Published in Ann Bot on October 07, 2007
Plant growth modelling and applications: the increasing importance of plant architecture in growth models. Ann Bot (2008) 2.35
Integration of transport-based models for phyllotaxis and midvein formation. Genes Dev (2009) 2.22
A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution. PLoS Comput Biol (2015) 1.59
Coordination of plant cell division and expansion in a simple morphogenetic system. Proc Natl Acad Sci U S A (2010) 1.52
Live biospeckle laser imaging of root tissues. Eur Biophys J (2009) 1.48
Generation of diverse biological forms through combinatorial interactions between tissue polarity and growth. PLoS Comput Biol (2011) 1.48
Turning a plant tissue into a living cell froth through isotropic growth. Proc Natl Acad Sci U S A (2009) 1.38
Computational morphodynamics: a modeling framework to understand plant growth. Annu Rev Plant Biol (2010) 1.33
Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales. Plant Cell (2012) 1.25
VirtualLeaf: an open-source framework for cell-based modeling of plant tissue growth and development. Plant Physiol (2010) 1.25
Genetic control of organ shape and tissue polarity. PLoS Biol (2010) 1.23
Interlinked nonlinear subnetworks underlie the formation of robust cellular patterns in Arabidopsis epidermis: a dynamic spatial model. BMC Syst Biol (2008) 1.06
Vertex-element models for anisotropic growth of elongated plant organs. Front Plant Sci (2013) 0.89
Oriented cell division shapes carnivorous pitcher leaves of Sarracenia purpurea. Nat Commun (2015) 0.85
Methods for improving simulations of biological systems: systemic computation and fractal proteins. J R Soc Interface (2009) 0.82
Stochasticity in plant cellular growth and patterning. Front Plant Sci (2014) 0.80
A plant cell division algorithm based on cell biomechanics and ellipse-fitting. Ann Bot (2014) 0.78
Mechanical Behavior of Cells within a Cell-Based Model of Wheat Leaf Growth. Front Plant Sci (2016) 0.75
Virtual Plant Tissue: Building Blocks for Next-Generation Plant Growth Simulation. Front Plant Sci (2017) 0.75
Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol (2005) 13.88
Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell (2003) 11.53
Regulation of phyllotaxis by polar auxin transport. Nature (2003) 9.17
Metabolic and physical control of cell elongation rate: in vivo studies in nitella. Plant Physiol (1971) 6.92
Patterns of auxin transport and gene expression during primordium development revealed by live imaging of the Arabidopsis inflorescence meristem. Curr Biol (2005) 6.35
Control of leaf vascular patterning by polar auxin transport. Genes Dev (2006) 4.77
An auxin-driven polarized transport model for phyllotaxis. Proc Natl Acad Sci U S A (2006) 4.41
A plausible model of phyllotaxis. Proc Natl Acad Sci U S A (2006) 4.31
GL3 encodes a bHLH protein that regulates trichome development in arabidopsis through interaction with GL1 and TTG1. Genetics (2000) 3.78
Auxin transport - shaping the plant. Curr Opin Plant Biol (2003) 3.67
Root gravitropism requires lateral root cap and epidermal cells for transport and response to a mobile auxin signal. Nat Cell Biol (2005) 3.61
A gene regulatory network model for cell-fate determination during Arabidopsis thaliana flower development that is robust and recovers experimental gene expression profiles. Plant Cell (2004) 2.94
TRIPTYCHON and CAPRICE mediate lateral inhibition during trichome and root hair patterning in Arabidopsis. EMBO J (2002) 2.92
Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis. Proc Natl Acad Sci U S A (2006) 2.88
Molecular and cellular aspects of auxin-transport-mediated development. Trends Plant Sci (2007) 2.56
Visualizing plant development and gene expression in three dimensions using optical projection tomography. Plant Cell (2006) 2.50
Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem. Bioinformatics (2005) 2.20
Reviewing models of auxin canalization in the context of leaf vein pattern formation in Arabidopsis. Plant J (2005) 2.07
Root responses to soil physical conditions; growth dynamics from field to cell. J Exp Bot (2005) 1.98
Growth and morphogenesis at the vegetative shoot apex of Anagallis arvensis L. J Exp Bot (2003) 1.83
A protocol to analyse cellular dynamics during plant development. Plant J (2005) 1.55
Self-organization of the vascular system in plant leaves: inter-dependent dynamics of auxin flux and carrier proteins. J Theor Biol (2005) 1.51
Analysis of surface growth in shoot apices. Plant J (2002) 1.42
Wall structure and wall loosening. A look backwards and forwards. Plant Physiol (2001) 1.42
Creating a two-dimensional pattern de novo during Arabidopsis trichome and root hair initiation. Curr Opin Genet Dev (2004) 1.40
Biophysical mechanisms for morphogenetic progressions at the shoot apex. Dev Biol (1992) 1.35
Differentiation in plant epidermal cells. J Exp Bot (2000) 1.32
Tissue layer and organ specificity of trichome formation are regulated by GLABRA1 and TRIPTYCHON in Arabidopsis. Development (1998) 1.26
Epidermal differentiation: trichomes in Arabidopsis as a model system. Int J Dev Biol (2005) 1.25
Auxin transport: the fountain of life in plants? Dev Cell (2003) 1.15
Equivalent genetic regulatory networks in different contexts recover contrasting spatial cell patterns that resemble those in Arabidopsis root and leaf epidermis: a dynamic model. Int J Dev Biol (2007) 1.12
New Evidence for the Role of Mechanical Forces in the Shoot Apical Meristem. J Plant Growth Regul (2000) 1.11
Plant signalling: the inexorable rise of auxin. Trends Cell Biol (2006) 0.93
Pattern formation of leaf veins by the positive feedback regulation between auxin flow and auxin efflux carrier. J Theor Biol (2006) 0.92
A cellular growth model for root tips. J Theor Biol (2004) 0.90
Patterning of Arabidopsis epidermal cells: epigenetic factors regulate the complex epidermal cell fate pathway. Trends Plant Sci (2006) 0.90
Robust development as a consequence of generated positional information. J Theor Biol (2003) 0.85
Biological pattern formation: new observations provide support for theoretical predictions. Bioessays (1994) 0.81
Root gravitropism requires lateral root cap and epidermal cells for transport and response to a mobile auxin signal. Nat Cell Biol (2005) 3.61
Shoot Na+ exclusion and increased salinity tolerance engineered by cell type-specific alteration of Na+ transport in Arabidopsis. Plant Cell (2009) 2.37
GAL4-GFP enhancer trap lines for genetic manipulation of lateral root development in Arabidopsis thaliana. J Exp Bot (2005) 1.77
Gibberellin signaling in the endodermis controls Arabidopsis root meristem size. Curr Biol (2009) 1.62
Marking cell lineages in living tissues. Plant J (2005) 1.61
Coordination of plant cell division and expansion in a simple morphogenetic system. Proc Natl Acad Sci U S A (2010) 1.52
Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation. Plant Physiol (2007) 1.48
Time of day modulates low-temperature Ca signals in Arabidopsis. Plant J (2006) 1.39
Integrated genetic and computation methods for in planta cytometry. Nat Methods (2012) 1.36
High-resolution live imaging of plant growth in near physiological bright conditions using light sheet fluorescence microscopy. Plant J (2011) 1.36
A map of KNAT gene expression in the Arabidopsis root. Plant Mol Biol (2006) 1.35
The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells. Dev Cell (2008) 1.35
Computational modeling of synthetic microbial biofilms. ACS Synth Biol (2012) 1.12
Polycomb group genes control developmental timing of endosperm. Plant J (2005) 1.11
A simple way to identify non-viable cells within living plant tissue using confocal microscopy. Plant Methods (2008) 1.07
Spatial control of transgene expression in rice (Oryza sativa L.) using the GAL4 enhancer trapping system. Plant J (2005) 1.04
Armadillo-related proteins promote lateral root development in Arabidopsis. Proc Natl Acad Sci U S A (2006) 1.03
A molecular framework for the inhibition of Arabidopsis root growth in response to boron toxicity. Plant Cell Environ (2011) 1.01
cg12 expression is specifically linked to infection of root hairs and cortical cells during Casuarina glauca and Allocasuarina verticillata actinorhizal nodule development. Mol Plant Microbe Interact (2003) 0.96
Synthetic biology: history, challenges and prospects. J R Soc Interface (2009) 0.95
Arabidopsis thaliana outer ovule integument morphogenesis: ectopic expression of KNAT1 reveals a compensation mechanism. BMC Plant Biol (2008) 0.93
Full-wavelet approach for fluorescence diffuse optical tomography with structured illumination. Opt Lett (2010) 0.93
Cell polarity-driven instability generates self-organized, fractal patterning of cell layers. ACS Synth Biol (2013) 0.90
Optimization of trans-splicing ribozyme efficiency and specificity by in vivo genetic selection. Nucleic Acids Res (2002) 0.87
A Role for KNAT Class II Genes in Root Development. Plant Signal Behav (2007) 0.83
A computational method for automated characterization of genetic components. ACS Synth Biol (2014) 0.81
Synthetic Biology: opportunities for Chilean bioindustry and education. Biol Res (2013) 0.77