Published in J Proteome Res on January 12, 2008
Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. Plant Physiol (2008) 1.48
Defining the protein complex proteome of plant mitochondria. Plant Physiol (2011) 1.40
Internal architecture of mitochondrial complex I from Arabidopsis thaliana. Plant Cell (2010) 1.24
Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis. Plant Physiol (2011) 1.11
Mitochondrial biogenesis and function in Arabidopsis. Arabidopsis Book (2008) 1.06
Insights into the composition and assembly of the membrane arm of plant complex I through analysis of subcomplexes in Arabidopsis mutant lines. J Biol Chem (2011) 1.01
A transcriptomic network underlies microstructural and physiological responses to cadmium in Populus x canescens. Plant Physiol (2013) 0.99
Eukaryotic complex I: functional diversity and experimental systems to unravel the assembly process. Mol Genet Genomics (2008) 0.97
Dual location of the mitochondrial preprotein transporters B14.7 and Tim23-2 in complex I and the TIM17:23 complex in Arabidopsis links mitochondrial activity and biogenesis. Plant Cell (2012) 0.97
Conserved and novel functions for Arabidopsis thaliana MIA40 in assembly of proteins in mitochondria and peroxisomes. J Biol Chem (2010) 0.93
Deficient plastidic fatty acid synthesis triggers cell death by modulating mitochondrial reactive oxygen species. Cell Res (2015) 0.92
Rice DB: an Oryza Information Portal linking annotation, subcellular location, function, expression, regulation, and evolutionary information for rice and Arabidopsis. Plant J (2013) 0.90
Biochemistry, proteomics, and phosphoproteomics of plant mitochondria from non-photosynthetic cells. Front Plant Sci (2013) 0.87
Fluorescent protein tagging as a tool to define the subcellular distribution of proteins in plants. Front Plant Sci (2013) 0.85
Subcomplexes of ancestral respiratory complex I subunits rapidly turn over in vivo as productive assembly intermediates in Arabidopsis. J Biol Chem (2012) 0.85
Proteomic investigations of complex I composition: how to define a subunit? Front Plant Sci (2012) 0.85
The temporal foliar transcriptome of the perennial C3 desert plant Rhazya stricta in its natural environment. BMC Plant Biol (2014) 0.80
3D Gel Map of Arabidopsis Complex I. Front Plant Sci (2013) 0.78
A molecular link between mitochondrial preprotein transporters and respiratory chain complexes. Plant Signal Behav (2012) 0.77
AtFtsH4 perturbs the mitochondrial respiratory chain complexes and auxin homeostasis in Arabidopsis. Plant Signal Behav (2014) 0.75
The Permeability Transition in Plant Mitochondria: The Missing Link. Front Plant Sci (2015) 0.75
The Mitochondrial Complexome of Medicago truncatula. Front Plant Sci (2013) 0.75
Human DNA methylomes at base resolution show widespread epigenomic differences. Nature (2009) 34.27
Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell (2008) 32.65
SUBA: the Arabidopsis Subcellular Database. Nucleic Acids Res (2006) 3.63
A link between RNA metabolism and silencing affecting Arabidopsis development. Dev Cell (2008) 3.39
Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana. Plant Cell (2007) 2.51
A predicted interactome for Arabidopsis. Plant Physiol (2007) 2.41
Molecular definition of the ascorbate-glutathione cycle in Arabidopsis mitochondria reveals dual targeting of antioxidant defenses in plants. J Biol Chem (2003) 1.96
Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells. Plant Cell (2003) 1.80
The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana. Plant Cell (2007) 1.75
The absence of ALTERNATIVE OXIDASE1a in Arabidopsis results in acute sensitivity to combined light and drought stress. Plant Physiol (2008) 1.73
Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. Plant Physiol (2005) 1.68
MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data. Plant Physiol (2010) 1.59
Remodeled respiration in ndufs4 with low phosphorylation efficiency suppresses Arabidopsis germination and growth and alters control of metabolism at night. Plant Physiol (2009) 1.53
Alternative oxidases in Arabidopsis: a comparative analysis of differential expression in the gene family provides new insights into function of non-phosphorylating bypasses. Biochim Biophys Acta (2006) 1.49
Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. Plant Physiol (2008) 1.48
TCP transcription factors link the regulation of genes encoding mitochondrial proteins with the circadian clock in Arabidopsis thaliana. Plant Cell (2010) 1.47
Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Mol Cell Proteomics (2007) 1.45
Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination process. Plant Physiol (2008) 1.45
Mitochondrial complex I from Arabidopsis and rice: orthologs of mammalian and fungal components coupled with plant-specific subunits. Biochim Biophys Acta (2003) 1.42
Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana. Plant Mol Biol (2005) 1.41
Differential response of gray poplar leaves and roots underpins stress adaptation during hypoxia. Plant Physiol (2008) 1.39
Mitochondrial uncoupling protein is required for efficient photosynthesis. Proc Natl Acad Sci U S A (2006) 1.35
Salicylic acid is an uncoupler and inhibitor of mitochondrial electron transport. Plant Physiol (2003) 1.30
The seminal fluid proteome of the honeybee Apis mellifera. Proteomics (2009) 1.29
A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. Plant Physiol (2004) 1.27
Environmental stress causes oxidative damage to plant mitochondria leading to inhibition of glycine decarboxylase. J Biol Chem (2002) 1.26
Differential impact of environmental stresses on the pea mitochondrial proteome. Mol Cell Proteomics (2005) 1.25
The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana. Plant J (2008) 1.24
Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Mol Cell Proteomics (2008) 1.23
Defining core metabolic and transcriptomic responses to oxygen availability in rice embryos and young seedlings. Plant Physiol (2009) 1.23
Does anoxia tolerance involve altering the energy currency towards PPi? Trends Plant Sci (2008) 1.23
Towards an analysis of the rice mitochondrial proteome. Plant Physiol (2003) 1.22
Effects of water stress on respiration in soybean leaves. Plant Physiol (2005) 1.20
Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res (2011) 1.20
Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis. Plant Physiol (2008) 1.20
Experimental analysis of the rice mitochondrial proteome, its biogenesis, and heterogeneity. Plant Physiol (2008) 1.20
Mitochondrial malate dehydrogenase lowers leaf respiration and alters photorespiration and plant growth in Arabidopsis. Plant Physiol (2010) 1.20
Ordered assembly of mitochondria during rice germination begins with pro-mitochondrial structures rich in components of the protein import apparatus. Plant Mol Biol (2006) 1.16
Refining the definition of plant mitochondrial presequences through analysis of sorting signals, N-terminal modifications, and cleavage motifs. Plant Physiol (2009) 1.15
Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis. Plant Physiol (2004) 1.13
Mitochondrial complex II has a key role in mitochondrial-derived reactive oxygen species influence on plant stress gene regulation and defense. Proc Natl Acad Sci U S A (2011) 1.13
Insights into female sperm storage from the spermathecal fluid proteome of the honeybee Apis mellifera. Genome Biol (2009) 1.12
Blue-native PAGE in plants: a tool in analysis of protein-protein interactions. Plant Methods (2005) 1.12
Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis. Plant Physiol (2011) 1.11
Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana. FEBS Lett (2008) 1.11
Phage-type RNA polymerase RPOTmp performs gene-specific transcription in mitochondria of Arabidopsis thaliana. Plant Cell (2009) 1.10
Molecular distinction between alternative oxidase from monocots and dicots. Plant Physiol (2002) 1.10
A plant outer mitochondrial membrane protein with high amino acid sequence identity to a chloroplast protein import receptor. FEBS Lett (2004) 1.10
The Arabidopsis thaliana 2-D gel mitochondrial proteome: Refining the value of reference maps for assessing protein abundance, contaminants and post-translational modifications. Proteomics (2011) 1.09
Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. Plant Physiol (2009) 1.09
Free-flow electrophoresis for purification of plant mitochondria by surface charge. Plant J (2007) 1.08
Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. Plant Mol Biol (2006) 1.08
Mitochondrial biogenesis and function in Arabidopsis. Arabidopsis Book (2008) 1.06
Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNAArg(ACG) and is essential for efficient chloroplast translation. Plant Cell (2009) 1.06
Oxygen initiation of respiration and mitochondrial biogenesis in rice. J Biol Chem (2007) 1.06
Isolation of intact, functional mitochondria from the model plant Arabidopsis thaliana. Methods Mol Biol (2007) 1.05
Nucleotide and RNA metabolism prime translational initiation in the earliest events of mitochondrial biogenesis during Arabidopsis germination. Plant Physiol (2012) 1.05
Developmental physiology of cluster-root carboxylate synthesis and exudation in harsh hakea. Expression of phosphoenolpyruvate carboxylase and the alternative oxidase. Plant Physiol (2004) 1.03
Differential molecular responses of rice and wheat coleoptiles to anoxia reveal novel metabolic adaptations in amino acid metabolism for tissue tolerance. Plant Physiol (2011) 1.01
Insights into the composition and assembly of the membrane arm of plant complex I through analysis of subcomplexes in Arabidopsis mutant lines. J Biol Chem (2011) 1.01
Gene transfer from mitochondrion to nucleus: novel mechanisms for gene activation from Cox2. Plant J (2002) 1.01
Cyclotides associate with leaf vasculature and are the products of a novel precursor in petunia (Solanaceae). J Biol Chem (2012) 1.00
The role of mitochondrial respiration in salinity tolerance. Trends Plant Sci (2011) 1.00
Proteomic analysis of glutathione S -transferases of Arabidopsis thaliana reveals differential salicylic acid-induced expression of the plant-specific phi and tau classes. Plant Mol Biol (2004) 0.99
A survey of the Arabidopsis thaliana mitochondrial phosphoproteome. Proteomics (2009) 0.99
Maintenance of growth rate at low temperature in rice and wheat cultivars with a high degree of respiratory homeostasis is associated with a high efficiency of respiratory ATP production. Plant Cell Physiol (2004) 0.98
Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphate interactions within the matrix. J Proteome Res (2006) 0.97
AMPDB: the Arabidopsis Mitochondrial Protein Database. Nucleic Acids Res (2005) 0.97
The biological roles of glutaredoxins. Biochem J (2012) 0.96
A signaling-regulated, short-chain dehydrogenase of Stagonospora nodorum regulates asexual development. Eukaryot Cell (2008) 0.96
Analysis of the rice mitochondrial carrier family reveals anaerobic accumulation of a basic amino acid carrier involved in arginine metabolism during seed germination. Plant Physiol (2010) 0.96
Zinc-dependent intermembrane space proteins stimulate import of carrier proteins into plant mitochondria. Plant J (2002) 0.96
Abiotic environmental stress induced changes in the Arabidopsis thaliana chloroplast, mitochondria and peroxisome proteomes. J Proteomics (2008) 0.96
Mitochondrial composition, function and stress response in plants. J Integr Plant Biol (2012) 0.95
A tomato alternative oxidase protein with altered regulatory properties. Biochim Biophys Acta (2003) 0.93
Succinate dehydrogenase assembly factor 2 is needed for assembly and activity of mitochondrial complex II and for normal root elongation in Arabidopsis. Plant J (2012) 0.93
Determining degradation and synthesis rates of arabidopsis proteins using the kinetics of progressive 15N labeling of two-dimensional gel-separated protein spots. Mol Cell Proteomics (2012) 0.93
What makes a mitochondrion? Genome Biol (2003) 0.92
Protein synthesis by rice coleoptiles during prolonged anoxia: implications for glycolysis, growth and energy utilization. Ann Bot (2005) 0.92
Mitochondrial acyl carrier proteins in Arabidopsis thaliana are predominantly soluble matrix proteins and none can be confirmed as subunits of respiratory Complex I. Plant Mol Biol (2007) 0.92
Environmental stresses inhibit and stimulate different protein import pathways in plant mitochondria. FEBS Lett (2003) 0.91
Diurnal changes in mitochondrial function reveal daily optimization of light and dark respiratory metabolism in Arabidopsis. Mol Cell Proteomics (2010) 0.90
Targets of stress-induced oxidative damage in plant mitochondria and their impact on cell carbon/nitrogen metabolism. J Exp Bot (2003) 0.90