Published in Anal Chem on October 16, 2007
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Absolute quantification of microbial proteomes at different states by directed mass spectrometry. Mol Syst Biol (2011) 1.46
Quantitative proteomic analyses of influenza virus-infected cultured human lung cells. J Virol (2010) 1.27
MaRiMba: a software application for spectral library-based MRM transition list assembly. J Proteome Res (2009) 0.99
Using PeptideAtlas, SRMAtlas, and PASSEL: Comprehensive Resources for Discovery and Targeted Proteomics. Curr Protoc Bioinformatics (2014) 0.96
Non-Biased Enrichment Does Not Improve Quantitative Proteomic Delineation of Reovirus T3D-Infected HeLa Cell Protein Alterations. Front Microbiol (2012) 0.91
The effects of infliximab therapy on the serum proteome of rheumatoid arthritis patients. Arthritis Res Ther (2009) 0.90
Response of primary human airway epithelial cells to influenza infection: a quantitative proteomic study. J Proteome Res (2012) 0.89
On the accuracy and limits of peptide fragmentation spectrum prediction. Anal Chem (2010) 0.83
Angiotensin I-converting enzyme (ACE) inhibitory activity and ACE inhibitory peptides of salmon (Salmo salar) protein hydrolysates obtained by human and porcine gastrointestinal enzymes. Int J Mol Sci (2014) 0.82
Alkylating tryptic peptides to enhance electrospray ionization mass spectrometry analysis. Anal Chem (2010) 0.79
Analysis of RP-HPLC loading conditions for maximizing peptide identifications in shotgun proteomics. J Proteome Res (2009) 0.79
HeLa cell response proteome alterations induced by mammalian reovirus T3D infection. Virol J (2013) 0.76
The Use of Peptide Markers of Carp and Herring Allergens as an Example of Detection of Sequenced and Non-Sequenced Proteins. Food Technol Biotechnol (2016) 0.75
A critical role for peptidoglycan N-deacetylation in Listeria evasion from the host innate immune system. Proc Natl Acad Sci U S A (2007) 2.46
In vivo transcriptional profiling of Listeria monocytogenes and mutagenesis identify new virulence factors involved in infection. PLoS Pathog (2009) 1.83
Lectin affinity as an approach to the proteomic analysis of membrane glycoproteins. J Proteome Res (2004) 1.68
Gp96 is a receptor for a novel Listeria monocytogenes virulence factor, Vip, a surface protein. EMBO J (2005) 1.49
Mass spectrometric characterization of proteins from the SARS virus: a preliminary report. Mol Cell Proteomics (2003) 1.49
Proteomic-based identification of cleaved urinary beta2-microglobulin as a potential marker for acute tubular injury in renal allografts. Am J Transplant (2005) 1.39
The arsenal of virulence factors deployed by Listeria monocytogenes to promote its cell infection cycle. Virulence (2011) 1.33
A selenoprotein in the plant kingdom. Mass spectrometry confirms that an opal codon (UGA) encodes selenocysteine in Chlamydomonas reinhardtii gluththione peroxidase. J Biol Chem (2002) 1.30
Function in Escherichia coli of the non-catalytic part of RNase E: role in the degradation of ribosome-free mRNA. Mol Microbiol (2002) 1.30
Rab5 mediates caspase-8-promoted cell motility and metastasis. Mol Biol Cell (2009) 1.28
Requirement of podocalyxin in TGF-beta induced epithelial mesenchymal transition. PLoS One (2011) 1.25
Practical implementation of 2D HPLC scheme with accurate peptide retention prediction in both dimensions for high-throughput bottom-up proteomics. Anal Chem (2008) 1.24
The role of angiotensin converting enzyme 2 in the generation of angiotensin 1-7 by rat proximal tubules. Am J Physiol Renal Physiol (2004) 1.24
Proteomic analysis of Clostridium thermocellum core metabolism: relative protein expression profiles and growth phase-dependent changes in protein expression. BMC Microbiol (2012) 1.21
Application of the StrOligo algorithm for the automated structure assignment of complex N-linked glycans from glycoproteins using tandem mass spectrometry. Rapid Commun Mass Spectrom (2003) 1.17
Exploitation of host cell cytoskeleton and signalling during Listeria monocytogenes entry into mammalian cells. C R Biol (2004) 1.15
Exploitation of host cell cytoskeleton and signalling during Listeria monocytogenes entry into mammalian cells. C R Biol (2004) 1.15
Deamidation of -Asn-Gly- sequences during sample preparation for proteomics: Consequences for MALDI and HPLC-MALDI analysis. Anal Chem (2006) 1.12
Investigating the role of P311 in the hypertrophic scar. PLoS One (2010) 1.10
The effect of laser profile, fluence, and spot size on sensitivity in orthogonal-injection matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Rapid Commun Mass Spectrom (2008) 1.09
CD40 ligand binds to alpha5beta1 integrin and triggers cell signaling. J Biol Chem (2006) 1.08
Detection of subclinical tubular injury after renal transplantation: comparison of urine protein analysis with allograft histopathology. Transplantation (2007) 1.07
Use of peptide retention time prediction for protein identification by off-line reversed-phase HPLC-MALDI MS/MS. Anal Chem (2006) 1.07
Biochemical and proteomics approaches to characterize topoisomerase IIalpha cysteines and DNA as targets responsible for cisplatin-induced inhibition of topoisomerase IIalpha. Mol Pharmacol (2004) 1.07
Automated structural assignment of derivatized complex N-linked oligosaccharides from tandem mass spectra. Rapid Commun Mass Spectrom (2002) 1.02
Citrus chlorophyllase dynamics at ethylene-induced fruit color-break: a study of chlorophyllase expression, posttranslational processing kinetics, and in situ intracellular localization. Plant Physiol (2008) 1.02
Influenza virus induces apoptosis via BAD-mediated mitochondrial dysregulation. J Virol (2012) 1.01
LapB, a novel Listeria monocytogenes LPXTG surface adhesin, required for entry into eukaryotic cells and virulence. J Infect Dis (2010) 0.98
Anti-Sa antibodies: prognostic and pathogenetic significance to rheumatoid arthritis. Arthritis Res Ther (2004) 0.98
Posttranslational modifications in lens fiber connexins identified by off-line-HPLC MALDI-quadrupole time-of-flight mass spectrometry. Invest Ophthalmol Vis Sci (2008) 0.98
V490M, a common mutation in 3-phosphoglycerate dehydrogenase deficiency, causes enzyme deficiency by decreasing the yield of mature enzyme. J Biol Chem (2001) 0.98
Analysis of the wheat and Puccinia triticina (leaf rust) proteomes during a susceptible host-pathogen interaction. Proteomics (2006) 0.96
The synovial proteome: analysis of fibroblast-like synoviocytes. Arthritis Res Ther (2004) 0.94
Assessment of the reproducibility of random hexapeptide peptide library-based protein normalization. J Proteome Res (2010) 0.93
Characterization of wheat gluten proteins by HPLC and MALDI TOF mass spectrometry. J Am Soc Mass Spectrom (2008) 0.93
IQGAP1 involvement in MTOC and granule polarization in NK-cell cytotoxicity. Eur J Immunol (2011) 0.91
Dihydrolipoamide dehydrogenase from porcine heart catalyzes NADH-dependent scavenging of nitric oxide. FEBS Lett (2004) 0.90
The effects of infliximab therapy on the serum proteome of rheumatoid arthritis patients. Arthritis Res Ther (2009) 0.90
Compositional characterization of the cytoskeleton of NK-like cells. J Proteome Res (2005) 0.89
A proteomics-based approach for monoclonal antibody characterization. Anal Biochem (2003) 0.88
Determination and characterization of site-specific N-glycosylation using MALDI-Qq-TOF tandem mass spectrometry: case study with a plant protease. Anal Chem (2006) 0.88
Mass spectrometric based mapping of the disulfide bonding patterns of integrin alpha chains. Biochemistry (2003) 0.88
Effect of cyclization of N-terminal glutamine and carbamidomethyl-cysteine (residues) on the chromatographic behavior of peptides in reversed-phase chromatography. J Chromatogr A (2011) 0.87
Proteomics of specific treatment-related alterations in Fabry disease: a strategy to identify biological abnormalities. Proc Natl Acad Sci U S A (2007) 0.87
Digestion pattern of reovirus outer capsid protein sigma3 determined by mass spectrometry. Virology (2003) 0.86
Granzyme B inhibits vaccinia virus production through proteolytic cleavage of eukaryotic initiation factor 4 gamma 3. PLoS Pathog (2011) 0.86
Information-dependent LC-MS/MS acquisition with exclusion lists potentially generated on-the-fly: case study using a whole cell digest of Clostridium thermocellum. Proteomics (2012) 0.86
Whole cell, label free protein quantitation with data independent acquisition: quantitation at the MS2 level. Proteomics (2014) 0.85
A study of immunoglobulin G glycosylation in monoclonal and polyclonal species by electrospray and matrix-assisted laser desorption/ionization mass spectrometry. Anal Biochem (2002) 0.85
Insights into electron flux through manipulation of fermentation conditions and assessment of protein expression profiles in Clostridium thermocellum. Appl Microbiol Biotechnol (2014) 0.84
Genomic evaluation of Thermoanaerobacter spp. for the construction of designer co-cultures to improve lignocellulosic biofuel production. PLoS One (2013) 0.84
Association of rasGAPSH3 binding protein 1, G3BP1, and rasGap120 with integrin containing complexes induced by an adhesion blocking antibody. J Proteome Res (2004) 0.84
Defining the membrane proteome of NK cells. J Mass Spectrom (2010) 0.83
Characterization of the catalase-peroxidase KatG from Burkholderia pseudomallei by mass spectrometry. J Biol Chem (2003) 0.83
Characterization of the murine hyaluronidase gene region reveals complex organization and cotranscription of Hyal1 with downstream genes, Fus2 and Hyal3. J Biol Chem (2002) 0.83
Thermoanaerobacter thermohydrosulfuricus WC1 shows protein complement stability during fermentation of key lignocellulose-derived substrates. Appl Environ Microbiol (2013) 0.83
Functional interaction of CD154 protein with α5β1 integrin is totally independent from its binding to αIIbβ3 integrin and CD40 molecules. J Biol Chem (2012) 0.83
Evidence for the presence of a low-mass beta1 integrin on the cell surface. J Cell Sci (2005) 0.83
Characterization of IQGAP1-containing complexes in NK-like cells: evidence for Rac 2 and RACK1 association during homotypic adhesion. J Proteome Res (2007) 0.82
Characterization of the agent of "high plains disease": mass spectrometry determines the sequence of the disease-specific protein. J Biol Chem (2003) 0.82
Glia maturation factor gamma regulates the migration and adherence of human T lymphocytes. BMC Immunol (2012) 0.82
Method for estimating the isotopic distributions of metabolically labeled proteins by MALDI-TOFMS: application to NMR samples. Anal Chem (2006) 0.82
The identification and characterization of membranome components. J Proteome Res (2008) 0.82
Characterizing degradation products of peptides containing N-terminal Cys residues by (off-line high-performance liquid chromatography)/matrix-assisted laser desorption/ionization quadrupole time-of-flight measurements. Rapid Commun Mass Spectrom (2003) 0.82
Proteomic characterization of serine hydrolase activity and composition in normal urine. Clin Proteomics (2013) 0.81