PubRank

Daniel H Huson

Author PubWeight™ 83.69‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 2007 9.85
2 A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Science 2002 9.59
3 Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA. Science 2005 8.14
4 MetaSim: a sequencing simulator for genomics and metagenomics. PLoS One 2008 6.54
5 Whole-genome shotgun assembly and comparison of human genome assemblies. Proc Natl Acad Sci U S A 2004 6.08
6 Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS One 2008 4.54
7 Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs). Nucleic Acids Res 2005 4.15
8 OSLay: optimal syntenic layout of unfinished assemblies. Bioinformatics 2007 4.10
9 Reference-guided assembly of four diverse Arabidopsis thaliana genomes. Proc Natl Acad Sci U S A 2011 2.67
10 The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus). Genome Res 2009 2.30
11 Whole-genome prokaryotic phylogeny. Bioinformatics 2004 2.26
12 Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution. BMC Evol Biol 2007 1.97
13 Visual and statistical comparison of metagenomes. Bioinformatics 2009 1.94
14 Evolution of Arabidopsis thaliana microRNAs from random sequences. RNA 2008 1.50
15 Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG. BMC Bioinformatics 2011 1.48
16 Comparative analysis of four Campylobacterales. Nat Rev Microbiol 2004 1.41
17 Identification of plant microRNA homologs. Bioinformatics 2005 1.35
18 Constructing splits graphs. IEEE/ACM Trans Comput Biol Bioinform 2006 1.33
19 Drawing explicit phylogenetic networks and their integration into SplitsTree. BMC Evol Biol 2008 1.30
20 CREST--classification resources for environmental sequence tags. PLoS One 2012 1.28
21 COPYCAT: cophylogenetic analysis tool. Bioinformatics 2007 1.25
22 Comparison of multiple metagenomes using phylogenetic networks based on ecological indices. ISME J 2010 1.23
23 Short clones or long clones? A simulation study on the use of paired reads in metagenomics. BMC Bioinformatics 2010 1.07
24 Analysis of 16S rRNA environmental sequences using MEGAN. BMC Genomics 2011 1.03
25 Fast computation of minimum hybridization networks. Bioinformatics 2011 1.02
26 LOCAS--a low coverage assembly tool for resequencing projects. PLoS One 2011 0.99
27 Tanglegrams for rooted phylogenetic trees and networks. Bioinformatics 2011 0.94
28 Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing. BMC Genomics 2013 0.88
29 Identifying a species tree subject to random lateral gene transfer. J Theor Biol 2013 0.84
30 Improved layout of phylogenetic networks. IEEE/ACM Trans Comput Biol Bioinform 2008 0.82
31 Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees. Syst Biol 2008 0.82
32 VisRD--visual recombination detection. Bioinformatics 2004 0.78
33 CrossLink: visualization and exploration of sequence relationships between (micro) RNAs. Nucleic Acids Res 2006 0.75