Published in Am J Physiol Cell Physiol on August 23, 2006
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Mitochondrial NADH fluorescence is enhanced by complex I binding. Biochemistry (2008) 1.30
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Mitochondria as a target of environmental toxicants. Toxicol Sci (2013) 1.24
Impaired mitochondrial respiration and protein nitration in the rat hippocampus after acute inhalation of combustion smoke. Toxicol Appl Pharmacol (2008) 1.18
A quantitative map of the liver mitochondrial phosphoproteome reveals posttranslational control of ketogenesis. Cell Metab (2012) 1.16
Proteomic analysis of the mitochondria from embryonic and postnatal rat brains reveals response to developmental changes in energy demands. J Proteomics (2014) 1.16
Use of (32)P to study dynamics of the mitochondrial phosphoproteome. J Proteome Res (2009) 1.12
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Proteome profile of functional mitochondria from human skeletal muscle using one-dimensional gel electrophoresis and HPLC-ESI-MS/MS. J Proteomics (2009) 1.09
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Proteomic changes associated with diabetes in the BB-DP rat. Am J Physiol Endocrinol Metab (2008) 1.05
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Mice over-expressing the myocardial creatine transporter develop progressive heart failure and show decreased glycolytic capacity. J Mol Cell Cardiol (2009) 1.02
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Targeting the mitochondria to augment myocardial protection. Curr Opin Pharmacol (2008) 0.97
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Caenorhabditis elegans as a model system to study intercompartmental proteostasis: Interrelation of mitochondrial function, longevity, and neurodegenerative diseases. Dev Dyn (2010) 0.90
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Regulation of autophagy and mitophagy by nutrient availability and acetylation. Biochim Biophys Acta (2014) 0.88
Thiamine triphosphate synthesis in rat brain occurs in mitochondria and is coupled to the respiratory chain. J Biol Chem (2009) 0.87
Deficiency of cardiolipin synthase causes abnormal mitochondrial function and morphology in germ cells of Caenorhabditis elegans. J Biol Chem (2011) 0.86
Methods for the analysis of histone H3 and H4 acetylation in blood. Epigenetics (2012) 0.86
Caloric Restriction and the Nutrient-Sensing PGC-1α in Mitochondrial Homeostasis: New Perspectives in Neurodegeneration. Int J Cell Biol (2012) 0.85
Expansion of the human mitochondrial proteome by intra- and inter-compartmental protein duplication. Genome Biol (2009) 0.83
Cytoplasmic hybrid (cybrid) cell lines as a practical model for mitochondriopathies. Redox Biol (2014) 0.82
Effects of age and calorie restriction on tryptophan nitration, protein content, and activity of succinyl-CoA:3-ketoacid CoA transferase in rat kidney mitochondria. Free Radic Biol Med (2009) 0.81
Aging synaptic mitochondria exhibit dynamic proteomic changes while maintaining bioenergetic function. Aging (Albany NY) (2014) 0.81
Parallel proteomics to improve coverage and confidence in the partially annotated Oryctolagus cuniculus mitochondrial proteome. Mol Cell Proteomics (2010) 0.81
Perspectives on: SGP symposium on mitochondrial physiology and medicine: mitochondrial proteome design: from molecular identity to pathophysiological regulation. J Gen Physiol (2012) 0.78
Mitochondrial-associated metabolic disorders: foundations, pathologies and recent progress. Nutr Metab (Lond) (2013) 0.77
MitProNet: A knowledgebase and analysis platform of proteome, interactome and diseases for mammalian mitochondria. PLoS One (2014) 0.77
Translational implications of the β-cell epigenome in diabetes mellitus. Transl Res (2014) 0.77
Ageing: beneficial miscommunication. Nature (2013) 0.76
Non-microtubular localizations of microtubule-associated protein 6 (MAP6). PLoS One (2014) 0.76
Prenatal Exposure to a Maternal High-Fat Diet Affects Histone Modification of Cardiometabolic Genes in Newborn Rats. Nutrients (2017) 0.75
Mitochondrial Changes in β0-Thalassemia/Hb E Disease. PLoS One (2016) 0.75
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Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma. Nat Biotechnol (2009) 9.67
The mammalian target of rapamycin (mTOR) pathway regulates mitochondrial oxygen consumption and oxidative capacity. J Biol Chem (2006) 4.28
Differential regulation of central nervous system autoimmunity by T(H)1 and T(H)17 cells. Nat Med (2008) 4.24
Deficiency or inhibition of oxygen sensor Phd1 induces hypoxia tolerance by reprogramming basal metabolism. Nat Genet (2008) 3.94
The physiological role of mitochondrial calcium revealed by mice lacking the mitochondrial calcium uniporter. Nat Cell Biol (2013) 3.39
Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry. J Proteome Res (2010) 3.08
Redundancy in the population code of the retina. Neuron (2005) 3.02
Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing. Proc Natl Acad Sci U S A (2003) 2.64
Highly efficient endosomal labeling of progenitor and stem cells with large magnetic particles allows magnetic resonance imaging of single cells. Blood (2003) 2.50
Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance. Mol Cell Proteomics (2009) 2.39
Absolute myocardial perfusion in canines measured by using dual-bolus first-pass MR imaging. Radiology (2004) 2.29
Role of mitochondrial Ca2+ in the regulation of cellular energetics. Biochemistry (2012) 2.26
An integrated clinico-metabolomic model improves prediction of death in sepsis. Sci Transl Med (2013) 2.23
Detecting acute coronary syndrome in the emergency department with cardiac magnetic resonance imaging. Circulation (2003) 2.14
Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses. Mol Cell Proteomics (2009) 2.09
Pyruvate dehydrogenase complex activity controls metabolic and malignant phenotype in cancer cells. J Biol Chem (2008) 2.07
Mitochondrial matrix phosphoproteome: effect of extra mitochondrial calcium. Biochemistry (2006) 2.06
Carotid artery atherosclerosis: in vivo morphologic characterization with gadolinium-enhanced double-oblique MR imaging initial results. Radiology (2002) 2.01
Metabolic network control of oxidative phosphorylation: multiple roles of inorganic phosphate. J Biol Chem (2003) 1.95
Serum proteomics and biomarker discovery across the spectrum of nonalcoholic fatty liver disease. Hepatology (2010) 1.91
Regulation of pyruvate dehydrogenase kinase expression by peroxisome proliferator-activated receptor-alpha ligands, glucocorticoids, and insulin. Diabetes (2002) 1.84
Selectivity for multiple stimulus features in retinal ganglion cells. J Neurophysiol (2006) 1.81
Human peptidoglycan recognition protein-L is an N-acetylmuramoyl-L-alanine amidase. J Biol Chem (2003) 1.74
Mutations in BCKD-kinase lead to a potentially treatable form of autism with epilepsy. Science (2012) 1.65
Skeletal muscle NAD(P)H two-photon fluorescence microscopy in vivo: topology and optical inner filters. Biophys J (2004) 1.62
Multi-photon excitation microscopy in intact animals. J Microsc (2006) 1.60
Protein kinase B-alpha inhibits human pyruvate dehydrogenase kinase-4 gene induction by dexamethasone through inactivation of FOXO transcription factors. Diabetes (2004) 1.58
The mammalian longevity-associated gene product p66shc regulates mitochondrial metabolism. J Biol Chem (2006) 1.46
Pyruvate dehydrogenase kinase-4 deficiency lowers blood glucose and improves glucose tolerance in diet-induced obese mice. Am J Physiol Endocrinol Metab (2008) 1.42
Nuclear magnetic shielding and chirality IV. The odd and even character of the shielding response to a chiral potential. J Chem Phys (2004) 1.42
Clinical evidence for the safety of GAD65 immunomodulation in adult-onset autoimmune diabetes. J Diabetes Complications (2005) 1.42
p53 improves aerobic exercise capacity and augments skeletal muscle mitochondrial DNA content. Circ Res (2009) 1.39
Atomic and molecular parity nonconservation and sum frequency generation solutions to the ozma problem. J Phys Chem B (2006) 1.39
Exercise promotes BCAA catabolism: effects of BCAA supplementation on skeletal muscle during exercise. J Nutr (2004) 1.35
cDNA microarray analysis of genes associated with ERBB2 (HER2/neu) overexpression in human mammary luminal epithelial cells. Oncogene (2003) 1.34
Label-free mass spectrometry-based protein quantification technologies in proteomic analysis. Brief Funct Genomic Proteomic (2008) 1.32
A multiple reaction monitoring method for absolute quantification of the human liver alcohol dehydrogenase ADH1C1 isoenzyme. Anal Biochem (2007) 1.32
Mitochondrial NADH fluorescence is enhanced by complex I binding. Biochemistry (2008) 1.30
Short communication: Subcellular motion compensation for minimally invasive microscopy, in vivo: evidence for oxygen gradients in resting muscle. Circ Res (2010) 1.30
Distribution of mitochondrial NADH fluorescence lifetimes: steady-state kinetics of matrix NADH interactions. Biochemistry (2005) 1.29
Role of pyruvate dehydrogenase kinase isoenzyme 4 (PDHK4) in glucose homoeostasis during starvation. Biochem J (2006) 1.29
Quantitative mitochondrial phosphoproteomics using iTRAQ on an LTQ-Orbitrap with high energy collision dissociation. J Proteome Res (2009) 1.28
Stoichiometry of STAT3 and mitochondrial proteins: Implications for the regulation of oxidative phosphorylation by protein-protein interactions. J Biol Chem (2010) 1.28
Impaired growth and neurological abnormalities in branched-chain alpha-keto acid dehydrogenase kinase-deficient mice. Biochem J (2006) 1.27
Heightened expression of CTCF in breast cancer cells is associated with resistance to apoptosis. Cancer Res (2005) 1.26
Increased oxidative metabolism in the Li-Fraumeni syndrome. N Engl J Med (2013) 1.25
Adoptive transfer of immunomodulatory M2 macrophages prevents type 1 diabetes in NOD mice. Diabetes (2012) 1.25
In vivo study of microcirculation in canine myocardium using the IVIM method. Magn Reson Med (2003) 1.23
Effects of HIV protease inhibitor ritonavir on Akt-regulated cell proliferation in breast cancer. Clin Cancer Res (2006) 1.23
In vivo evaluation of pretargeted 64Cu for tumor imaging and therapy. J Nucl Med (2003) 1.22
CD4 T cell activation by myelin oligodendrocyte glycoprotein is suppressed by adult but not cord blood CD25+ T cells. Eur J Immunol (2003) 1.22
Biochemical analysis of the damage recognition process in nucleotide excision repair. J Biol Chem (2002) 1.20
Diabetes increases formation of advanced glycation end products on Sarco(endo)plasmic reticulum Ca2+-ATPase. Diabetes (2004) 1.18
Loss or silencing of the PHD1 prolyl hydroxylase protects livers of mice against ischemia/reperfusion injury. Gastroenterology (2009) 1.18
Stimulation of glucose oxidation protects against acute myocardial infarction and reperfusion injury. Cardiovasc Res (2012) 1.18
Functional consequences of mitochondrial proteome heterogeneity. Am J Physiol Cell Physiol (2006) 1.17
Altitude ammonia-oxidizing bacteria and archaea in soils of Mount Everest. FEMS Microbiol Ecol (2009) 1.17
Biodisposition and metabolism of [(18)F]fluorocholine in 9L glioma cells and 9L glioma-bearing fisher rats. Eur J Nucl Med Mol Imaging (2008) 1.16
Proteomic analysis of blastema formation in regenerating axolotl limbs. BMC Biol (2009) 1.16
Starvation and diabetes reduce the amount of pyruvate dehydrogenase phosphatase in rat heart and kidney. Diabetes (2003) 1.15
At what scale should microarray data be analyzed? Am J Pharmacogenomics (2004) 1.14
A functional genomic screen for cardiogenic genes using RNA interference in developing Drosophila embryos. Proc Natl Acad Sci U S A (2003) 1.13
Living without creatine: unchanged exercise capacity and response to chronic myocardial infarction in creatine-deficient mice. Circ Res (2013) 1.13
Contribution of macromolecular structure to the retention of low-density lipoprotein at arterial branch points. Circulation (2008) 1.12
Measurement of skeletal muscle perfusion during postischemic reactive hyperemia using contrast-enhanced MRI with a step-input function. Magn Reson Med (2005) 1.12
Use of (32)P to study dynamics of the mitochondrial phosphoproteome. J Proteome Res (2009) 1.12
The impact of blood contamination on the proteome of cerebrospinal fluid. Proteomics (2005) 1.12
The visceral pericardium: macromolecular structure and contribution to passive mechanical properties of the left ventricle. Am J Physiol Heart Circ Physiol (2007) 1.12
Pivotal advance: HMGB1 expression in active lesions of human and experimental multiple sclerosis. J Leukoc Biol (2008) 1.12
Succinyl-CoA synthetase is a phosphate target for the activation of mitochondrial metabolism. Biochemistry (2009) 1.12
Mechanisms responsible for regulation of pyruvate dehydrogenase kinase 4 gene expression. Adv Enzyme Regul (2004) 1.12
Genetic amplification of the transcriptional response to hypoxia as a novel means of identifying regulators of angiogenesis. Genomics (2004) 1.12
Branched-chain amino acid catabolism in exercise and liver disease. J Nutr (2006) 1.11
Identification and characterization of a novel human PP1 phosphatase complex. J Biol Chem (2010) 1.09
Carbohydrate-response element-binding protein deletion alters substrate utilization producing an energy-deficient liver. J Biol Chem (2007) 1.09
Pyruvate dehydrogenase kinase isoenzyme 4 (PDHK4) deficiency attenuates the long-term negative effects of a high-saturated fat diet. Biochem J (2009) 1.09
Identification of serum N-acetylmuramoyl-l-alanine amidase as liver peptidoglycan recognition protein 2. Biochim Biophys Acta (2005) 1.09
Regulation of oxidative phosphorylation complex activity: effects of tissue-specific metabolic stress within an allometric series and acute changes in workload. Am J Physiol Regul Integr Comp Physiol (2012) 1.09
Sulforaphane attenuates hepatic fibrosis via NF-E2-related factor 2-mediated inhibition of transforming growth factor-β/Smad signaling. Free Radic Biol Med (2011) 1.08
Toll-like receptor activation reveals developmental reorganization and unmasks responder subsets of microglia. Glia (2012) 1.08
Optimization of multiphoton excitation microscopy by total emission detection using a parabolic light reflector. J Microsc (2007) 1.08
Mutations in the gene encoding 3-hydroxyisobutyryl-CoA hydrolase results in progressive infantile neurodegeneration. Am J Hum Genet (2006) 1.08
Chronic diabetes increases advanced glycation end products on cardiac ryanodine receptors/calcium-release channels. Diabetes (2003) 1.08
Identifying patients at high risk of a cardiovascular event in the near future: current status and future directions: report of a national heart, lung, and blood institute working group. Circulation (2010) 1.07
Retinoic acids and trichostatin A (TSA), a histone deacetylase inhibitor, induce human pyruvate dehydrogenase kinase 4 (PDK4) gene expression. Biochim Biophys Acta (2006) 1.07
Synergy from silence in a combinatorial neural code. J Neurosci (2011) 1.06