Published in PLoS One on February 03, 2017
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc (2009) 137.99
Lateral gene transfer and the nature of bacterial innovation. Nature (2000) 20.98
Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae. Nucleic Acids Res (1996) 10.46
Asymmetric substitution patterns in the two DNA strands of bacteria. Mol Biol Evol (1996) 7.18
Universal trees based on large combined protein sequence data sets. Nat Genet (2001) 4.63
Analyzing genomes with cumulative skew diagrams. Nucleic Acids Res (1998) 3.71
Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes. BMC Bioinformatics (2008) 3.65
Consequences of replication fork movement through transcription units in vivo. Science (1992) 2.70
Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms. Gene (1999) 2.40
Head-on collision between a DNA replication apparatus and RNA polymerase transcription complex. Science (1995) 2.21
Mutational bias suggests that replication termination occurs near the dif site, not at Ter sites. Mol Microbiol (2007) 2.06
Phylogeny: a non-hyperthermophilic ancestor for bacteria. Nature (2002) 1.78
DoriC: a database of oriC regions in bacterial genomes. Bioinformatics (2007) 1.74
Two essential DNA polymerases at the bacterial replication fork. Science (2001) 1.66
DoriC 5.0: an updated database of oriC regions in both bacterial and archaeal genomes. Nucleic Acids Res (2012) 1.59
The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes. J Mol Evol (2000) 1.58
Thermophilic bacteria strictly obey Szybalski's transcription direction rule and politely purine-load RNAs with both adenine and guanine. Genome Res (2000) 1.43
Comparative analysis of four Campylobacterales. Nat Rev Microbiol (2004) 1.41
Replication-associated purine asymmetry may contribute to strand-biased gene distribution. Genomics (2007) 1.15
GC skew in protein-coding genes between the leading and lagging strands in bacterial genomes: new substitution models incorporating strand bias. J Theor Biol (2008) 1.13
Nucleotide compositional asymmetry between the leading and lagging strands of eubacterial genomes. Res Microbiol (2010) 0.98
Recent Advances in the Identification of Replication Origins Based on the Z-curve Method. Curr Genomics (2014) 0.94
Comprehensive analysis of DNA polymerase III α subunits and their homologs in bacterial genomes. Nucleic Acids Res (2013) 0.91
Modeling compositional dynamics based on GC and purine contents of protein-coding sequences. Biol Direct (2010) 0.88
Association of purine asymmetry, strand-biased gene distribution and PolC within Firmicutes and beyond: a new appraisal. BMC Genomics (2014) 0.83
A Brief Review: The Z-curve Theory and its Application in Genome Analysis. Curr Genomics (2014) 0.83
Replicating strand asymmetry in bacterial and eukaryotic genomes. Curr Genomics (2012) 0.82
Bug mapping and fitness testing of chemically synthesized chromosome X. Science (2017) 0.90
Complete Genome Sequence of the Industrial Bacterium Ketogulonicigenium vulgare SKV. Genome Announc (2016) 0.75