Published in Environ Microbiol on October 01, 2007
Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance. PLoS Comput Biol (2012) 2.50
The systemic imprint of growth and its uses in ecological (meta)genomics. PLoS Genet (2010) 1.94
Succession of bacterial populations during plant residue decomposition in rice field soil. Appl Environ Microbiol (2009) 1.38
Dynamics of seed-borne rice endophytes on early plant growth stages. PLoS One (2012) 1.32
Growth of enterococci in unaltered, unseeded beach sands subjected to tidal wetting. Appl Environ Microbiol (2009) 1.26
Differential nutrient limitation of soil microbial biomass and metabolic quotients (qCO2): is there a biological stoichiometry of soil microbes? PLoS One (2013) 1.17
Diversity of 16S-23S rDNA internal transcribed spacer (ITS) reveals phylogenetic relationships in Burkholderia pseudomallei and its near-neighbors. PLoS One (2011) 1.13
Ecology of root colonizing Massilia (Oxalobacteraceae). PLoS One (2012) 1.07
Short-read assembly of full-length 16S amplicons reveals bacterial diversity in subsurface sediments. PLoS One (2013) 1.06
Changes in the bacterial populations of the highly alkaline saline soil of the former lake Texcoco (Mexico) following flooding. Extremophiles (2009) 0.97
Recovery of methanotrophs from disturbance: population dynamics, evenness and functioning. ISME J (2010) 0.97
Decreases in average bacterial community rRNA operon copy number during succession. ISME J (2015) 0.90
Linking activity, composition and seasonal dynamics of atmospheric methane oxidizers in a meadow soil. ISME J (2011) 0.90
Exploiting rRNA operon copy number to investigate bacterial reproductive strategies. Nat Microbiol (2016) 0.87
Pesticide Side Effects in an Agricultural Soil Ecosystem as Measured by amoA Expression Quantification and Bacterial Diversity Changes. PLoS One (2015) 0.84
Changes in soil bacterial community structure with increasing disturbance frequency. Microb Ecol (2013) 0.84
Bacterial communities involved in soil formation and plant establishment triggered by pyrite bioweathering on arctic moraines. Microb Ecol (2010) 0.84
Seasonal dynamics of bacterial and archaeal methanogenic communities in flooded rice fields and effect of drainage. Front Microbiol (2015) 0.83
Complete genome sequence of Acidaminococcus fermentans type strain (VR4). Stand Genomic Sci (2010) 0.82
Microbial Community Structure in the Rhizosphere of Rice Plants. Front Microbiol (2016) 0.80
Variability of rRNA Operon Copy Number and Growth Rate Dynamics of Bacillus Isolated from an Extremely Oligotrophic Aquatic Ecosystem. Front Microbiol (2016) 0.78
Succession and growth strategy of a spring microbial community from kezhou sinter in china. Braz J Microbiol (2011) 0.76
Microdiversity of deep-sea Bacillales isolated from Tyrrhenian sea sediments as revealed by ARISA, 16S rRNA gene sequencing and BOX-PCR fingerprinting. Microbes Environ (2013) 0.76
[Not Available]. Open Microbiol J (2009) 0.75
rRNA Operon Copy Number Can Explain the Distinct Epidemiology of Hospital-Associated Methicillin-Resistant Staphylococcus aureus. Antimicrob Agents Chemother (2016) 0.75
Response of Methanogenic Microbial Communities to Desiccation Stress in Flooded and Rain-Fed Paddy Soil from Thailand. Front Microbiol (2017) 0.75
A genomic perspective on stoichiometric regulation of soil carbon cycling. ISME J (2017) 0.75
Ecological strategies and metabolic trade-offs of complex environmental biofilms. NPJ Biofilms Microbiomes (2017) 0.75
Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia. Nature (2007) 2.12
Phylogenetic analysis and in situ identification of bacteria community composition in an acidic Sphagnum peat bog. Appl Environ Microbiol (2006) 1.99
Succession of bacterial community structure and diversity in a paddy soil oxygen gradient. Environ Microbiol (2005) 1.76
Effects of temperature and fertilizer on activity and community structure of soil ammonia oxidizers. Environ Microbiol (2003) 1.57
Two isozymes of particulate methane monooxygenase with different methane oxidation kinetics are found in Methylocystis sp. strain SC2. Proc Natl Acad Sci U S A (2008) 1.55
Genome of Rice Cluster I archaea--the key methane producers in the rice rhizosphere. Science (2006) 1.43
Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog. Int J Syst Evol Microbiol (2002) 1.40
Methyloferula stellata gen. nov., sp. nov., an acidophilic, obligately methanotrophic bacterium that possesses only a soluble methane monooxygenase. Int J Syst Evol Microbiol (2010) 1.40
Wide distribution of a novel pmoA-like gene copy among type II methanotrophs, and its expression in Methylocystis strain SC2. Appl Environ Microbiol (2003) 1.22
Methylocella tundrae sp. nov., a novel methanotrophic bacterium from acidic tundra peatlands. Int J Syst Evol Microbiol (2004) 1.17
Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. J Bacteriol (2010) 1.16
Isolation of a Methylocystis strain containing a novel pmoA-like gene. FEMS Microbiol Ecol (2002) 1.13
Structure and activity of bacterial community inhabiting rice roots and the rhizosphere. Environ Microbiol (2006) 1.12
Substrate-induced growth and isolation of Acidobacteria from acidic Sphagnum peat. ISME J (2008) 1.12
Phylogenetic diversity and metagenomics of candidate division OP3. Environ Microbiol (2010) 1.06
Bacterial populations and environmental factors controlling cellulose degradation in an acidic Sphagnum peat. Environ Microbiol (2011) 1.05
High diversity of diazotrophs in the forefield of a receding alpine glacier. Microb Ecol (2008) 1.05
Rice Cluster I methanogens, an important group of Archaea producing greenhouse gas in soil. Curr Opin Biotechnol (2006) 1.03
Acetate utilization as a survival strategy of peat-inhabiting Methylocystis spp. Environ Microbiol Rep (2011) 1.03
Transcriptional activity of paddy soil bacterial communities. Environ Microbiol (2008) 1.03
Identification of acetate-assimilating microorganisms under methanogenic conditions in anoxic rice field soil by comparative stable isotope probing of RNA. Appl Environ Microbiol (2006) 1.03
Pyrosequencing-based assessment of the bacteria diversity in surface and subsurface peat layers of a northern wetland, with focus on poorly studied phyla and candidate divisions. PLoS One (2013) 1.02
Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic Sphagnum peat bog. Int J Syst Evol Microbiol (2007) 1.02
Methylotrophic autotrophy in Beijerinckia mobilis. J Bacteriol (2005) 1.02
Methylocystis heyeri sp. nov., a novel type II methanotrophic bacterium possessing 'signature' fatty acids of type I methanotrophs. Int J Syst Evol Microbiol (2007) 1.02
NifH and NifD phylogenies: an evolutionary basis for understanding nitrogen fixation capabilities of methanotrophic bacteria. Microbiology (2004) 1.01
Comparative analysis of the conventional and novel pmo (particulate methane monooxygenase) operons from methylocystis strain SC2. Appl Environ Microbiol (2004) 1.01
Retrieval of first genome data for rice cluster I methanogens by a combination of cultivation and molecular techniques. FEMS Microbiol Ecol (2005) 1.00
Methanocella arvoryzae sp. nov., a hydrogenotrophic methanogen isolated from rice field soil. Int J Syst Evol Microbiol (2010) 0.99
Strain FAc12, a dissimilatory iron-reducing member of the Anaeromyxobacter subgroup of Myxococcales. FEMS Microbiol Ecol (2003) 0.98
Extraction of mRNA from soil. Appl Environ Microbiol (2010) 0.98
Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria. Int J Syst Evol Microbiol (2009) 0.96
Activity and composition of methanotrophic bacterial communities in planted rice soil studied by flux measurements, analyses of pmoA gene and stable isotope probing of phospholipid fatty acids. Environ Microbiol (2007) 0.96
Functional and structural response of the methanogenic microbial community in rice field soil to temperature change. Environ Microbiol (2009) 0.94
Differential detection of type II methanotrophic bacteria in acidic peatlands using newly developed 16S rRNA-targeted fluorescent oligonucleotide probes. FEMS Microbiol Ecol (2003) 0.93
Impact of protists on the activity and structure of the bacterial community in a rice field soil. Appl Environ Microbiol (2006) 0.91
State of the art in human risk assessment of silver compounds in consumer products: a conference report on silver and nanosilver held at the BfR in 2012. Arch Toxicol (2013) 0.91
Telmatocola sphagniphila gen. nov., sp. nov., a novel dendriform planctomycete from northern wetlands. Front Microbiol (2012) 0.90
Linking activity, composition and seasonal dynamics of atmospheric methane oxidizers in a meadow soil. ISME J (2011) 0.90
Complete genome sequence of Methylocystis sp. strain SC2, an aerobic methanotroph with high-affinity methane oxidation potential. J Bacteriol (2012) 0.88
Methanol oxidation by temperate soils and environmental determinants of associated methylotrophs. ISME J (2012) 0.86
Complete genome sequence of Beijerinckia indica subsp. indica. J Bacteriol (2010) 0.84
Response of the methanogenic microbial communities in Amazonian oxbow lake sediments to desiccation stress. Environ Microbiol (2013) 0.84
Complete sequence analysis of two methanotroph-specific repABC-containing plasmids from Methylocystis sp. strain SC2. Appl Environ Microbiol (2012) 0.82
Ammonium induces differential expression of methane and nitrogen metabolism-related genes in Methylocystis sp. strain SC2. Environ Microbiol (2014) 0.82
Rhodoblastus sphagnicola sp. nov., a novel acidophilic purple non-sulfur bacterium from Sphagnum peat bog. Int J Syst Evol Microbiol (2006) 0.81
Isolation of aerobic, gliding, xylanolytic and laminarinolytic bacteria from acidic Sphagnum peatlands and emended description of Chitinophaga arvensicola Kampfer et al. 2006. Int J Syst Evol Microbiol (2006) 0.81
Nitrogen sources of Oligoporus placenta and Trametes versicolor evaluated in a 2(3) experimental plan. Fungal Biol (2011) 0.80
Incorporation of Listeria monocytogenes strains in raw milk biofilms. Int J Food Microbiol (2012) 0.79
First genome data from uncultured upland soil cluster alpha methanotrophs provide further evidence for a close phylogenetic relationship to Methylocapsa acidiphila B2 and for high-affinity methanotrophy involving particulate methane monooxygenase. Appl Environ Microbiol (2005) 0.79
Biodegradation of a biocide (Cu-N-cyclohexyldiazenium dioxide) component of a wood preservative by a defined soil bacterial community. Appl Environ Microbiol (2010) 0.78
Shifts in desulfonating bacterial communities along a soil chronosequence in the forefield of a receding glacier. FEMS Microbiol Ecol (2009) 0.78
Geovibrio thiophilus sp. nov., a novel sulfur-reducing bacterium belonging to the phylum Deferribacteres. Int J Syst Evol Microbiol (2002) 0.78
Genome analysis coupled with physiological studies reveals a diverse nitrogen metabolism in Methylocystis sp. strain SC2. PLoS One (2013) 0.76
[Is the patient's diagnosis correct? "Doctor, my pacemaker has exploded"!]. MMW Fortschr Med (2009) 0.75