Published in Science on July 26, 2007
Recent speciation associated with the evolution of selfing in Capsella. Proc Natl Acad Sci U S A (2009) 1.83
The Capsella rubella genome and the genomic consequences of rapid mating system evolution. Nat Genet (2013) 1.69
Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. Proc Natl Acad Sci U S A (2009) 1.57
De novo sequence assembly and characterization of the floral transcriptome in cross- and self-fertilizing plants. BMC Genomics (2011) 1.49
Patterns of molecular evolution in Caenorhabditis preclude ancient origins of selfing. Genetics (2008) 1.37
Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis. Plant Physiol (2011) 1.32
Quantifying the variation in the effective population size within a genome. Genetics (2011) 1.23
Independent S-locus mutations caused self-fertility in Arabidopsis thaliana. PLoS Genet (2009) 1.23
Selection on amino acid substitutions in Arabidopsis. Mol Biol Evol (2008) 1.23
Extensive structural renovation of retrogenes in the evolution of the Populus genome. Plant Physiol (2009) 1.18
Evolution of self-compatibility in Arabidopsis by a mutation in the male specificity gene. Nature (2010) 1.18
Epigenetic and epigenomic variation in Arabidopsis thaliana. Trends Plant Sci (2012) 1.15
Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis. Genetics (2008) 1.13
The evolutionary history of the Arabidopsis lyrata complex: a hybrid in the amphi-Beringian area closes a large distribution gap and builds up a genetic barrier. BMC Evol Biol (2010) 1.12
Mating-system variation, demographic history and patterns of nucleotide diversity in the Tristylous plant Eichhornia paniculata. Genetics (2009) 1.08
High DNA sequence diversity in pericentromeric genes of the plant Arabidopsis lyrata. Genetics (2008) 1.07
Understanding plant reproductive diversity. Philos Trans R Soc Lond B Biol Sci (2010) 1.05
The ARC1 E3 ligase gene is frequently deleted in self-compatible Brassicaceae species and has a conserved role in Arabidopsis lyrata self-pollen rejection. Plant Cell (2012) 1.02
A dual role for the S-locus receptor kinase in self-incompatibility and pistil development revealed by an Arabidopsis rdr6 mutation. Plant Cell (2009) 1.02
Plant sexual reproduction during climate change: gene function in natura studied by ecological and evolutionary systems biology. Ann Bot (2011) 0.99
Arabidopsis and relatives as models for the study of genetic and genomic incompatibilities. Philos Trans R Soc Lond B Biol Sci (2010) 0.96
Sporophytic self-incompatibility genes and mating system variation in Arabis alpina. Ann Bot (2011) 0.94
Speciation and introgression between Mimulus nasutus and Mimulus guttatus. PLoS Genet (2014) 0.92
Possible diversifying selection in the imprinted gene, MEDEA, in Arabidopsis. Mol Biol Evol (2009) 0.91
Evolution of the S-locus region in Arabidopsis relatives. Plant Physiol (2011) 0.91
The ARC1 E3 Ligase Promotes Two Different Self-Pollen Avoidance Traits in Arabidopsis. Plant Cell (2014) 0.90
Contrasted patterns of molecular evolution in dominant and recessive self-incompatibility haplotypes in Arabidopsis. PLoS Genet (2012) 0.89
A cryptic cytoplasmic male sterility unveils a possible gynodioecious past for Arabidopsis thaliana. PLoS One (2013) 0.88
The predominantly selfing plant Arabidopsis thaliana experienced a recent reduction in transposable element abundance compared to its outcrossing relative Arabidopsis lyrata. Mob DNA (2012) 0.86
Recent loss of self-incompatibility by degradation of the male component in allotetraploid Arabidopsis kamchatica. PLoS Genet (2012) 0.85
Molecular genetics, physiology and biology of self-incompatibility in Brassicaceae. Proc Jpn Acad Ser B Phys Biol Sci (2012) 0.84
Mating system shifts and transposable element evolution in the plant genus Capsella. BMC Genomics (2014) 0.83
Molecular characterization and evolution of self-incompatibility genes in Arabidopsis thaliana: the case of the Sc haplotype. Genetics (2013) 0.83
Microbial genetics: Love the one you're with. Nature (2009) 0.83
Robust self-incompatibility in the absence of a functional ARC1 gene in Arabidopsis thaliana. Plant Cell (2014) 0.82
Sexual plasticity and self-fertilization in the sea anemone Aiptasia diaphana. PLoS One (2010) 0.82
Self-incompatibility in Brassicaceae crops: lessons for interspecific incompatibility. Breed Sci (2014) 0.81
Multiple independent origins of auto-pollination in tropical orchids (Bulbophyllum) in light of the hypothesis of selfing as an evolutionary dead end. BMC Evol Biol (2015) 0.79
Planting molecular functions in an ecological context with Arabidopsis thaliana. Elife (2015) 0.78
Identification and Evolution of Functional Alleles of the Previously Described Pollen Specific Myrosinase Pseudogene AtTGG6 in Arabidopsis thaliana. Int J Mol Sci (2016) 0.77
Progress and Promise in using Arabidopsis to Study Adaptation, Divergence, and Speciation. Arabidopsis Book (2010) 0.77
Commonalities and differences between Brassica and Arabidopsis self-incompatibility. Hortic Res (2014) 0.76
Sexual and apomictic plant reproduction in the genomics era: exploring the mechanisms potentially useful in crop plants. Sex Plant Reprod (2010) 0.76
Genome sequencing reveals the origin of the allotetraploid Arabidopsis suecica. Mol Biol Evol (2017) 0.75
Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development. PLoS Genet (2016) 0.75
Transcriptomes of Plant Gametophytes Have a Higher Proportion of Rapidly Evolving and Young Genes than Sporophytes. Mol Biol Evol (2016) 0.75
Evidence for Adaptive Introgression of Disease Resistance Genes Among Closely Related Arabidopsis Species. G3 (Bethesda) (2017) 0.75
Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science (2003) 39.19
Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes. Nat Genet (2007) 19.04
A gene expression map of Arabidopsis thaliana development. Nat Genet (2005) 17.39
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. Nat Genet (2009) 16.53
Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls. Nature (2010) 12.27
Control of leaf morphogenesis by microRNAs. Nature (2003) 11.36
Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature (2010) 10.66
The pattern of polymorphism in Arabidopsis thaliana. PLoS Biol (2005) 10.13
Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science (2007) 9.85
Target mimicry provides a new mechanism for regulation of microRNA activity. Nat Genet (2007) 9.48
Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies. Lancet (2011) 9.10
Specific effects of microRNAs on the plant transcriptome. Dev Cell (2005) 8.48
Sequencing of natural strains of Arabidopsis thaliana with short reads. Genome Res (2008) 8.44
Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. Nat Genet (2008) 7.71
Shared and distinct genetic variants in type 1 diabetes and celiac disease. N Engl J Med (2008) 7.66
Criteria for annotation of plant MicroRNAs. Plant Cell (2008) 7.49
Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell (2006) 7.06
An Arabidopsis example of association mapping in structured samples. PLoS Genet (2006) 7.03
Whole-genome sequencing of multiple Arabidopsis thaliana populations. Nat Genet (2011) 6.59
Dense genotyping identifies and localizes multiple common and rare variant association signals in celiac disease. Nat Genet (2011) 6.36
Integration of spatial and temporal information during floral induction in Arabidopsis. Science (2005) 6.24
Large-scale genetic fine mapping and genotype-phenotype associations implicate polymorphism in the IL2RA region in type 1 diabetes. Nat Genet (2007) 6.11
Large-scale identification of single-feature polymorphisms in complex genomes. Genome Res (2003) 6.04
Recombination and linkage disequilibrium in Arabidopsis thaliana. Nat Genet (2007) 5.69
Markov chain Monte Carlo without likelihoods. Proc Natl Acad Sci U S A (2003) 5.67
The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis. Cell (2009) 5.52
The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana. Science (2010) 5.19
Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature (2011) 5.13
The extent of linkage disequilibrium in Arabidopsis thaliana. Nat Genet (2002) 4.96
miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana. Cell (2009) 4.95
A robust statistical method for case-control association testing with copy number variation. Nat Genet (2008) 4.78
A single IGF1 allele is a major determinant of small size in dogs. Science (2007) 4.68
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proc Natl Acad Sci U S A (2009) 4.65
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat Genet (2011) 4.65
Autoimmune response as a mechanism for a Dobzhansky-Muller-type incompatibility syndrome in plants. PLoS Biol (2007) 4.30
Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes. PLoS Genet (2005) 4.25
SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nat Methods (2009) 4.01
The UK10K project identifies rare variants in health and disease. Nature (2015) 3.89
Antagonistic regulation of PIN phosphorylation by PP2A and PINOID directs auxin flux. Cell (2007) 3.84
Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. Nature (2011) 3.66
Multiplexed shotgun genotyping for rapid and efficient genetic mapping. Genome Res (2011) 3.63
Cell-specific protein phenotypes for the autoimmune locus IL2RA using a genotype-selectable human bioresource. Nat Genet (2009) 3.59
Genome-wide analysis of allelic expression imbalance in human primary cells by high-throughput transcriptome resequencing. Hum Mol Genet (2010) 3.50
Dissection of floral induction pathways using global expression analysis. Development (2003) 3.43
Dissection of the genetics of Parkinson's disease identifies an additional association 5' of SNCA and multiple associated haplotypes at 17q21. Hum Mol Genet (2010) 3.34
Phosphoinositide 3-kinase δ gene mutation predisposes to respiratory infection and airway damage. Science (2013) 3.33
Role of FRIGIDA and FLOWERING LOCUS C in determining variation in flowering time of Arabidopsis. Plant Physiol (2005) 3.31
The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature (2011) 3.29
Next-generation genetics in plants. Nature (2008) 3.27
Genealogical trees, coalescent theory and the analysis of genetic polymorphisms. Nat Rev Genet (2002) 3.24
Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease. Nat Biotechnol (2013) 3.20
Comprehensive interaction map of the Arabidopsis MADS Box transcription factors. Plant Cell (2005) 3.12
The scale of population structure in Arabidopsis thaliana. PLoS Genet (2010) 3.12
A promiscuous intermediate underlies the evolution of LEAFY DNA binding specificity. Science (2014) 3.11
The PHYTOCHROME C photoreceptor gene mediates natural variation in flowering and growth responses of Arabidopsis thaliana. Nat Genet (2006) 3.11
Control of jasmonate biosynthesis and senescence by miR319 targets. PLoS Biol (2008) 3.09
Transcriptional control of gene expression by microRNAs. Cell (2010) 3.05
Gene silencing in plants using artificial microRNAs and other small RNAs. Plant J (2008) 3.03
An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations. Nat Genet (2012) 3.03
Evolution of metal hyperaccumulation required cis-regulatory changes and triplication of HMA4. Nature (2008) 3.00
A nonparametric test reveals selection for rapid flowering in the Arabidopsis genome. PLoS Biol (2006) 2.98
A thermosensory pathway controlling flowering time in Arabidopsis thaliana. Nat Genet (2003) 2.95
Sequence and expression differences underlie functional specialization of Arabidopsis microRNAs miR159 and miR319. Dev Cell (2007) 2.90
Haplotype block structure and its applications to association studies: power and study designs. Am J Hum Genet (2002) 2.88
Dual effects of miR156-targeted SPL genes and CYP78A5/KLUH on plastochron length and organ size in Arabidopsis thaliana. Plant Cell (2008) 2.87
Move on up, it's time for change--mobile signals controlling photoperiod-dependent flowering. Genes Dev (2007) 2.82
Simultaneous alignment of short reads against multiple genomes. Genome Biol (2009) 2.79
Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel. Nat Genet (2012) 2.78
Adjust quality scores from alignment and improve sequencing accuracy. Nucleic Acids Res (2004) 2.76
Linkage and association mapping of Arabidopsis thaliana flowering time in nature. PLoS Genet (2010) 2.76
Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2008) 2.74
Diversity of flowering responses in wild Arabidopsis thaliana strains. PLoS Genet (2005) 2.74
PTPN22 Trp620 explains the association of chromosome 1p13 with type 1 diabetes and shows a statistical interaction with HLA class II genotypes. Diabetes (2008) 2.74
Launching eLife, Part 1. Elife (2012) 2.72
Potent induction of Arabidopsis thaliana flowering by elevated growth temperature. PLoS Genet (2006) 2.69
A mixed-model approach for genome-wide association studies of correlated traits in structured populations. Nat Genet (2012) 2.69