattle. Anim Reprod Sci (2007) 0.79
Characterization of calpastatin gene in fish: its potential role in muscle growth and fillet quality. Comp Biochem Physiol B Biochem Mol Biol (2005) 0.79
Changes of maternal transcripts in oocytes from persistent follicles in cattle. Mol Reprod Dev (2007) 0.78
Quantitative trait loci affecting response to crowding stress in an F(2) generation of rainbow trout produced through phenotypic selection. Mar Biotechnol (NY) (2013) 0.78
Effect of sexual maturation on muscle gene expression of rainbow trout: RNA-Seq approach. Physiol Rep (2013) 0.78
Identification, characterization and genetic mapping of TLR1 loci in rainbow trout (Oncorhynchus mykiss). Fish Shellfish Immunol (2010) 0.78
Fasting and refeeding affect the expression of the Inhibitor of DNA Binding (ID) genes in rainbow trout (Oncorhynchus mykiss) muscle. Comp Biochem Physiol B Biochem Mol Biol (2006) 0.77
QTL affecting stress response to crowding in a rainbow trout broodstock population. BMC Genet (2012) 0.77
IGF-I, IGF-II, and IGF-receptor-1 transcript and IGF-II protein expression in myostatin knockout mice tissues. Muscle Nerve (2002) 0.77
Cloning and characterization of a novel oocyte-specific gene encoding an F-Box protein in rainbow trout (Oncorhynchus mykiss). Reprod Biol Endocrinol (2013) 0.77
Identification and expression of Smads associated with TGF-β/activin/nodal signaling pathways in the rainbow trout (Oncorhynchus mykiss). Fish Physiol Biochem (2012) 0.77
Anabolic effects of feeding beta2-adrenergic agonists on rainbow trout muscle proteases and proteins. Comp Biochem Physiol A Mol Integr Physiol (2006) 0.77