Published in Neuroimage on July 13, 2007
Diffusion tensor imaging of deep gray matter brain structures: effects of age and iron concentration. Neurobiol Aging (2008) 1.81
Automatic segmentation of neonatal images using convex optimization and coupled level sets. Neuroimage (2011) 1.51
4D multi-modality tissue segmentation of serial infant images. PLoS One (2012) 1.49
Optimization of functional brain ROIs via maximization of consistency of structural connectivity profiles. Neuroimage (2011) 1.46
Construction of multi-scale consistent brain networks: methods and applications. PLoS One (2015) 1.46
Integration of sparse multi-modality representation and anatomical constraint for isointense infant brain MR image segmentation. Neuroimage (2013) 1.38
Diffusion based abnormality markers of pathology: toward learned diagnostic prediction of ASD. Neuroimage (2011) 1.37
Deep convolutional neural networks for multi-modality isointense infant brain image segmentation. Neuroimage (2015) 1.36
TIMER: tensor image morphing for elastic registration. Neuroimage (2009) 1.33
Axonal fiber terminations concentrate on gyri. Cereb Cortex (2011) 1.18
A computational growth model for measuring dynamic cortical development in the first year of life. Cereb Cortex (2011) 1.17
A collaborative resource to build consensus for automated left ventricular segmentation of cardiac MR images. Med Image Anal (2013) 1.13
Predicting functional cortical ROIs via DTI-derived fiber shape models. Cereb Cortex (2011) 1.10
Connectomics signatures of prenatal cocaine exposure affected adolescent brains. Hum Brain Mapp (2012) 1.05
Individual functional ROI optimization via maximization of group-wise consistency of structural and functional profiles. Neuroinformatics (2012) 1.03
Coevolution of gyral folding and structural connection patterns in primate brains. Cereb Cortex (2012) 0.95
Connectome-scale assessments of structural and functional connectivity in MCI. Hum Brain Mapp (2013) 0.95
Gyral folding pattern analysis via surface profiling. Neuroimage (2010) 0.95
Longitudinal regression analysis of spatial-temporal growth patterns of geometrical diffusion measures in early postnatal brain development with diffusion tensor imaging. Neuroimage (2011) 0.94
Anatomy-guided Dense Individualized and Common Connectivity-based Cortical Landmarks (A-DICCCOL). IEEE Trans Biomed Eng (2014) 0.85
Detecting brain state changes via fiber-centered functional connectivity analysis. Neuroinformatics (2013) 0.85
Fiber-driven resolution enhancement of diffusion-weighted images. Neuroimage (2013) 0.83
Integration of sparse multi-modality representation and geometrical constraint for isointense infant brain segmentation. Med Image Comput Comput Assist Interv (2013) 0.83
A robust variational approach for simultaneous smoothing and estimation of DTI. Neuroimage (2012) 0.82
A functional model of cortical gyri and sulci. Brain Struct Funct (2013) 0.82
Adaptive distance metric learning for diffusion tensor image segmentation. PLoS One (2014) 0.81
Functional consequences of neurite orientation dispersion and density in humans across the adult lifespan. J Neurosci (2015) 0.81
Characterization of U-shape streamline fibers: Methods and applications. Med Image Anal (2014) 0.79
Resting state fMRI-guided fiber clustering: methods and applications. Neuroinformatics (2013) 0.79
Diffusion tensor imaging reveals evolution of primate brain architectures. Brain Struct Funct (2012) 0.79
Characterization of task-free and task-performance brain states via functional connectome patterns. Med Image Anal (2013) 0.78
Signal sampling for efficient sparse representation of resting state FMRI data. Brain Imaging Behav (2016) 0.78
Predictive models of resting state networks for assessment of altered functional connectivity in mild cognitive impairment. Brain Imaging Behav (2014) 0.78
Inferring group-wise consistent multimodal brain networks via multi-view spectral clustering. IEEE Trans Med Imaging (2013) 0.78
Automated brain tissue segmentation based on fractional signal mapping from inversion recovery Look-Locker acquisition. Neuroimage (2010) 0.78
Connectome-scale assessment of structural and functional connectivity in mild traumatic brain injury at the acute stage. Neuroimage Clin (2016) 0.77
An experimental evaluation of diffusion tensor image segmentation using graph-cuts. Conf Proc IEEE Eng Med Biol Soc (2009) 0.77
Group-wise FMRI activation detection on DICCCOL landmarks. Neuroinformatics (2014) 0.76
White matter changes in primary dystonia determined by 2D distribution analysis of diffusion tensor images. J Magn Reson Imaging (2012) 0.76
Diffusion tensor-based fast marching for modeling human brain connectivity network. Comput Med Imaging Graph (2010) 0.76
Brain extraction in pediatric ADC maps, toward characterizing neuro-development in multi-platform and multi-institution clinical images. Neuroimage (2015) 0.76
Brain Tissue Classification Based on Diffusion Tensor Imaging: A Comparative Study Between Some Clustering Algorithms and Their Effect on Different Diffusion Tensor Imaging Scalar Indices. Iran J Radiol (2016) 0.75
Group-wise consistent cortical parcellation based on connectional profiles. Med Image Anal (2016) 0.75
Improvement of partial volume segmentation for brain tissue on diffusion tensor images using multiple-tensor estimation. J Digit Imaging (2013) 0.75
Predicting cortical ROIs via joint modeling of anatomical and connectional profiles. Med Image Anal (2013) 0.75
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Ensemble Clustering using Semidefinite Programming with Applications. Mach Learn (2010) 0.75
A comparative study of theoretical graph models for characterizing structural networks of human brain. Int J Biomed Imaging (2013) 0.75
Epitome driven 3-D Diffusion Tensor image segmentation: on extracting specific structures. Adv Neural Inf Process Syst (2010) 0.75
Mechanisms of circumferential gyral convolution in primate brains. J Comput Neurosci (2017) 0.75
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The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nat Biotechnol (2006) 30.90
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Ethylene biosynthesis and signaling networks. Plant Cell (2002) 5.37
Histone acetylation by Trrap-Tip60 modulates loading of repair proteins and repair of DNA double-strand breaks. Nat Cell Biol (2005) 5.11
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Automated segmentation, classification, and tracking of cancer cell nuclei in time-lapse microscopy. IEEE Trans Biomed Eng (2006) 3.45
Single-layer MoS2 phototransistors. ACS Nano (2011) 3.43
Class II major histocompatibility complex plays an essential role in obesity-induced adipose inflammation. Cell Metab (2013) 3.00
Growth of large-area and highly crystalline MoS2 thin layers on insulating substrates. Nano Lett (2012) 2.81
The Arabidopsis Rop2 GTPase is a positive regulator of both root hair initiation and tip growth. Plant Cell (2002) 2.76
Evaluation of external RNA controls for the assessment of microarray performance. Nat Biotechnol (2006) 2.59
A screen for morphological complexity identifies regulators of switch-like transitions between discrete cell shapes. Nat Cell Biol (2013) 2.59
Novel cell segmentation and online SVM for cell cycle phase identification in automated microscopy. Bioinformatics (2007) 2.54
The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies. BMC Bioinformatics (2008) 2.54
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3D cell nuclei segmentation based on gradient flow tracking. BMC Cell Biol (2007) 2.41
The ROP2 GTPase controls the formation of cortical fine F-actin and the early phase of directional cell expansion during Arabidopsis organogenesis. Plant Cell (2002) 2.38
Towards effective and rewarding data sharing. Neuroinformatics (2003) 2.24
Towards automated cellular image segmentation for RNAi genome-wide screening. Med Image Comput Comput Assist Interv (2005) 2.19
Microarray scanner calibration curves: characteristics and implications. BMC Bioinformatics (2005) 2.02
Cross-platform comparison of SYBR Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC) study. BMC Genomics (2008) 1.99
Genomic analysis of the immune gene repertoire of amphioxus reveals extraordinary innate complexity and diversity. Genome Res (2008) 1.92
Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays. Neuroimage (2007) 1.92
Robust deformable-surface-based skull-stripping for large-scale studies. Med Image Comput Comput Assist Interv (2011) 1.88
DICCCOL: dense individualized and common connectivity-based cortical landmarks. Cereb Cortex (2012) 1.78
An inactivated enterovirus 71 vaccine in healthy children. N Engl J Med (2014) 1.76
In vivo consequences of liver-specific interleukin-22 expression in mice: Implications for human liver disease progression. Hepatology (2011) 1.69
Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis. Elife (2013) 1.64
Single-layer semiconducting nanosheets: high-yield preparation and device fabrication. Angew Chem Int Ed Engl (2011) 1.60
Comparative metagenomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries. ISME J (2010) 1.60
GM130, a cis-Golgi protein, regulates meiotic spindle assembly and asymmetric division in mouse oocyte. Cell Cycle (2011) 1.60
Association between DNA variant sites in the apolipoprotein A5 gene and coronary heart disease in Chinese. Metabolism (2005) 1.58
A computerized cellular imaging system for high content analysis in Monastrol suppressor screens. J Biomed Inform (2005) 1.55
Automated neurite labeling and analysis in fluorescence microscopy images. Cytometry A (2006) 1.53
A novel cell segmentation method and cell phase identification using Markov model. IEEE Trans Inf Technol Biomed (2009) 1.51
Multiple nuclei tracking using integer programming for quantitative cancer cell cycle analysis. IEEE Trans Med Imaging (2009) 1.47
Cellular phenotype recognition for high-content RNA interference genome-wide screening. J Biomol Screen (2008) 1.47
Optimization of functional brain ROIs via maximization of consistency of structural connectivity profiles. Neuroimage (2011) 1.46
Repulsive force based snake model to segment and track neuronal axons in 3D microscopy image stacks. Neuroimage (2006) 1.45
Review of methods for functional brain connectivity detection using fMRI. Comput Med Imaging Graph (2008) 1.44
Reconstruction of central cortical surface from brain MRI images: method and application. Neuroimage (2007) 1.42
Aurora-B mediated ATM serine 1403 phosphorylation is required for mitotic ATM activation and the spindle checkpoint. Mol Cell (2011) 1.40
A web-based federated neuroinformatics model for surgical planning and clinical research applications in epilepsy. Neuroinformatics (2004) 1.40
Context based mixture model for cell phase identification in automated fluorescence microscopy. BMC Bioinformatics (2007) 1.40
Next-generation sequencing in the clinic: promises and challenges. Cancer Lett (2012) 1.39
Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces. BMC Syst Biol (2010) 1.36
Strong induction of PCSK9 gene expression through HNF1alpha and SREBP2: mechanism for the resistance to LDL-cholesterol lowering effect of statins in dyslipidemic hamsters. J Lipid Res (2010) 1.36
A novel tracing algorithm for high throughput imaging Screening of neuron-based assays. J Neurosci Methods (2006) 1.35
Kinetic resolution of 2-oxazolidinones via catalytic, enantioselective N-acylation. J Am Chem Soc (2006) 1.35
The draft genome of the carcinogenic human liver fluke Clonorchis sinensis. Genome Biol (2011) 1.34
Using iterative cluster merging with improved gap statistics to perform online phenotype discovery in the context of high-throughput RNAi screens. BMC Bioinformatics (2008) 1.33
Automatic cortical sulcal parcellation based on surface principal direction flow field tracking. Neuroimage (2009) 1.31
Clinicopathological features and prognosis assessment of extranodal follicular dendritic cell sarcoma. World J Gastroenterol (2010) 1.29
Plasma membrane-associated ROP10 small GTPase is a specific negative regulator of abscisic acid responses in Arabidopsis. Plant Cell (2002) 1.28
Creation of a productive, highly enantioselective nitrilase through gene site saturation mutagenesis (GSSM). J Am Chem Soc (2003) 1.27
The knowledge-integrated network biomarkers discovery for major adverse cardiac events. J Proteome Res (2008) 1.27
76-space analysis of grey matter diffusivity: methods and applications. Neuroimage (2006) 1.26
Zebrafish lacking Alzheimer presenilin enhancer 2 (Pen-2) demonstrate excessive p53-dependent apoptosis and neuronal loss. J Neurochem (2006) 1.23
A subgroup of MYB transcription factor genes undergoes highly conserved alternative splicing in Arabidopsis and rice. J Exp Bot (2006) 1.23
Dendritic spine detection using curvilinear structure detector and LDA classifier. Neuroimage (2007) 1.23
An automated feedback system with the hybrid model of scoring and classification for solving over-segmentation problems in RNAi high content screening. J Microsc (2007) 1.21
A quantitative study of factors affecting in vivo bioluminescence imaging. Luminescence (2008) 1.19
Characterization of a highly efficient blue-shifted channelrhodopsin from the marine alga Platymonas subcordiformis. J Biol Chem (2013) 1.19
An enzyme library approach to biocatalysis: development of nitrilases for enantioselective production of carboxylic acid derivatives. J Am Chem Soc (2002) 1.18
Axonal fiber terminations concentrate on gyri. Cereb Cortex (2011) 1.18
MK2 controls the level of negative feedback in the NF-kappaB pathway and is essential for vascular permeability and airway inflammation. J Exp Med (2007) 1.18
Fabrication of flexible MoS2 thin-film transistor arrays for practical gas-sensing applications. Small (2012) 1.17
The kinetochore protein Bub1 participates in the DNA damage response. DNA Repair (Amst) (2011) 1.17
A computational model of cerebral cortex folding. J Theor Biol (2010) 1.16
Inhibition of glycolytic enzymes mediated by pharmacologically activated p53: targeting Warburg effect to fight cancer. J Biol Chem (2011) 1.16
Multiclass cancer classification by using fuzzy support vector machine and binary decision tree with gene selection. J Biomed Biotechnol (2005) 1.16
Activation of the ATM-Snail pathway promotes breast cancer metastasis. J Mol Cell Biol (2012) 1.16
High or low oxygen saturation and severe retinopathy of prematurity: a meta-analysis. Pediatrics (2010) 1.16
Release of antibiotic resistant bacteria and genes in the effluent and biosolids of five wastewater utilities in Michigan. Water Res (2010) 1.16
Single-layer MoS2-based nanoprobes for homogeneous detection of biomolecules. J Am Chem Soc (2013) 1.15
SAD2, an importin -like protein, is required for UV-B response in Arabidopsis by mediating MYB4 nuclear trafficking. Plant Cell (2007) 1.15
PROX1 promotes hepatocellular carcinoma metastasis by way of up-regulating hypoxia-inducible factor 1α expression and protein stability. Hepatology (2013) 1.14
Occurrence of human adenoviruses at two recreational beaches of the great lakes. Appl Environ Microbiol (2007) 1.14
Intramolecular proton transfer in channelrhodopsins. Biophys J (2013) 1.14
Blurred star image processing for star sensors under dynamic conditions. Sensors (Basel) (2012) 1.14
A hybrid approach to automatic clustering of white matter fibers. Neuroimage (2009) 1.14
Homoharringtonine reduced Mcl-1 expression and induced apoptosis in chronic lymphocytic leukemia. Blood (2010) 1.12
The serine/threonine kinase LKB1 controls thymocyte survival through regulation of AMPK activation and Bcl-XL expression. Cell Res (2009) 1.12
Automatic dendritic spine analysis in two-photon laser scanning microscopy images. Cytometry A (2007) 1.12
Label-free high-resolution imaging of prostate glands and cavernous nerves using coherent anti-Stokes Raman scattering microscopy. Biomed Opt Express (2011) 1.12
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Tracking molecular particles in live cells using fuzzy rule-based system. Cytometry A (2007) 1.11
Support vector machine multiparametric MRI identification of pseudoprogression from tumor recurrence in patients with resected glioblastoma. J Magn Reson Imaging (2011) 1.11
Exploring nitrilase sequence space for enantioselective catalysis. Appl Environ Microbiol (2004) 1.10
Interleukin-1beta enhances the effect of serum deprivation on rat annular cell apoptosis. Apoptosis (2007) 1.10
Predicting functional cortical ROIs via DTI-derived fiber shape models. Cereb Cortex (2011) 1.10
Identification by mutational analysis of amino acid residues essential in the chaperone function of calreticulin. J Biol Chem (2005) 1.10
A novel method of transcriptional response analysis to facilitate drug repositioning for cancer therapy. Cancer Res (2011) 1.09
Evaluation of midkine as a diagnostic serum biomarker in hepatocellular carcinoma. Clin Cancer Res (2013) 1.09
Interlayer breathing and shear modes in few-trilayer MoS2 and WSe2. Nano Lett (2013) 1.08