Published in Nucleic Acids Res on February 06, 2007
From one amino acid to another: tRNA-dependent amino acid biosynthesis. Nucleic Acids Res (2008) 1.88
On the evolution of the tRNA-dependent amidotransferases, GatCAB and GatDE. J Mol Biol (2008) 1.05
Two distinct regions in Staphylococcus aureus GatCAB guarantee accurate tRNA recognition. Nucleic Acids Res (2009) 1.00
Structure of an archaeal non-discriminating glutamyl-tRNA synthetase: a missing link in the evolution of Gln-tRNAGln formation. Nucleic Acids Res (2010) 0.98
Crystal structure of a transfer-ribonucleoprotein particle that promotes asparagine formation. EMBO J (2010) 0.97
Insights into tRNA-dependent amidotransferase evolution and catalysis from the structure of the Aquifex aeolicus enzyme. J Mol Biol (2009) 0.97
Structural conservation of an ancient tRNA sensor in eukaryotic glutaminyl-tRNA synthetase. Nucleic Acids Res (2011) 0.96
The structure of yeast glutaminyl-tRNA synthetase and modeling of its interaction with tRNA. J Mol Biol (2013) 0.90
Utilization of protein intrinsic disorder knowledge in structural proteomics. Biochim Biophys Acta (2012) 0.89
tRNA acceptor stem and anticodon bases form independent codes related to protein folding. Proc Natl Acad Sci U S A (2015) 0.84
Evolutionary insights about bacterial GlxRS from whole genome analyses: is GluRS2 a chimera? BMC Evol Biol (2014) 0.81
Amino acid modifications on tRNA. Acta Biochim Biophys Sin (Shanghai) (2008) 0.81
Emergence and evolution. Top Curr Chem (2014) 0.78
Combining multi-mutant and modular thermodynamic cycles to measure energetic coupling networks in enzyme catalysis. Struct Dyn (2017) 0.77
Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem (1987) 281.19
Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr (1998) 169.28
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers (1983) 99.69
AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. J Biomol NMR (1996) 29.55
The Jalview Java alignment editor. Bioinformatics (2004) 21.74
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science (1999) 8.01
Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution. Science (1989) 7.35
Evaluation of comparative protein modeling by MODELLER. Proteins (1995) 6.42
ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Res (2004) 5.19
Two distinct cytokines released from a human aminoacyl-tRNA synthetase. Science (1999) 4.04
Aminoacyl-tRNA synthetases: general features and recognition of transfer RNAs. Annu Rev Biochem (1979) 3.72
Glu-tRNAGln amidotransferase: a novel heterotrimeric enzyme required for correct decoding of glutamine codons during translation. Proc Natl Acad Sci U S A (1997) 3.13
The genome sequence of the extreme thermophile Thermus thermophilus. Nat Biotechnol (2004) 2.95
Anticodon and acceptor stem nucleotides in tRNA(Gln) are major recognition elements for E. coli glutaminyl-tRNA synthetase. Nature (1991) 2.39
Structural and functional relationships between aminoacyl-tRNA synthetases. Trends Biochem Sci (1992) 2.33
Glutamyl-tRNA(Gln) amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis. Proc Natl Acad Sci U S A (1998) 2.26
Domain-specific recruitment of amide amino acids for protein synthesis. Nature (2000) 2.21
Modular arrangement of functional domains along the sequence of an aminoacyl tRNA synthetase. Nature (1984) 2.04
Aminoacyl-tRNA synthetases. Curr Opin Struct Biol (1997) 1.90
Evolution of the Glx-tRNA synthetase family: the glutaminyl enzyme as a case of horizontal gene transfer. Proc Natl Acad Sci U S A (1994) 1.87
A single glutamyl-tRNA synthetase aminoacylates tRNAGlu and tRNAGln in Bacillus subtilis and efficiently misacylates Escherichia coli tRNAGln1 in vitro. J Bacteriol (1986) 1.75
tRNA-dependent active site assembly in a class I aminoacyl-tRNA synthetase. Structure (2003) 1.73
Footprints of aminoacyl-tRNA synthetases are everywhere. Trends Biochem Sci (2000) 1.70
Structural basis for tRNA-dependent amidotransferase function. Structure (2005) 1.68
Ammonia channel couples glutaminase with transamidase reactions in GatCAB. Science (2006) 1.67
The aminoacyl-tRNA synthetase family: modules at work. Bioessays (1993) 1.64
Ribozyme processed tRNA transcripts with unfriendly internal promoter for T7 RNA polymerase: production and activity. FEBS Lett (1998) 1.63
Interactions between tRNA identity nucleotides and their recognition sites in glutaminyl-tRNA synthetase determine the cognate amino acid affinity of the enzyme. Proc Natl Acad Sci U S A (1996) 1.58
The adaptor hypothesis revisited. Trends Biochem Sci (2000) 1.56
The p43 component of the mammalian multi-synthetase complex is likely to be the precursor of the endothelial monocyte-activating polypeptide II cytokine. J Biol Chem (1997) 1.54
Characterization of a novel tumor-derived cytokine. Endothelial-monocyte activating polypeptide II. J Biol Chem (1994) 1.49
Amino acid discrimination by a class I aminoacyl-tRNA synthetase specified by negative determinants. J Mol Biol (2003) 1.47
Structural basis of RNA-dependent recruitment of glutamine to the genetic code. Science (2006) 1.45
Cys-tRNA(Pro) editing by Haemophilus influenzae YbaK via a novel synthetase.YbaK.tRNA ternary complex. J Biol Chem (2005) 1.39
A domain in the N-terminal extension of class IIb eukaryotic aminoacyl-tRNA synthetases is important for tRNA binding. EMBO J (2000) 1.34
A single amidotransferase forms asparaginyl-tRNA and glutaminyl-tRNA in Chlamydia trachomatis. J Biol Chem (2001) 1.32
Recognition of bases in Escherichia coli tRNA(Gln) by glutaminyl-tRNA synthetase: a complete identity set. EMBO J (1992) 1.31
The bacterial YbaK protein is a Cys-tRNAPro and Cys-tRNA Cys deacylase. J Biol Chem (2005) 1.24
A single tRNA base pair mediates bacterial tRNA-dependent biosynthesis of asparagine. Nucleic Acids Res (2006) 1.19
Regulation of endothelial monocyte-activating polypeptide II release by apoptosis. Proc Natl Acad Sci U S A (1998) 1.18
Identity of prokaryotic and eukaryotic tRNA(Asp) for aminoacylation by aspartyl-tRNA synthetase from Thermus thermophilus. Biochemistry (1996) 1.13
A dual-specific Glu-tRNA(Gln) and Asp-tRNA(Asn) amidotransferase is involved in decoding glutamine and asparagine codons in Acidithiobacillus ferrooxidans. FEBS Lett (2001) 1.03
The function of ribosomal protein S21 in protein synthesis. Eur J Biochem (1981) 1.01
A nuclear genetic lesion affecting Saccharomyces cerevisiae mitochondrial translation is complemented by a homologous Bacillus gene. J Bacteriol (1997) 0.99
Glutaminyl-tRNA synthetase. Biol Chem (1997) 0.96
Study of the arrangement of the functional domains along the yeast cytoplasmic aspartyl-tRNA synthetase. Eur J Biochem (1989) 0.94
The twenty aminoacyl-tRNA synthetases from Escherichia coli. General separation procedure, and comparison of the influence of pH and divalent cations on their catalytic activities. Biochimie (1979) 0.92
Glutaminyl-tRNA synthetase: from genetics to molecular recognition. Genes Cells (1996) 0.80
Crystallization and preliminary X-ray characterization of the atypical glutaminyl-tRNA synthetase from Deinococcus radiodurans. Acta Crystallogr D Biol Crystallogr (2004) 0.77
Mutation of the mitochondrial tyrosyl-tRNA synthetase gene, YARS2, causes myopathy, lactic acidosis, and sideroblastic anemia--MLASA syndrome. Am J Hum Genet (2010) 2.07
Crystal structures of the Pyrococcus abyssi Sm core and its complex with RNA. Common features of RNA binding in archaea and eukarya. J Biol Chem (2002) 1.52
Toward the full set of human mitochondrial aminoacyl-tRNA synthetases: characterization of AspRS and TyrRS. Biochemistry (2005) 1.50
Structural insights into viral determinants of nematode mediated Grapevine fanleaf virus transmission. PLoS Pathog (2011) 1.46
When contemporary aminoacyl-tRNA synthetases invent their cognate amino acid metabolism. Proc Natl Acad Sci U S A (2003) 1.40
The transamidosome: a dynamic ribonucleoprotein particle dedicated to prokaryotic tRNA-dependent asparagine biosynthesis. Mol Cell (2007) 1.37
Microfluidic chips for the crystallization of biomacromolecules by counter-diffusion and on-chip crystal X-ray analysis. Lab Chip (2009) 1.29
Structural elements defining elongation factor Tu mediated suppression of codon ambiguity. Nucleic Acids Res (2007) 1.21
A single tRNA base pair mediates bacterial tRNA-dependent biosynthesis of asparagine. Nucleic Acids Res (2006) 1.19
Structure of transfer RNAs: similarity and variability. Wiley Interdiscip Rev RNA (2011) 1.18
Crystal structure of 3WJ core revealing divalent ion-promoted thermostability and assembly of the Phi29 hexameric motor pRNA. RNA (2013) 1.14
Virus-encoded aminoacyl-tRNA synthetases: structural and functional characterization of mimivirus TyrRS and MetRS. J Virol (2007) 1.13
Atypical archaeal tRNA pyrrolysine transcript behaves towards EF-Tu as a typical elongator tRNA. Nucleic Acids Res (2004) 1.11
Yeast mitochondrial Gln-tRNA(Gln) is generated by a GatFAB-mediated transamidation pathway involving Arc1p-controlled subcellular sorting of cytosolic GluRS. Genes Dev (2009) 1.11
Physical aspects of protein crystal growth investigated with the Advanced Protein Crystallization Facility in reduced-gravity environments. Acta Crystallogr D Biol Crystallogr (2002) 1.10
Crystallization of biological macromolecules using agarose gel. Acta Crystallogr D Biol Crystallogr (2002) 1.08
Crystal structure of human mitochondrial tyrosyl-tRNA synthetase reveals common and idiosyncratic features. Structure (2007) 1.07
An aminoacyl-tRNA synthetase-like protein encoded by the Escherichia coli yadB gene glutamylates specifically tRNAAsp. Proc Natl Acad Sci U S A (2004) 1.06
Non-discriminating and discriminating aspartyl-tRNA synthetases differ in the anticodon-binding domain. EMBO J (2003) 1.05
Expression of metazoan replication-dependent histone genes. Biochimie (2005) 1.05
The Escherichia coli YadB gene product reveals a novel aminoacyl-tRNA synthetase like activity. J Mol Biol (2004) 1.05
Crystal growth of proteins, nucleic acids, and viruses in gels. Prog Biophys Mol Biol (2009) 1.04
Evolution of the tRNA(Tyr)/TyrRS aminoacylation systems. Biochimie (2005) 1.04
tRNA-dependent asparagine formation in prokaryotes: characterization, isolation and structural and functional analysis of a ribonucleoprotein particle generating Asn-tRNA(Asn). Methods (2008) 1.02
Dual-targeted tRNA-dependent amidotransferase ensures both mitochondrial and chloroplastic Gln-tRNAGln synthesis in plants. Proc Natl Acad Sci U S A (2008) 1.01
tRNAs and tRNA mimics as cornerstones of aminoacyl-tRNA synthetase regulations. Biochimie (2005) 0.99
Yeast aspartyl-tRNA synthetase binds specifically its own mRNA. J Mol Biol (2003) 0.98
Crystal structure of a transfer-ribonucleoprotein particle that promotes asparagine formation. EMBO J (2010) 0.97
Glu-Q-tRNA(Asp) synthetase coded by the yadB gene, a new paralog of aminoacyl-tRNA synthetase that glutamylates tRNA(Asp) anticodon. Biochimie (2005) 0.95
Structural insights into protein-only RNase P complexed with tRNA. Nat Commun (2013) 0.95
Pathology-related substitutions in human mitochondrial tRNA(Ile) reduce precursor 3' end processing efficiency in vitro. Nucleic Acids Res (2003) 0.94
tRNA-like structure regulates translation of Brome mosaic virus RNA. J Virol (2004) 0.94
On the role of an unusual tRNAGly isoacceptor in Staphylococcus aureus. Biochimie (2008) 0.94
Towards atomic resolution with crystals grown in gel: the case of thaumatin seen at room temperature. Proteins (2002) 0.94
A minimalist glutamyl-tRNA synthetase dedicated to aminoacylation of the tRNAAsp QUC anticodon. Nucleic Acids Res (2004) 0.93
Human mitochondrial TyrRS disobeys the tyrosine identity rules. RNA (2005) 0.92
Crystallization in the presence of glycerol displaces water molecules in the structure of thaumatin. Acta Crystallogr D Biol Crystallogr (2002) 0.89
Lessons from crystals grown in the Advanced Protein Crystallisation Facility for conventional crystallisation applied to structural biology. Biophys Chem (2005) 0.89
Comparative analysis of space-grown and earth-grown crystals of an aminoacyl-tRNA synthetase: space-grown crystals are more useful for structural determination. Acta Crystallogr D Biol Crystallogr (2002) 0.89
Evidence for the existence in mRNAs of a hairpin element responsible for ribosome dependent pyrrolysine insertion into proteins. Biochimie (2005) 0.89
tRNA-balanced expression of a eukaryal aminoacyl-tRNA synthetase by an mRNA-mediated pathway. EMBO Rep (2005) 0.88
Crystal contacts engineering of aspartyl-tRNA synthetase from Thermus thermophilus: effects on crystallizability. Acta Crystallogr D Biol Crystallogr (2002) 0.87
Binding of tobramycin leads to conformational changes in yeast tRNA(Asp) and inhibition of aminoacylation. EMBO J (2002) 0.87
Structure of thaumatin in a hexagonal space group: comparison of packing contacts in four crystal lattices. Acta Crystallogr D Biol Crystallogr (2003) 0.87
Crystal structure of glutamyl-queuosine tRNAAsp synthetase complexed with L-glutamate: structural elements mediating tRNA-independent activation of glutamate and glutamylation of tRNAAsp anticodon. J Mol Biol (2008) 0.87
Riboswitch (T-box)-mediated control of tRNA-dependent amidation in Clostridium acetobutylicum rationalizes gene and pathway redundancy for asparagine and asparaginyl-trnaasn synthesis. J Biol Chem (2012) 0.87
Yeast tRNA(Asp) charging accuracy is threatened by the N-terminal extension of aspartyl-tRNA synthetase. J Biol Chem (2002) 0.86
Binding of human SLBP on the 3'-UTR of histone precursor H4-12 mRNA induces structural rearrangements that enable U7 snRNA anchoring. Nucleic Acids Res (2006) 0.85
Transfer RNA recognition by class I lysyl-tRNA synthetase from the Lyme disease pathogen Borrelia burgdorferi. FEBS Lett (2005) 0.85
Arc1p: anchoring, routing, coordinating. FEBS Lett (2010) 0.85
Gln-tRNAGln synthesis in a dynamic transamidosome from Helicobacter pylori, where GluRS2 hydrolyzes excess Glu-tRNAGln. Nucleic Acids Res (2011) 0.85
Functional idiosyncrasies of tRNA isoacceptors in cognate and noncognate aminoacylation systems. Biochimie (2004) 0.84
Protein analysis by dynamic light scattering: methods and techniques for students. Biochem Mol Biol Educ (2012) 0.84
Peculiar inhibition of human mitochondrial aspartyl-tRNA synthetase by adenylate analogs. Biochimie (2009) 0.83
Translating organellar glutamine codons: a case by case scenario? RNA Biol (2009) 0.83
The asparagine-transamidosome from Helicobacter pylori: a dual-kinetic mode in non-discriminating aspartyl-tRNA synthetase safeguards the genetic code. Nucleic Acids Res (2012) 0.83
Isolation, crystallization and preliminary X-ray analysis of the transamidosome, a ribonucleoprotein involved in asparagine formation. Acta Crystallogr Sect F Struct Biol Cryst Commun (2009) 0.83
Thermodynamic properties distinguish human mitochondrial aspartyl-tRNA synthetase from bacterial homolog with same 3D architecture. Nucleic Acids Res (2012) 0.83
Two-codon T-box riboswitch binding two tRNAs. Proc Natl Acad Sci U S A (2013) 0.83
Genetic code expansion. Nat Struct Biol (2003) 0.82
Comparative proteomics as a new tool for exploring human mitochondrial tRNA disorders. Biochemistry (2002) 0.82
Crystal structure of the archaeal asparagine synthetase: interrelation with aspartyl-tRNA and asparaginyl-tRNA synthetases. J Mol Biol (2011) 0.82
An intricate RNA structure with two tRNA-derived motifs directs complex formation between yeast aspartyl-tRNA synthetase and its mRNA. J Mol Biol (2005) 0.82
Idiosyncratic behaviour of tRNA-like structures in translation of plant viral RNA genomes. J Mol Biol (2005) 0.82
A yeast arginine specific tRNA is a remnant aspartate acceptor. Nucleic Acids Res (2004) 0.81
Tertiary network in mammalian mitochondrial tRNAAsp revealed by solution probing and phylogeny. Nucleic Acids Res (2009) 0.81
Decreased aminoacylation in pathology-related mutants of mitochondrial tRNATyr is associated with structural perturbations in tRNA architecture. RNA (2008) 0.80
A tRNA-independent mechanism for transamidosome assembly promotes aminoacyl-tRNA transamidation. J Biol Chem (2012) 0.79
Loss of a primordial identity element for a mammalian mitochondrial aminoacylation system. J Biol Chem (2006) 0.79
Tyrosyl-tRNA synthetase: the first crystallization of a human mitochondrial aminoacyl-tRNA synthetase. Acta Crystallogr Sect F Struct Biol Cryst Commun (2007) 0.79
Biocrystallography: past, present, future. HFSP J (2010) 0.78
Crystallization and preliminary X-ray diffraction data of an archaeal asparagine synthetase related to asparaginyl-tRNA synthetase. Acta Crystallogr D Biol Crystallogr (2004) 0.78
An online social network to increase walking in dog owners: a randomized trial. Med Sci Sports Exerc (2015) 0.78
Re-designed N-terminus enhances expression, solubility and crystallizability of mitochondrial protein. Protein Eng Des Sel (2012) 0.78