Published in Methods Mol Biol on January 01, 2006
Characterization and identification of microRNA core promoters in four model species. PLoS Comput Biol (2007) 2.86
Structural basis of microRNA length variety. Nucleic Acids Res (2010) 1.56
Upregulation of micro RNA-146a (miRNA-146a), a marker for inflammatory neurodegeneration, in sporadic Creutzfeldt-Jakob disease (sCJD) and Gerstmann-Straussler-Scheinker (GSS) syndrome. J Toxicol Environ Health A (2011) 1.28
Increased microRNA-630 expression in gastric cancer is associated with poor overall survival. PLoS One (2014) 1.09
Rapid determination of RNA accessible sites by surface plasmon resonance detection of hybridization to DNA arrays. Anal Chem (2009) 0.87
MicroRNA (miRNA): sequence and stability, viroid-like properties, and disease association in the CNS. Brain Res (2014) 0.83
Post-transcriptional regulation of DNA damage-responsive gene expression. Antioxid Redox Signal (2013) 0.83
First generation stochastic gene episilencing (step1) model and applications to in vitro carcinogen exposure. Dose Response (2011) 0.76
Evolution of microRNA (miRNA) Structure and Function in Plants and Animals: Relevance to Aging and Disease. J Aging Sci (2014) 0.76
Isolation and Identification of Post-Transcriptional Gene Silencing-Related Micro-RNAs by Functionalized Silicon Nanowire Field-effect Transistor. Sci Rep (2015) 0.75
RNA structure of trinucleotide repeats associated with human neurological diseases. Nucleic Acids Res (2003) 2.34
Cellular toxicity of expanded RNA repeats: focus on RNA foci. Hum Mol Genet (2011) 2.05
Structural features of microRNA (miRNA) precursors and their relevance to miRNA biogenesis and small interfering RNA/short hairpin RNA design. J Biol Chem (2004) 2.01
Ribonuclease dicer cleaves triplet repeat hairpins into shorter repeats that silence specific targets. Mol Cell (2007) 1.87
Mutant CAG repeats of Huntingtin transcript fold into hairpins, form nuclear foci and are targets for RNA interference. Nucleic Acids Res (2011) 1.77
Structural basis of microRNA length variety. Nucleic Acids Res (2010) 1.56
CAG repeats mimic CUG repeats in the misregulation of alternative splicing. Nucleic Acids Res (2011) 1.42
Molecular architecture of CAG repeats in human disease related transcripts. J Mol Biol (2004) 1.37
Trinucleotide repeats in human genome and exome. Nucleic Acids Res (2010) 1.35
Structural diversity of triplet repeat RNAs. J Biol Chem (2010) 1.29
CAG repeats containing CAA interruptions form branched hairpin structures in spinocerebellar ataxia type 2 transcripts. J Biol Chem (2004) 1.29
Structural insights into CUG repeats containing the 'stretched U-U wobble': implications for myotonic dystrophy. Nucleic Acids Res (2009) 1.28
Inhibition of mutant huntingtin expression by RNA duplex targeting expanded CAG repeats. Nucleic Acids Res (2011) 1.27
Repetitive sequences that shape the human transcriptome. FEBS Lett (2004) 1.19
Atomic resolution structure of CAG RNA repeats: structural insights and implications for the trinucleotide repeat expansion diseases. Nucleic Acids Res (2010) 1.18
The role of Dicer protein partners in the processing of microRNA precursors. PLoS One (2011) 1.15
Structures of trinucleotide repeats in human transcripts and their functional implications. Nucleic Acids Res (2003) 1.14
Facile FMR1 mRNA structure regulation by interruptions in CGG repeats. Nucleic Acids Res (2005) 1.14
Sequence-non-specific effects of RNA interference triggers and microRNA regulators. Nucleic Acids Res (2009) 1.11
The role of the precursor structure in the biogenesis of microRNA. Cell Mol Life Sci (2011) 1.11
Patterns of CAG repeat interruptions in SCA1 and SCA2 genes in relation to repeat instability. Hum Mutat (2004) 1.10
Crystal structures of CGG RNA repeats with implications for fragile X-associated tremor ataxia syndrome. Nucleic Acids Res (2011) 1.06
Structural determinants of BRCA1 translational regulation. J Biol Chem (2002) 1.05
Imperfect CAG repeats form diverse structures in SCA1 transcripts. J Biol Chem (2004) 1.03
Genotyping of simple sequence repeats--factors implicated in shadow band generation revisited. Electrophoresis (2006) 0.98
Copy number variation of microRNA genes in the human genome. BMC Genomics (2011) 0.97
CAG repeat RNA as an auxiliary toxic agent in polyglutamine disorders. RNA Biol (2011) 0.97
Triplet repeats in transcripts: structural insights into RNA toxicity. Biol Chem (2012) 0.96
RNAimmuno: a database of the nonspecific immunological effects of RNA interference and microRNA reagents. RNA (2012) 0.94
RNA toxicity in polyglutamine disorders: concepts, models, and progress of research. J Mol Med (Berl) (2013) 0.94
Hairpin structure within the 3'UTR of DNA polymerase beta mRNA acts as a post-transcriptional regulatory element and interacts with Hax-1. Nucleic Acids Res (2007) 0.93
An evaluation of oligonucleotide-based therapeutic strategies for polyQ diseases. BMC Mol Biol (2012) 0.91
High-resolution northern blot for a reliable analysis of microRNAs and their precursors. ScientificWorldJournal (2011) 0.91
Structural aspects of microRNA biogenesis. IUBMB Life (2004) 0.90
CAG and CTG repeat polymorphism in exons of human genes shows distinct features at the expandable loci. Hum Mutat (2007) 0.90
Crystallographic characterization of CCG repeats. Nucleic Acids Res (2012) 0.90
Recent advances in understanding of the immunological off-target effects of siRNA. Curr Gene Ther (2011) 0.90
The panorama of miRNA-mediated mechanisms in mammalian cells. Cell Mol Life Sci (2014) 0.90
Trinucleotide repeat system for sequence specificity analysis of RNA structure probing reagents. Anal Biochem (2010) 0.89
Regulation of huntingtin gene expression by miRNA-137, -214, -148a, and their respective isomiRs. Int J Mol Sci (2013) 0.88
Mouse models of polyglutamine diseases in therapeutic approaches: review and data table. Part II. Mol Neurobiol (2012) 0.86
Northern blotting analysis of microRNAs, their precursors and RNA interference triggers. BMC Mol Biol (2011) 0.85
Mouse ataxin-3 functional knock-out model. Neuromolecular Med (2010) 0.84
Mouse models of polyglutamine diseases: review and data table. Part I. Mol Neurobiol (2012) 0.84
Self-duplexing CUG repeats selectively inhibit mutant huntingtin expression. Nucleic Acids Res (2013) 0.82
RNA imaging in living cells - methods and applications. RNA Biol (2014) 0.82
Analysis of microRNA length variety generated by recombinant human Dicer. Methods Mol Biol (2013) 0.79
Trinucleotide repeats: triggers for genomic disorders? Genome Med (2010) 0.78
Diced triplets expose neurons to RISC. PLoS Genet (2012) 0.78
Optimum sample medium for single-nucleotide polymorphism and mutation detection by capillary electrophoresis. Electrophoresis (2004) 0.78
Characterization of a naturally occurring truncated Dicer. Mol Biol Rep (2015) 0.76
RNA structure analysis assisted by capillary electrophoresis. Nucleic Acids Res (2002) 0.76
Pseudouridylation of U(35) in the anticodon of Arabidopsis thaliana pre-tRNA(Tyr) depends on length rather than structure of an intron. Biochim Biophys Acta (2002) 0.76
Expression characteristics of triplet repeat-containing RNAs and triplet repeat-interacting proteins in human tissues. Acta Biochim Pol (2008) 0.75
Pathogenesis of spinocerebellar ataxias viewed from the RNA perspective. Cerebellum (2005) 0.75
Structural factors determining DNA length limitations in conformation-sensitive mutation detection methods. Electrophoresis (2005) 0.75
Economical protocol for combined single-strand conformation polymorphism and heteroduplex analysis on a standard capillary electrophoresis apparatus. Methods Mol Biol (2010) 0.75
Accurate and sensitive analysis of triplet repeat expansions by capillary electrophoresis. Electrophoresis (2005) 0.75
Rapid heteroduplex analysis by capillary electrophoresis. Clin Chim Acta (2005) 0.75