Published in Curr Opin Plant Biol on April 16, 2007
Regulatory features underlying pollination-dependent and -independent tomato fruit set revealed by transcript and primary metabolite profiling. Plant Cell (2009) 1.79
Metabolic and developmental adaptations of growing potato tubers in response to specific manipulations of the adenylate energy status. Plant Physiol (2008) 1.10
Arabidopsis sucrose synthase 2 and 3 modulate metabolic homeostasis and direct carbon towards starch synthesis in developing seeds. Planta (2010) 0.95
An update on source-to-sink carbon partitioning in tomato. Front Plant Sci (2014) 0.88
Do Cecidomyiidae galls of Aspidosperma spruceanum (Apocynaceae) fit the pre-established cytological and histochemical patterns? Protoplasma (2010) 0.88
Analysis of subcellular metabolite levels of potato tubers (Solanum tuberosum) displaying alterations in cellular or extracellular sucrose metabolism. Metabolomics (2008) 0.85
The use of natural genetic diversity in the understanding of metabolic organization and regulation. Front Plant Sci (2011) 0.84
Cytological and histochemical gradients on two Copaifera langsdorffii Desf. (Fabaceae)--Cecidomyiidae gall systems. Protoplasma (2011) 0.82
Plants modify biological processes to ensure survival following carbon depletion: a Lolium perenne model. PLoS One (2010) 0.81
Transcriptome analysis suggests that starch synthesis may proceed via multiple metabolic routes in high yielding potato cultivars. PLoS One (2012) 0.76
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res (2012) 7.48
GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics (2004) 7.33
Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat Protoc (2006) 6.33
Comprehensive metabolic profiling and phenotyping of interspecific introgression lines for tomato improvement. Nat Biotechnol (2006) 4.47
Sucrose efflux mediated by SWEET proteins as a key step for phloem transport. Science (2011) 3.66
PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. BMC Bioinformatics (2006) 3.34
GC-MS libraries for the rapid identification of metabolites in complex biological samples. FEBS Lett (2005) 3.29
Metabolic priming by a secreted fungal effector. Nature (2011) 2.56
Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiol (2006) 2.55
Pyrimidine and purine biosynthesis and degradation in plants. Annu Rev Plant Biol (2006) 2.48
Starch as a major integrator in the regulation of plant growth. Proc Natl Acad Sci U S A (2009) 2.47
Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development. Plant Physiol (2003) 2.40
Zooming in on a quantitative trait for tomato yield using interspecific introgressions. Science (2004) 2.37
Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde. Proc Natl Acad Sci U S A (2006) 2.30
Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation. Proc Natl Acad Sci U S A (2008) 2.26
Photorespiration: players, partners and origin. Trends Plant Sci (2010) 2.23
PlaNet: combined sequence and expression comparisons across plant networks derived from seven species. Plant Cell (2011) 2.13
Highway or byway: the metabolic role of the GABA shunt in plants. Trends Plant Sci (2007) 2.12
Evolution and metabolic significance of the urea cycle in photosynthetic diatoms. Nature (2011) 2.06
Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiol (2006) 2.01
Metabolic regulation underlying tomato fruit development. J Exp Bot (2006) 2.01
Not just a circle: flux modes in the plant TCA cycle. Trends Plant Sci (2010) 1.96
Reprogramming a maize plant: transcriptional and metabolic changes induced by the fungal biotroph Ustilago maydis. Plant J (2008) 1.94
Tissue- and cell-type specific transcriptome profiling of expanding tomato fruit provides insights into metabolic and regulatory specialization and cuticle formation. Plant Cell (2011) 1.88
Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function. Plant J (2007) 1.84
Robin: an intuitive wizard application for R-based expression microarray quality assessment and analysis. Plant Physiol (2010) 1.82
Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells. Plant Cell (2003) 1.80
Regulatory features underlying pollination-dependent and -independent tomato fruit set revealed by transcript and primary metabolite profiling. Plant Cell (2009) 1.79
Parallel analysis of transcript and metabolic profiles: a new approach in systems biology. EMBO Rep (2003) 1.76
The flavonoid biosynthetic pathway in Arabidopsis: structural and genetic diversity. Plant Physiol Biochem (2013) 1.76
JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis. Plant Cell (2012) 1.75
Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiol (2005) 1.75
Metabolic and signaling aspects underpinning the regulation of plant carbon nitrogen interactions. Mol Plant (2010) 1.75
On the origins of nitric oxide. Trends Plant Sci (2010) 1.69
Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. Plant Cell Environ (2013) 1.69
A reevaluation of the key factors that influence tomato fruit softening and integrity. Plant Physiol (2007) 1.66
Metabolic profiling of leaves and fruit of wild species tomato: a survey of the Solanum lycopersicum complex. J Exp Bot (2004) 1.66
Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proc Natl Acad Sci U S A (2013) 1.63
Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria. Plant Cell (2010) 1.63
Glycolytic enzymes associate dynamically with mitochondria in response to respiratory demand and support substrate channeling. Plant Cell (2007) 1.62
Recommendations for reporting metabolite data. Plant Cell (2011) 1.61
Plant metabolomics: towards biological function and mechanism. Trends Plant Sci (2006) 1.61
Simultaneous application of heat, drought, and virus to Arabidopsis plants reveals significant shifts in signaling networks. Plant Physiol (2013) 1.61
Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening. Plant Cell (2011) 1.57
Mode of inheritance of primary metabolic traits in tomato. Plant Cell (2008) 1.56
From measurements of metabolites to metabolomics: an 'on the fly' perspective illustrated by recent studies of carbon-nitrogen interactions. Curr Opin Biotechnol (2003) 1.56
The use of metabolomics to dissect plant responses to abiotic stresses. Cell Mol Life Sci (2012) 1.55
Reconfiguration of the achene and receptacle metabolic networks during strawberry fruit development. Plant Physiol (2008) 1.53
Reduced expression of aconitase results in an enhanced rate of photosynthesis and marked shifts in carbon partitioning in illuminated leaves of wild species tomato. Plant Physiol (2003) 1.52
Impact of altered gibberellin metabolism on biomass accumulation, lignin biosynthesis, and photosynthesis in transgenic tobacco plants. Plant Physiol (2004) 1.52
Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf. Plant Mol Biol (2006) 1.52
Combining genetic diversity, informatics and metabolomics to facilitate annotation of plant gene function. Nat Protoc (2010) 1.51
Systems biology of tomato fruit development: combined transcript, protein, and metabolite analysis of tomato transcription factor (nor, rin) and ethylene receptor (Nr) mutants reveals novel regulatory interactions. Plant Physiol (2011) 1.51
The stomatal response to reduced relative humidity requires guard cell-autonomous ABA synthesis. Curr Biol (2012) 1.48
The critical role of Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase during dark-induced starvation. Plant Cell (2005) 1.47
A bypass of sucrose synthase leads to low internal oxygen and impaired metabolic performance in growing potato tubers. Plant Physiol (2003) 1.46
Evolution, structure and function of mitochondrial carriers: a review with new insights. Plant J (2011) 1.45
Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Funct Integr Genomics (2008) 1.44
Developmental stage specificity and the role of mitochondrial metabolism in the response of Arabidopsis leaves to prolonged mild osmotic stress. Plant Physiol (2009) 1.44
The metabolic response of heterotrophic Arabidopsis cells to oxidative stress. Plant Physiol (2006) 1.43
Light-responsive metabolite and transcript levels are maintained following a dark-adaptation period in leaves of Arabidopsis thaliana. New Phytol (2012) 1.43
Seed desiccation: a bridge between maturation and germination. Trends Plant Sci (2010) 1.43
Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants. Ann Bot (2008) 1.43
Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions. Plant Cell (2010) 1.41
Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis. Plant Cell (2009) 1.41
Molecular regulation of seed and fruit set. Trends Plant Sci (2012) 1.40
Malate plays a crucial role in starch metabolism, ripening, and soluble solid content of tomato fruit and affects postharvest softening. Plant Cell (2011) 1.40
Systems analysis of a maize leaf developmental gradient redefines the current C4 model and provides candidates for regulation. Plant Cell (2011) 1.38
Kinetics of labelling of organic and amino acids in potato tubers by gas chromatography-mass spectrometry following incubation in (13)C labelled isotopes. Plant J (2004) 1.37
Metabolic fluxes in an illuminated Arabidopsis rosette. Plant Cell (2013) 1.36
Mitochondrial uncoupling protein is required for efficient photosynthesis. Proc Natl Acad Sci U S A (2006) 1.35
High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to eight environmental conditions. Plant J (2011) 1.34
Sucrose transporter LeSUT1 and LeSUT2 inhibition affects tomato fruit development in different ways. Plant J (2006) 1.33
Vitamin deficiencies in humans: can plant science help? Plant Cell (2012) 1.33
Protein degradation - an alternative respiratory substrate for stressed plants. Trends Plant Sci (2011) 1.33
Rice endosperm iron biofortification by targeted and synergistic action of nicotianamine synthase and ferritin. Plant Biotechnol J (2009) 1.33
Nonsupervised construction and application of mass spectral and retention time index libraries from time-of-flight gas chromatography-mass spectrometry metabolite profiles. Methods Mol Biol (2007) 1.32
A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis. Plant Cell (2008) 1.32
Glycolysis and the tricarboxylic acid cycle are linked by alanine aminotransferase during hypoxia induced by waterlogging of Lotus japonicus. Plant Physiol (2010) 1.32
Starch content and yield increase as a result of altering adenylate pools in transgenic plants. Nat Biotechnol (2002) 1.30
Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis. Plant Cell Environ (2008) 1.30
GDP-D-mannose 3,5-epimerase (GME) plays a key role at the intersection of ascorbate and non-cellulosic cell-wall biosynthesis in tomato. Plant J (2009) 1.27
Combined transcript and metabolite profiling of Arabidopsis leaves reveals fundamental effects of the thiol-disulfide status on plant metabolism. Plant Physiol (2006) 1.26
Specific roles of alpha- and gamma-tocopherol in abiotic stress responses of transgenic tobacco. Plant Physiol (2007) 1.26
Reduced expression of succinyl-coenzyme A ligase can be compensated for by up-regulation of the gamma-aminobutyrate shunt in illuminated tomato leaves. Plant Physiol (2007) 1.25
The mitochondrial electron transfer flavoprotein complex is essential for survival of Arabidopsis in extended darkness. Plant J (2006) 1.24
AtABCG29 is a monolignol transporter involved in lignin biosynthesis. Curr Biol (2012) 1.23
Manipulation of plant innate immunity and gibberellin as factor of compatibility in the mutualistic association of barley roots with Piriformospora indica. Plant J (2009) 1.23
Web-based resources for mass-spectrometry-based metabolomics: a user's guide. Phytochemistry (2009) 1.22
Vitamin B1 biosynthesis in plants requires the essential iron sulfur cluster protein, THIC. Proc Natl Acad Sci U S A (2007) 1.22
Decrease in manganese superoxide dismutase leads to reduced root growth and affects tricarboxylic acid cycle flux and mitochondrial redox homeostasis. Plant Physiol (2008) 1.22
Cell wall-bound invertase limits sucrose export and is involved in symptom development and inhibition of photosynthesis during compatible interaction between tomato and Xanthomonas campestris pv vesicatoria. Plant Physiol (2008) 1.21
Silencing of the mitochondrial ascorbate synthesizing enzyme L-galactono-1,4-lactone dehydrogenase affects plant and fruit development in tomato. Plant Physiol (2007) 1.21
RNAi-mediated tocopherol deficiency impairs photoassimilate export in transgenic potato plants. Plant Physiol (2004) 1.21
Alteration of organic acid metabolism in Arabidopsis overexpressing the maize C4 NADP-malic enzyme causes accelerated senescence during extended darkness. Plant Physiol (2007) 1.21
Two Arabidopsis threonine aldolases are nonredundant and compete with threonine deaminase for a common substrate pool. Plant Cell (2006) 1.20
Plant-microbe interactions to probe regulation of plant carbon metabolism. J Plant Physiol (2005) 1.19
HSP70 and its cochaperone CPIP promote potyvirus infection in Nicotiana benthamiana by regulating viral coat protein functions. Plant Cell (2010) 1.19