Genomic selection.

Genomic selection: prediction of accuracy and maximisation of long term response. Genetica (2008) 8.15

Mapping genes for complex traits in domestic animals and their use in breeding programmes. Nat Rev Genet (2009) 7.25

Rare and common variants: twenty arguments. Nat Rev Genet (2012) 6.67

Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers. Genetics (2010) 4.95

Reconciling the analysis of IBD and IBS in complex trait studies. Nat Rev Genet (2010) 3.62

Genomic-Enabled Prediction Based on Molecular Markers and Pedigree Using the Bayesian Linear Regression Package in R. Plant Genome (2010) 2.56

Accuracy of breeding values of 'unrelated' individuals predicted by dense SNP genotyping. Genet Sel Evol (2009) 2.39

The accuracy of Genomic Selection in Norwegian red cattle assessed by cross-validation. Genetics (2009) 2.36

Best linear unbiased prediction of genomic breeding values using a trait-specific marker-derived relationship matrix. PLoS One (2010) 2.08

The importance of information on relatives for the prediction of genomic breeding values and the implications for the makeup of reference data sets in livestock breeding schemes. Genet Sel Evol (2012) 1.66

Genomic prediction in CIMMYT maize and wheat breeding programs. Heredity (Edinb) (2013) 1.59

Effectiveness of genomic prediction of maize hybrid performance in different breeding populations and environments. G3 (Bethesda) (2012) 1.57

MultiBLUP: improved SNP-based prediction for complex traits. Genome Res (2014) 1.53

A high-resolution linkage map for comparative genome analysis and QTL fine mapping in Asian seabass, Lates calcarifer. BMC Genomics (2011) 1.53

Estimation of linkage disequilibrium in four US pig breeds. BMC Genomics (2012) 1.50

Will genomic selection be a practical method for plant breeding? Ann Bot (2012) 1.34

Genomic selection for fruit quality traits in apple (Malus×domestica Borkh.). PLoS One (2012) 1.32

Genomic selection and complex trait prediction using a fast EM algorithm applied to genome-wide markers. BMC Bioinformatics (2010) 1.27

A comprehensive genetic approach for improving prediction of skin cancer risk in humans. Genetics (2012) 1.20

Usefulness of multiparental populations of maize (Zea mays L.) for genome-based prediction. Genetics (2014) 1.07

Genomic estimated breeding values using genomic relationship matrices in a cloned population of loblolly pine. G3 (Bethesda) (2013) 1.05

Comparison of statistical procedures for estimating polygenic effects using dense genome-wide marker data. BMC Proc (2009) 1.01

Challenges for effective marker-assisted selection in plants. Genetica (2008) 1.01

Comparison of Bayesian models to estimate direct genomic values in multi-breed commercial beef cattle. Genet Sel Evol (2015) 1.01

Long-term response to genomic selection: effects of estimation method and reference population structure for different genetic architectures. Genet Sel Evol (2012) 1.01

The genomic architecture and association genetics of adaptive characters using a candidate SNP approach in boreal black spruce. BMC Genomics (2013) 0.98

Genome-wide and local pattern of linkage disequilibrium and persistence of phase for 3 Danish pig breeds. BMC Genet (2013) 0.98

SNP discovery with EST and NextGen sequencing in switchgrass (Panicum virgatum L.). PLoS One (2012) 0.95

Accounting for genomic pre-selection in national BLUP evaluations in dairy cattle. Genet Sel Evol (2011) 0.94

A primer on high-throughput computing for genomic selection. Front Genet (2011) 0.94

Including non-additive genetic effects in Bayesian methods for the prediction of genetic values based on genome-wide markers. BMC Genet (2011) 0.92

Accuracy of Genome-Enabled Prediction in a Dairy Cattle Population using Different Cross-Validation Layouts. Front Genet (2012) 0.90

Response to genomic selection: the Bulmer effect and the potential of genomic selection when the number of phenotypic records is limiting. Genet Sel Evol (2012) 0.90

Pre-selection of markers for genomic selection. BMC Proc (2011) 0.90

Genome-wide association analysis reveals loci associated with resistance against Piscirickettsia salmonis in two Atlantic salmon (Salmo salar L.) chromosomes. BMC Genomics (2015) 0.89

Large-scale sequestration of atmospheric carbon via plant roots in natural and agricultural ecosystems: why and how. Philos Trans R Soc Lond B Biol Sci (2012) 0.89

Evaluation of approaches for estimating the accuracy of genomic prediction in plant breeding. BMC Genomics (2013) 0.88

Genome-wide prediction of three important traits in bread wheat. Mol Breed (2014) 0.87

Emerging paradigms in genomics-based crop improvement. ScientificWorldJournal (2013) 0.86

Genome-wide prediction methods in highly diverse and heterozygous species: proof-of-concept through simulation in grapevine. PLoS One (2014) 0.84

Exploiting genomic knowledge in optimising molecular breeding programmes: algorithms from evolutionary computing. PLoS One (2012) 0.84

Family-based genetic risk prediction of multifactorial disease. Genome Med (2010) 0.83

Linkage disequilibrium in crossbred and pure line chickens. Genet Sel Evol (2015) 0.82

The effect of using genealogy-based haplotypes for genomic prediction. Genet Sel Evol (2013) 0.81

SNPs in the bovine IL-10 receptor are associated with somatic cell score in Canadian dairy bulls. Mamm Genome (2009) 0.80

Genes contributing to genetic variation of muscling in sheep. Front Genet (2012) 0.80

Multi-Trait GWAS and New Candidate Genes Annotation for Growth Curve Parameters in Brahman Cattle. PLoS One (2015) 0.80

Comparison of Genomic Selection Models to Predict Flowering Time and Spike Grain Number in Two Hexaploid Wheat Doubled Haploid Populations. G3 (Bethesda) (2015) 0.79

Performance of genomic prediction within and across generations in maritime pine. BMC Genomics (2016) 0.79

A Ranking Approach to Genomic Selection. PLoS One (2015) 0.78

Artificial selection with traditional or genomic relationships: consequences in coancestry and genetic diversity. Front Genet (2015) 0.78

Assessment of whole-genome regression for type II diabetes. PLoS One (2015) 0.78

Go with the flow-biology and genetics of the lactation cycle. Front Genet (2015) 0.78

Extent of Linkage Disequilibrium and Effective Population Size in Four South African Sanga Cattle Breeds. Front Genet (2015) 0.78

Genomic prediction of biological shape: elliptic Fourier analysis and kernel partial least squares (PLS) regression applied to grain shape prediction in rice (Oryza sativa L.). PLoS One (2015) 0.78

The Importance of Endophenotypes to Evaluate the Relationship between Genotype and External Phenotype. Int J Mol Sci (2017) 0.77

Comparative analysis of the GBLUP, emBayesB, and GWAS algorithms to predict genetic values in large yellow croaker (Larimichthys crocea). BMC Genomics (2016) 0.77

RNA-Seq using two populations reveals genes and alleles controlling wood traits and growth in Eucalyptus nitens. PLoS One (2014) 0.77

Ridge, Lasso and Bayesian additive-dominance genomic models. BMC Genet (2015) 0.77

Population structure and history of the Welsh sheep breeds determined by whole genome genotyping. BMC Genet (2015) 0.77

Influence of outliers on accuracy estimation in genomic prediction in plant breeding. G3 (Bethesda) (2014) 0.77

Breeding Value of Primary Synthetic Wheat Genotypes for Grain Yield. PLoS One (2016) 0.77

Optimizing Training Population Data and Validation of Genomic Selection for Economic Traits in Soft Winter Wheat. G3 (Bethesda) (2016) 0.76

Genomic prediction and genome-wide association study for dagginess and host internal parasite resistance in New Zealand sheep. BMC Genomics (2015) 0.76

Accuracies of genomically estimated breeding values from pure-breed and across-breed predictions in Australian beef cattle. Genet Sel Evol (2014) 0.76

Effect of genotype imputation on genome-enabled prediction of complex traits: an empirical study with mice data. BMC Genet (2014) 0.75

solGS: a web-based tool for genomic selection. BMC Bioinformatics (2014) 0.75

Grand challenge in livestock genomics: for food, for medicine, for the environment, for knowledge. Front Genet (2011) 0.75

Genomic Selection in the Era of Next Generation Sequencing for Complex Traits in Plant Breeding. Front Genet (2016) 0.75

Breeding Jatropha curcas by genomic selection: A pilot assessment of the accuracy of predictive models. PLoS One (2017) 0.75

Meta-analysis of genome-wide association from genomic prediction models. Anim Genet (2015) 0.75

Identification of Genetic Associations and Functional Polymorphisms of SAA1 Gene Affecting Milk Production Traits in Dairy Cattle. PLoS One (2016) 0.75

Genomic prediction from observed and imputed high-density ovine genotypes. Genet Sel Evol (2017) 0.75

Predicted Residual Error Sum of Squares of Mixed Models - An Application to Genomic Prediction. G3 (Bethesda) (2017) 0.75

Genetic Nature of Elemental Contents in Wheat Grains and Its Genomic Prediction: Toward the Effective Use of Wheat Landraces from Afghanistan. PLoS One (2017) 0.75

The Prediction of the Expected Current Selection Coefficient of Single Nucleotide Polymorphism Associated with Holstein Milk Yield, Fat and Protein Contents. Asian-Australas J Anim Sci (2016) 0.75

Integrating milk metabolite profile information for the prediction of traditional milk traits based on SNP information for Holstein cows. PLoS One (2013) 0.75

Effects of marker density and population structure on the genomic prediction accuracy for growth trait in Pacific white shrimp Litopenaeus vannamei. BMC Genet (2017) 0.75

An Upper Bound for Accuracy of Prediction Using GBLUP. PLoS One (2016) 0.75

Genomic predictions can accelerate selection for resistance against Piscirickettsia salmonis in Atlantic salmon (Salmo salar). BMC Genomics (2017) 0.75

Genomic Tools in Pearl Millet Breeding for Drought Tolerance: Status and Prospects. Front Plant Sci (2016) 0.75

Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing. Theor Appl Genet (2017) 0.75

Genomic Selection Using Extreme Phenotypes and Pre-Selection of SNPs in Large Yellow Croaker (Larimichthys crocea). Mar Biotechnol (NY) (2016) 0.75

Leveraging genomic prediction to scan germplasm collection for crop improvement. PLoS One (2017) 0.75

Genome Wide Association Study to Identify the Genetic Base of Smallholder Farmer Preferences of Durum Wheat Traits. Front Plant Sci (2017) 0.75

Prediction of total genetic value using genome-wide dense marker maps. Genetics (2001) 41.25

Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus cattle. Genetics (2008) 4.20

Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels. J Dairy Sci (2012) 3.07

Reliability of genomic predictions across multiple populations. Genetics (2009) 2.46

Using the genomic relationship matrix to predict the accuracy of genomic selection. J Anim Breed Genet (2011) 2.23

A validated genome-wide association study in 2 dairy cattle breeds for milk production and fertility traits using variable length haplotypes. J Dairy Sci (2010) 1.66

Occurrence of infected amoebae in cooling towers compared with natural aquatic environments: implications for emerging pathogens. Environ Sci Technol (2006) 1.51

Accuracy of prediction of genomic breeding values for residual feed intake and carcass and meat quality traits in Bos taurus, Bos indicus, and composite beef cattle. J Anim Sci (2013) 1.47

Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions. Heredity (Edinb) (2013) 1.43

Genome-wide association studies for feedlot and growth traits in cattle. J Anim Sci (2011) 1.33

Components of the accuracy of genomic prediction in a multi-breed sheep population. J Anim Sci (2012) 1.30

Short communication: Genomic selection using a multi-breed, across-country reference population. J Dairy Sci (2011) 1.26

Genome-wide association mapping in Norwegian Red cattle identifies quantitative trait loci for fertility and milk production on BTA12. Anim Genet (2011) 1.22

Comparison of heritabilities of dairy traits in Australian Holstein-Friesian cattle from genomic and pedigree data and implications for genomic evaluations. J Anim Breed Genet (2013) 1.16

Multivariate analysis of a genome-wide association study in dairy cattle. J Dairy Sci (2010) 1.15

Accuracy of genomic predictions of residual feed intake and 250-day body weight in growing heifers using 625,000 single nucleotide polymorphism markers. J Dairy Sci (2012) 1.12

Novel strategies to minimize progeny inbreeding while maximizing genetic gain using genomic information. J Dairy Sci (2012) 1.08

A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattle. Anim Genet (2009) 1.02

Power of a genome scan to detect and locate quantitative trait loci in cattle using dense single nucleotide polymorphisms. J Anim Breed Genet (2010) 1.01

Validation of single nucleotide polymorphisms associated with milk production traits in dairy cattle. J Dairy Sci (2012) 0.99

Long-term selection strategies for complex traits using high-density genetic markers. J Dairy Sci (2012) 0.98

Deterministic models of breeding scheme designs that incorporate genomic selection. J Dairy Sci (2010) 0.95

A novel predictor of multilocus haplotype homozygosity: comparison with existing predictors. Genet Res (Camb) (2009) 0.95

Detection of chromosome segments of zebu and taurine origin and their effect on beef production and growth. J Anim Sci (2011) 0.94

Investigating the effect of two methane-mitigating diets on the rumen microbiome using massively parallel sequencing. J Dairy Sci (2013) 0.93

Quantitative trait loci for clinical mastitis on chromosomes 2, 6, 14 and 20 in Norwegian Red cattle. Anim Genet (2011) 0.93

A single nucleotide polymorphism on chromosome 10 is highly predictive for the polled phenotype in Australian Merino sheep. Anim Genet (2011) 0.92

Improved accuracy of genomic prediction for dry matter intake of dairy cattle from combined European and Australian data sets. J Dairy Sci (2012) 0.83

Gene by environment interactions for production traits in Australian dairy cattle. J Dairy Sci (2009) 0.83

How old are quantitative trait loci and how widely do they segregate? J Anim Breed Genet (2015) 0.82

Variation in residual feed intake in Holstein-Friesian dairy heifers in southern Australia. J Dairy Sci (2011) 0.81

Generalization of treatment effects in training public speakers. Behav Res Ther (1984) 0.80

Genetic markers for lactation persistency in primiparous Australian dairy cows. J Dairy Sci (2010) 0.80

Obstructive, mixed, and central apnea in the neonate: physiologic correlates. J Pediatr (1992) 0.79

Comparison of casein haplotypes between two geographically distant European dairy goat breeds. J Anim Breed Genet (2008) 0.78

Use of a microsatellite-based pedigree in estimation of heritabilities for economic traits in Australian blue mussel, Mytilus galloprovincialis. J Anim Breed Genet (2011) 0.76

Corrigendum: Genomic Selection Improves Heat Tolerance in Dairy Cattle. Sci Rep (2017) 0.75

Genomic heritabilities and genomic estimated breeding values for methane traits in Angus cattle. J Anim Sci (2016) 0.75

Genomewide association study of methane emissions in Angus beef cattle with validation in dairy cattle. J Anim Sci (2016) 0.75