Published in Mol Microbiol on April 01, 2007
Dynamics of Pseudomonas aeruginosa genome evolution. Proc Natl Acad Sci U S A (2008) 3.45
Dynamics of genome rearrangement in bacterial populations. PLoS Genet (2008) 2.78
The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen. BMC Genomics (2008) 2.40
Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors. BMC Genomics (2011) 1.75
Chromosome structuring limits genome plasticity in Escherichia coli. PLoS Genet (2007) 1.40
The dif/Xer recombination systems in proteobacteria. PLoS One (2009) 1.28
Comparative analysis of the first complete Enterococcus faecium genome. J Bacteriol (2012) 1.27
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence. BMC Genomics (2010) 1.24
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110. BMC Genomics (2012) 1.21
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics (2010) 1.20
Microviridae goes temperate: microvirus-related proviruses reside in the genomes of Bacteroidetes. PLoS One (2011) 1.18
The adaptation of temperate bacteriophages to their host genomes. Mol Biol Evol (2012) 1.13
The unconventional Xer recombination machinery of Streptococci/Lactococci. PLoS Genet (2007) 1.11
Complete genome sequence and comparative analysis of Acetobacter pasteurianus 386B, a strain well-adapted to the cocoa bean fermentation ecosystem. BMC Genomics (2013) 1.02
Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes. BMC Genomics (2011) 0.97
An attenuated strain of Bacillus anthracis (CDC 684) has a large chromosomal inversion and altered growth kinetics. BMC Genomics (2011) 0.96
Tracking of chromosome and replisome dynamics in Myxococcus xanthus reveals a novel chromosome arrangement. PLoS Genet (2013) 0.92
Xer site-specific recombination, an efficient tool to introduce unmarked deletions into mycobacteria. Appl Environ Microbiol (2010) 0.92
Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees. Genome Biol Evol (2015) 0.86
Ecological adaptation in bacteria: speciation driven by codon selection. Mol Biol Evol (2012) 0.83
Complete genome sequence of Enterococcus mundtii QU 25, an efficient L-(+)-lactic acid-producing bacterium. DNA Res (2014) 0.81
Chromosome organization and replisome dynamics in Mycobacterium smegmatis. MBio (2015) 0.81
Asymmetry indices for analysis and prediction of replication origins in eukaryotic genomes. PLoS One (2012) 0.78
Validation of bacterial replication termination models using simulation of genomic mutations. PLoS One (2012) 0.78
Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites: what's the Dif? Mol Microbiol (2007) 0.78
Control regions for chromosome replication are conserved with respect to sequence and location among Escherichia coli strains. Front Microbiol (2015) 0.77
Genome analysis coupled with physiological studies reveals a diverse nitrogen metabolism in Methylocystis sp. strain SC2. PLoS One (2013) 0.76
Tn917 targets the region where DNA replication terminates in Bacillus subtilis, highlighting a difference in chromosome processing in the firmicutes. J Bacteriol (2009) 0.76
Replication Termination: Containing Fork Fusion-Mediated Pathologies in Escherichia coli. Genes (Basel) (2016) 0.76
Genome informatics and vaccine targets in Corynebacterium urealyticum using two whole genomes, comparative genomics, and reverse vaccinology. BMC Genomics (2015) 0.75
The progression of replication forks at natural replication barriers in live bacteria. Nucleic Acids Res (2016) 0.75
Linear chromosomes in bacteria: no straight edge advantage? Environ Microbiol (2007) 0.75
Quantitative analysis of correlation between AT and GC biases among bacterial genomes. PLoS One (2017) 0.75
Origins of highly mosaic mycobacteriophage genomes. Cell (2003) 9.78
Opinion: Re-evaluating prokaryotic species. Nat Rev Microbiol (2005) 7.19
Prokaryotic evolution in light of gene transfer. Mol Biol Evol (2002) 6.53
Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform. PLoS Genet (2006) 4.69
Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size. J Mol Biol (2010) 3.12
Reconciling the many faces of lateral gene transfer. Trends Microbiol (2002) 1.84
Protozoan predation, diversifying selection, and the evolution of antigenic diversity in Salmonella. Proc Natl Acad Sci U S A (2004) 1.66
Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus. Environ Microbiol (2007) 1.58
Temporal fragmentation of speciation in bacteria. Science (2007) 1.57
Selection for chromosome architecture in bacteria. J Mol Evol (2006) 1.36
Complete genomic sequence of the virulent Salmonella bacteriophage SP6. J Bacteriol (2004) 1.24
Detecting laterally transferred genes: use of entropic clustering methods and genome position. Nucleic Acids Res (2007) 1.22
Phylogenetic incongruence arising from fragmented speciation in enteric bacteria. Proc Natl Acad Sci U S A (2010) 1.20
Use of artificial genomes in assessing methods for atypical gene detection. PLoS Comput Biol (2005) 1.11
The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process. Mol Biol Evol (2006) 1.10
Differential Salmonella survival against communities of intestinal amoebae. Microbiology (2007) 1.03
Detection of genomic islands via segmental genome heterogeneity. Nucleic Acids Res (2009) 0.95
Towards more robust methods of alien gene detection. Nucleic Acids Res (2011) 0.89
Rapid divergence of two classes of Haemophilus ducreyi. J Bacteriol (2011) 0.84
Ecological adaptation in bacteria: speciation driven by codon selection. Mol Biol Evol (2012) 0.83
Two transsulfurylation pathways in Klebsiella pneumoniae. J Bacteriol (2006) 0.79
Quantification of codon selection for comparative bacterial genomics. BMC Genomics (2011) 0.79
Detecting laterally transferred genes. Methods Mol Biol (2012) 0.78
Genetic manipulation of pathogenicity loci in non-Typhimurium Salmonella. J Microbiol Methods (2012) 0.75