Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation.

PubWeight™: 1.41‹?› | Rank: Top 5%

🔗 View Article (PMC 1802569)

Published in Nucleic Acids Res on December 07, 2006

Authors

Sun-Young Kim1, Sang-Gyu Kim, Youn-Sung Kim, Pil Joon Seo, Mikyoung Bae, Hye-Kyung Yoon, Chung-Mo Park

Author Affiliations

1: Molecular Signaling Laboratory, Department of Chemistry, Seoul National University, Seoul 151-742, Korea.

Articles citing this

Salt stress responses in Arabidopsis utilize a signal transduction pathway related to endoplasmic reticulum stress signaling. Plant J (2007) 2.06

An endoplasmic reticulum stress response in Arabidopsis is mediated by proteolytic processing and nuclear relocation of a membrane-associated transcription factor, bZIP28. Plant Cell (2007) 2.05

Roles of NAC transcription factors in the regulation of biotic and abiotic stress responses in plants. Front Microbiol (2013) 1.69

Genome-wide survey and expression analysis of the plant-specific NAC transcription factor family in soybean during development and dehydration stress. DNA Res (2011) 1.55

The membrane-bound NAC transcription factor ANAC013 functions in mitochondrial retrograde regulation of the oxidative stress response in Arabidopsis. Plant Cell (2013) 1.34

A membrane-associated NAC transcription factor regulates salt-responsive flowering via FLOWERING LOCUS T in Arabidopsis. Planta (2007) 1.23

An RxLR effector from Phytophthora infestans prevents re-localisation of two plant NAC transcription factors from the endoplasmic reticulum to the nucleus. PLoS Pathog (2013) 1.15

Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera. Plant Cell Rep (2012) 1.08

Fructose sensitivity is suppressed in Arabidopsis by the transcription factor ANAC089 lacking the membrane-bound domain. Proc Natl Acad Sci U S A (2011) 1.07

Integration of auxin and salt signals by the NAC transcription factor NTM2 during seed germination in Arabidopsis. Plant Physiol (2011) 1.04

Molecular characterization of banana NAC transcription factors and their interactions with ethylene signalling component EIL during fruit ripening. J Exp Bot (2012) 1.03

Genome-wide organization and expression profiling of the NAC transcription factor family in potato (Solanum tuberosum L.). DNA Res (2013) 0.98

The membrane-associated transcription factor NAC089 controls ER-stress-induced programmed cell death in plants. PLoS Genet (2014) 0.95

Characterization of barley (Hordeum vulgare L.) NAC transcription factors suggests conserved functions compared to both monocots and dicots. BMC Res Notes (2011) 0.92

Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid. Proc Natl Acad Sci U S A (2015) 0.91

Plant Responses to Simultaneous Biotic and Abiotic Stress: Molecular Mechanisms. Plants (Basel) (2014) 0.89

Identification of recognition sequence of ANAC078 protein by the cyclic amplification and selection of targets technique. Plant Signal Behav (2010) 0.88

Genome-wide identification and expression analysis of the CaNAC family members in chickpea during development, dehydration and ABA treatments. PLoS One (2014) 0.87

Soybean SAT1 (Symbiotic Ammonium Transporter 1) encodes a bHLH transcription factor involved in nodule growth and NH4+ transport. Proc Natl Acad Sci U S A (2014) 0.87

Transcriptomics and functional genomics of ROS-induced cell death regulation by RADICAL-INDUCED CELL DEATH1. PLoS Genet (2014) 0.86

Genome-Wide Identification and Expression Analysis of the NAC Transcription Factor Family in Cassava. PLoS One (2015) 0.82

Behind the lines-actions of bacterial type III effector proteins in plant cells. FEMS Microbiol Rev (2016) 0.80

The membrane-tethered transcription factor ANAC089 serves as redox-dependent suppressor of stromal ascorbate peroxidase gene expression. Front Plant Sci (2012) 0.80

NAC transcription factor family genes are differentially expressed in rice during infections with Rice dwarf virus, Rice black-streaked dwarf virus, Rice grassy stunt virus, Rice ragged stunt virus, and Rice transitory yellowing virus. Front Plant Sci (2015) 0.80

Small interfering peptides as a novel way of transcriptional control. Plant Signal Behav (2008) 0.80

HHP1, a novel signalling component in the cross-talk between the cold and osmotic signalling pathways in Arabidopsis. J Exp Bot (2010) 0.79

The Proteasome Stress Regulon Is Controlled by a Pair of NAC Transcription Factors in Arabidopsis. Plant Cell (2016) 0.78

Membrane-mediated salt stress signaling in flowering time control. Plant Signal Behav (2007) 0.78

Signal peptide peptidases are expressed in the shoot apex of rice, localized to the endoplasmic reticulum. Plant Cell Rep (2009) 0.78

Regulation of reactive oxygen species generation under drought conditions in Arabidopsis. Plant Signal Behav (2012) 0.78

Genome-Wide Analysis of the NAC Gene Family in Physic Nut (Jatropha curcas L.). PLoS One (2015) 0.78

Gibberellic acid-mediated salt signaling in seed germination. Plant Signal Behav (2008) 0.77

Molecular Characterization and Expression Profiling of NAC Transcription Factors in Brachypodium distachyon L. PLoS One (2015) 0.77

Membrane-tethered transcription factors provide a connection between stress response and developmental pathways. Plant Signal Behav (2011) 0.77

Comparative Genomics of NAC Transcriptional Factors in Angiosperms: Implications for the Adaptation and Diversification of Flowering Plants. PLoS One (2015) 0.76

The ABI4-induced Arabidopsis ANAC060 transcription factor attenuates ABA signaling and renders seedlings sugar insensitive when present in the nucleus. PLoS Genet (2014) 0.76

Characterization and expression profile of CaNAC2 pepper gene. Front Plant Sci (2015) 0.76

Evolutionary and Functional Analysis of Membrane-Bound NAC Transcription Factor Genes in Soybean. Plant Physiol (2016) 0.75

ANAC005 is a membrane-associated transcription factor and regulates vascular development in Arabidopsis. J Integr Plant Biol (2015) 0.75

Membrane-triggered plant immunity. Plant Signal Behav (2014) 0.75

Biofuel Potential of Plants Transformed Genetically with NAC Family Genes. Front Plant Sci (2016) 0.75

Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078. PLoS Genet (2016) 0.75

NTL8 regulates trichome formation in Arabidopsis by directly activating R3 MYB genes TRY and TCL1. Plant Physiol (2017) 0.75

Articles cited by this

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J (1998) 97.93

NF-kappa B and Rel proteins: evolutionarily conserved mediators of immune responses. Annu Rev Immunol (1998) 21.48

GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol (2004) 19.29

Salt and drought stress signal transduction in plants. Annu Rev Plant Biol (2002) 13.94

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science (2000) 11.68

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science (2003) 8.65

Regulated intramembrane proteolysis: a control mechanism conserved from bacteria to humans. Cell (2000) 8.29

Two transmembrane aspartates in presenilin-1 required for presenilin endoproteolysis and gamma-secretase activity. Nature (1999) 8.28

Distinct roles of CONSTANS target genes in reproductive development of Arabidopsis. Science (2000) 8.00

The ubiquitin 26S proteasome proteolytic pathway. Annu Rev Plant Biol (2004) 6.16

Functional analysis of cyclin-dependent kinase inhibitors of Arabidopsis. Plant Cell (2001) 4.62

Adaptations to Environmental Stresses. Plant Cell (1995) 4.60

Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter. Plant Cell (2004) 4.53

Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes Dev (2000) 4.46

NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci (2005) 4.34

ARAMEMNON, a novel database for Arabidopsis integral membrane proteins. Plant Physiol (2003) 4.15

Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res (2003) 4.01

Activation of a membrane-bound transcription factor by regulated ubiquitin/proteasome-dependent processing. Cell (2000) 3.97

MicroRNA regulation of NAC-domain targets is required for proper formation and separation of adjacent embryonic, vegetative, and floral organs. Curr Biol (2004) 3.63

A homolog of NO APICAL MERISTEM is an immediate target of the floral homeotic genes APETALA3/PISTILLATA. Cell (1998) 3.63

Dissection of floral induction pathways using global expression analysis. Development (2003) 3.43

A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway. Plant J (2004) 3.31

Regulation of nuclear localization: a key to a door. Annu Rev Cell Dev Biol (1999) 2.74

Virus-encoded suppressor of posttranscriptional gene silencing targets a maintenance step in the silencing pathway. Proc Natl Acad Sci U S A (2000) 2.66

The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins. Trends Plant Sci (2003) 2.57

Molecular responses to drought and cold stress. Curr Opin Biotechnol (1996) 2.47

An Arabidopsis transcription factor, AtbZIP60, regulates the endoplasmic reticulum stress response in a manner unique to plants. Proc Natl Acad Sci U S A (2005) 2.23

Evolution in stressful environments. I. Phenotypic variability, phenotypic selection, and response to selection in five distinct environmental stresses. Evolution (2000) 2.15

The salicylic acid loop in plant defense. Curr Opin Plant Biol (2003) 2.09

Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily. Plant Mol Biol (2002) 2.02

Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. Plant J (2003) 1.89

A membrane-bound NAC transcription factor regulates cell division in Arabidopsis. Plant Cell (2006) 1.80

Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors. EMBO Rep (2004) 1.72

Membrane-bound transcription factors: regulated release by RIP or RUP. Curr Opin Cell Biol (2001) 1.61

A "Whirly" transcription factor is required for salicylic acid-dependent disease resistance in Arabidopsis. Dev Cell (2004) 1.57

Retracted HOS10 encodes an R2R3-type MYB transcription factor essential for cold acclimation in plants. Proc Natl Acad Sci U S A (2005) 1.51

Membrane topology of S2P, a protein required for intramembranous cleavage of sterol regulatory element-binding proteins. J Biol Chem (1999) 1.43

Involvement of Arabidopsis thaliana ribosomal protein S27 in mRNA degradation triggered by genotoxic stress. EMBO J (1999) 1.43

A role for the ubiquitin-26S-proteasome pathway in gibberellin signaling. Trends Plant Sci (2003) 1.42

CUC1 gene activates the expression of SAM-related genes to induce adventitious shoot formation. Plant J (2003) 1.38

Phytocalpain controls the proliferation and differentiation fates of cells in plant organ development. Plant J (2004) 0.99

Computational prediction of membrane-tethered transcription factors. Genome Biol (2001) 0.93

Membrane biology: membrane-regulated transcription. Curr Biol (2000) 0.92

Influence of orange juice over the genotoxicity induced by alkylating agents: an in vivo analysis. Mutagenesis (2005) 0.91

Articles by these authors

High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell (2011) 2.77

Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR. BMC Plant Biol (2008) 2.73

The GIGANTEA-regulated microRNA172 mediates photoperiodic flowering independent of CONSTANS in Arabidopsis. Plant Cell (2007) 2.53

GH3-mediated auxin homeostasis links growth regulation with stress adaptation response in Arabidopsis. J Biol Chem (2007) 1.96

Brachypodium as a model for the grasses: today and the future. Plant Physiol (2011) 1.93

microRNA-directed cleavage of ATHB15 mRNA regulates vascular development in Arabidopsis inflorescence stems. Plant J (2005) 1.92

A membrane-bound NAC transcription factor regulates cell division in Arabidopsis. Plant Cell (2006) 1.80

The MYB96 transcription factor regulates cuticular wax biosynthesis under drought conditions in Arabidopsis. Plant Cell (2011) 1.70

The MYB96 transcription factor mediates abscisic acid signaling during drought stress response in Arabidopsis. Plant Physiol (2009) 1.69

The Arabidopsis NAC transcription factor VNI2 integrates abscisic acid signals into leaf senescence via the COR/RD genes. Plant Cell (2011) 1.63

A new Arabidopsis gene, FLK, encodes an RNA binding protein with K homology motifs and regulates flowering time via FLOWERING LOCUS C. Plant Cell (2004) 1.56

Structural and functional insights into Dom34, a key component of no-go mRNA decay. Mol Cell (2007) 1.54

Arabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis. Plant Cell (2012) 1.53

A self-regulatory circuit of CIRCADIAN CLOCK-ASSOCIATED1 underlies the circadian clock regulation of temperature responses in Arabidopsis. Plant Cell (2012) 1.43

Membrane-bound transcription factors in plants. Trends Plant Sci (2008) 1.35

Cold activation of a plasma membrane-tethered NAC transcription factor induces a pathogen resistance response in Arabidopsis. Plant J (2009) 1.34

MIR166/165 genes exhibit dynamic expression patterns in regulating shoot apical meristem and floral development in Arabidopsis. Planta (2006) 1.33

A membrane-bound NAC transcription factor NTL8 regulates gibberellic acid-mediated salt signaling in Arabidopsis seed germination. Plant J (2008) 1.33

MYB96-mediated abscisic acid signals induce pathogen resistance response by promoting salicylic acid biosynthesis in Arabidopsis. New Phytol (2010) 1.29

Two splice variants of the IDD14 transcription factor competitively form nonfunctional heterodimers which may regulate starch metabolism. Nat Commun (2011) 1.27

A membrane-associated NAC transcription factor regulates salt-responsive flowering via FLOWERING LOCUS T in Arabidopsis. Planta (2007) 1.23

A NAC transcription factor NTL4 promotes reactive oxygen species production during drought-induced leaf senescence in Arabidopsis. Plant J (2012) 1.22

A phytochrome-associated protein phosphatase 2A modulates light signals in flowering time control in Arabidopsis. Plant Cell (2002) 1.21

HD-ZIP III activity is modulated by competitive inhibitors via a feedback loop in Arabidopsis shoot apical meristem development. Plant Cell (2008) 1.18

Regulation of leaf senescence by NTL9-mediated osmotic stress signaling in Arabidopsis. Mol Cells (2008) 1.12

PP7 is a positive regulator of blue light signaling in Arabidopsis. Plant Cell (2003) 1.11

Modulation of sugar metabolism by an INDETERMINATE DOMAIN transcription factor contributes to photoperiodic flowering in Arabidopsis. Plant J (2010) 1.10

An Arabidopsis senescence-associated protein SAG29 regulates cell viability under high salinity. Planta (2010) 1.09

The SOC1-SPL module integrates photoperiod and gibberellic acid signals to control flowering time in Arabidopsis. Plant J (2011) 1.05

miR172 signals are incorporated into the miR156 signaling pathway at the SPL3/4/5 genes in Arabidopsis developmental transitions. Plant Mol Biol (2011) 1.05

Expression of Arabidopsis pathogenesis-related genes during nematode infection. Mol Plant Pathol (2010) 1.05

Integration of auxin and salt signals by the NAC transcription factor NTM2 during seed germination in Arabidopsis. Plant Physiol (2011) 1.04

Radiological spectrum of hepatic mesenchymal hamartoma in children. Korean J Radiol (2007) 1.03

Competitive inhibition of transcription factors by small interfering peptides. Trends Plant Sci (2011) 1.03

Molecular and functional profiling of Arabidopsis pathogenesis-related genes: insights into their roles in salt response of seed germination. Plant Cell Physiol (2008) 1.03

The E3 ubiquitin ligase HOS1 regulates Arabidopsis flowering by mediating CONSTANS degradation under cold stress. J Biol Chem (2012) 1.02

Progressive mesenteric lymphadenopathy with protein-losing enteropathy; a devastating complication in Gaucher disease. Mol Genet Metab (2011) 1.02

An Arabidopsis GH3 gene, encoding an auxin-conjugating enzyme, mediates phytochrome B-regulated light signals in hypocotyl growth. Plant Cell Physiol (2007) 1.01

Acute necrotizing encephalopathy in Korean infants and children: imaging findings and diverse clinical outcome. Korean J Radiol (2004) 1.01

The cold signaling attenuator HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE1 activates FLOWERING LOCUS C transcription via chromatin remodeling under short-term cold stress in Arabidopsis. Plant Cell (2013) 1.00

Genome-scale screening and molecular characterization of membrane-bound transcription factors in Arabidopsis and rice. Genomics (2009) 0.99

Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor in Arabidopsis. J Biol Chem (2010) 0.98

Identification and molecular characterization of a Brachypodium distachyon GIGANTEA gene: functional conservation in monocot and dicot plants. Plant Mol Biol (2009) 0.98

Crystal structure of a cyanobacterial phytochrome response regulator. Protein Sci (2002) 0.98

Optimization of conditions for transient Agrobacterium-mediated gene expression assays in Arabidopsis. Plant Cell Rep (2009) 0.97

Salicylic acid promotes seed germination under high salinity by modulating antioxidant activity in Arabidopsis. New Phytol (2010) 0.96

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 October 2009-30 November 2009. Mol Ecol Resour (2010) 0.96

Arabidopsis RNA-binding protein FCA regulates microRNA172 processing in thermosensory flowering. J Biol Chem (2012) 0.93

Activation of a flavin monooxygenase gene YUCCA7 enhances drought resistance in Arabidopsis. Planta (2011) 0.93

Alternative splicing and nonsense-mediated decay of circadian clock genes under environmental stress conditions in Arabidopsis. BMC Plant Biol (2014) 0.92

SHORT VEGETATIVE PHASE (SVP) protein negatively regulates miR172 transcription via direct binding to the pri-miR172a promoter in Arabidopsis. FEBS Lett (2012) 0.92

Controlled nuclear import of the transcription factor NTL6 reveals a cytoplasmic role of SnRK2.8 in the drought-stress response. Biochem J (2012) 0.90

Noncontact proximity vital sign sensor based on PLL for sensitivity enhancement. IEEE Trans Biomed Circuits Syst (2013) 0.89

Mycoplasma pneumoniae pneumonia: CT features in 16 patients. Eur Radiol (2005) 0.89

Helicobacter pylori proinflammatory protein up-regulates NF-kappaB as a cell-translocating Ser/Thr kinase. Proc Natl Acad Sci U S A (2010) 0.89

Deciphering herbivory-induced gene-to-metabolite dynamics in Nicotiana attenuata tissues using a multifactorial approach. Plant Physiol (2013) 0.88

The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis. J Biol Chem (2012) 0.88

Root jasmonic acid synthesis and perception regulate folivore-induced shoot metabolites and increase Nicotiana attenuata resistance. New Phytol (2014) 0.87

Auxin homeostasis during lateral root development under drought condition. Plant Signal Behav (2009) 0.86

Proteolytic processing of an Arabidopsis membrane-bound NAC transcription factor is triggered by cold-induced changes in membrane fluidity. Biochem J (2010) 0.86

Down-regulation of the IbEXP1 gene enhanced storage root development in sweetpotato. J Exp Bot (2012) 0.85

CCA1 alternative splicing as a way of linking the circadian clock to temperature response in Arabidopsis. Plant Signal Behav (2012) 0.84

Targeted inactivation of transcription factors by overexpression of their truncated forms in plants. Plant J (2012) 0.84