Published in Plant Physiol on September 27, 2010
Single cystathionine β-synthase domain-containing proteins modulate development by regulating the thioredoxin system in Arabidopsis. Plant Cell (2011) 1.12
Characterization of a NADH-dependent glutamate dehydrogenase mutant of Arabidopsis demonstrates the key role of this enzyme in root carbon and nitrogen metabolism. Plant Cell (2012) 0.99
Multiple strategies to prevent oxidative stress in Arabidopsis plants lacking the malate valve enzyme NADP-malate dehydrogenase. J Exp Bot (2011) 0.96
Plant D-2-hydroxyglutarate dehydrogenase participates in the catabolism of lysine especially during senescence. J Biol Chem (2011) 0.91
Sulphur limitation provokes physiological and leaf proteome changes in oilseed rape that lead to perturbation of sulphur, carbon and oxidative metabolisms. BMC Plant Biol (2013) 0.91
Resolving the compartmentation and function of C4 photosynthesis in the single-cell C4 species Bienertia sinuspersici. Plant Physiol (2011) 0.90
Searching for resistance genes to Bursaphelenchus xylophilus using high throughput screening. BMC Genomics (2012) 0.88
Redox- and Reactive Oxygen Species-Dependent Signaling into and out of the Photosynthesizing Chloroplast. Plant Physiol (2016) 0.88
Plastidial NAD-dependent malate dehydrogenase is critical for embryo development and heterotrophic metabolism in Arabidopsis. Plant Physiol (2014) 0.87
Respiratory electron transfer pathways in plant mitochondria. Front Plant Sci (2014) 0.86
Selected reaction monitoring to determine protein abundance in Arabidopsis using the Arabidopsis proteotypic predictor. Plant Physiol (2013) 0.85
Analysis of differential expression patterns of mRNA and protein during cold-acclimation and de-acclimation in Arabidopsis. Mol Cell Proteomics (2014) 0.82
An engineered pathway for glyoxylate metabolism in tobacco plants aimed to avoid the release of ammonia in photorespiration. BMC Biotechnol (2011) 0.82
Permeability of the peroxisomal membrane: lessons from the glyoxylate cycle. Front Physiol (2013) 0.82
Recent advances in the composition and heterogeneity of the Arabidopsis mitochondrial proteome. Front Plant Sci (2013) 0.81
Metabolic control of redox and redox control of metabolism in plants. Antioxid Redox Signal (2014) 0.80
Evolution and functional implications of the tricarboxylic acid cycle as revealed by phylogenetic analysis. Genome Biol Evol (2014) 0.80
2-Hydroxy Acids in Plant Metabolism. Arabidopsis Book (2015) 0.80
The inter-relationship of ascorbate transport, metabolism and mitochondrial, plastidic respiration. Antioxid Redox Signal (2013) 0.79
The mitochondrial malate dehydrogenase 1 gene GhmMDH1 is involved in plant and root growth under phosphorus deficiency conditions in cotton. Sci Rep (2015) 0.78
Decreasing the mitochondrial synthesis of malate in potato tubers does not affect plastidial starch synthesis, suggesting that the physiological regulation of ADPglucose pyrophosphorylase is context dependent. Plant Physiol (2012) 0.78
Overexpression of Mitochondrial Phosphate Transporter 3 Severely Hampers Plant Development through Regulating Mitochondrial Function in Arabidopsis. PLoS One (2015) 0.77
The anti-cancer property of proteins extracted from Gynura procumbens (Lour.) Merr. PLoS One (2013) 0.77
Comparative study of the protein profiles of Sunki mandarin and Rangpur lime plants in response to water deficit. BMC Plant Biol (2015) 0.77
Functional genomics tools applied to plant metabolism: a survey on plant respiration, its connections and the annotation of complex gene functions. Front Plant Sci (2012) 0.76
Reduced mitochondrial malate dehydrogenase activity has a strong effect on photorespiratory metabolism as revealed by 13C labelling. J Exp Bot (2016) 0.76
Loss of Mitochondrial Malate Dehydrogenase Activity Alters Seed Metabolism Impairing Seed Maturation and Post-Germination Growth in Arabidopsis. Plant Physiol (2016) 0.76
Ectopic Expression of the Chinese Cabbage Malate Dehydrogenase Gene Promotes Growth and Aluminum Resistance in Arabidopsis. Front Plant Sci (2016) 0.75
Proteomic Analysis of Responsive Proteins Induced in Japanese Birch Plantlet Treated with Salicylic Acid. Proteomes (2014) 0.75
Comparative Genome-Wide Analysis of the Malate Dehydrogenase Gene Families in Cotton. PLoS One (2016) 0.75
Photoperiod affects the phenotype of mitochondrial complex I mutants. Plant Physiol (2016) 0.75
Integrated physiological, proteomic and metabolomic analysis of UV stress responses and adaptation mechanisms in Pinus radiata. Mol Cell Proteomics (2017) 0.75
Transcriptome response signatures associated with the overexpression of a mitochondrial uncoupling protein (AtUCP1) in tobacco. PLoS One (2015) 0.75
The enhancement of tolerance to salt and cold stresses by modifying the redox state and salicylic acid content via the cytosolic malate dehydrogenase gene in transgenic apple plants. Plant Biotechnol J (2016) 0.75
Integrated analysis of 454 and Illumina transcriptomic sequencing characterizes carbon flux and energy source for fatty acid synthesis in developing Lindera glauca fruits for woody biodiesel. Biotechnol Biofuels (2017) 0.75
Cassava root membrane proteome reveals activities during storage root maturation. J Plant Res (2015) 0.75
Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science (2003) 39.19
Genevestigator v3: a reference expression database for the meta-analysis of transcriptomes. Adv Bioinformatics (2008) 8.36
An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics. Plant Mol Biol (2003) 6.57
Genetic control of mitochondrial malate dehydrogenases: evidence for duplicated chromosome segments. Proc Natl Acad Sci U S A (1977) 3.35
Rapid regulation of light harvesting and plant fitness in the field. Science (2002) 2.74
Chloroplastic photorespiratory bypass increases photosynthesis and biomass production in Arabidopsis thaliana. Nat Biotechnol (2007) 2.69
Oxalacetate control of Krebs cycle oxidations in purified plant mitochondria. Biochem Biophys Res Commun (1972) 2.64
Evidence for the Presence of the Ascorbate-Glutathione Cycle in Mitochondria and Peroxisomes of Pea Leaves. Plant Physiol (1997) 2.47
Fitting photosynthetic carbon dioxide response curves for C(3) leaves. Plant Cell Environ (2007) 2.47
Analysis of the Arabidopsis mitochondrial proteome. Plant Physiol (2001) 2.41
Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development. Plant Physiol (2003) 2.40
Role of Glutamate-oxaloacetate Transaminase and Malate Dehydrogenase in the Regeneration of NAD for Glycine Oxidation by Spinach leaf Mitochondria. Plant Physiol (1981) 2.12
The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Mol Cell Proteomics (2005) 2.01
Molecular definition of the ascorbate-glutathione cycle in Arabidopsis mitochondria reveals dual targeting of antioxidant defenses in plants. J Biol Chem (2003) 1.96
Ascorbate biosynthesis in mitochondria is linked to the electron transport chain between complexes III and IV. Plant Physiol (2000) 1.84
Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiol (2005) 1.75
The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets. BMC Bioinformatics (2010) 1.68
Malate dehydrogenase isoenzymes: cellular locations and role in the flow of metabolites between the cytoplasm and cell organelles. Biochim Biophys Acta (1992) 1.59
Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. Plant Physiol (2008) 1.48
Overexpression of malate dehydrogenase in transgenic alfalfa enhances organic acid synthesis and confers tolerance to aluminum. Plant Physiol (2001) 1.45
Control of ascorbate synthesis by respiration and its implications for stress responses. Plant Physiol (2003) 1.44
Comparison of Methods to Estimate Dark Respiration in the Light in Leaves of Two Woody Species. Plant Physiol (1994) 1.43
Regulation of NAD- and NADP-dependent isocitrate dehydrogenases by reduction levels of pyridine nucleotides in mitochondria and cytosol of pea leaves. Biochim Biophys Acta (2003) 1.42
The Arabidopsis glutathione transferase gene family displays complex stress regulation and co-silencing multiple genes results in altered metabolic sensitivity to oxidative stress. Plant J (2009) 1.35
Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination. Plant Cell (2005) 1.35
Ozone exposure decreases UVB sensitivity in a UVB-sensitive flavonoid mutant of Arabidopsis. Photochem Photobiol (1995) 1.26
Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Mol Cell Proteomics (2008) 1.23
A survey of the plant mitochondrial proteome in relation to development. Proteomics (2002) 1.21
Silencing of the mitochondrial ascorbate synthesizing enzyme L-galactono-1,4-lactone dehydrogenase affects plant and fruit development in tomato. Plant Physiol (2007) 1.21
L-galactono-1,4-lactone dehydrogenase is required for the accumulation of plant respiratory complex I. J Biol Chem (2008) 1.20
Biosynthesis of ascorbic acid in kidney bean. L-galactono-gamma-lactone dehydrogenase is an intrinsic protein located at the mitochondrial inner membrane Plant Physiol (1999) 1.19
Arabidopsis peroxisomal malate dehydrogenase functions in beta-oxidation but not in the glyoxylate cycle. Plant J (2007) 1.17
Decreased mitochondrial activities of malate dehydrogenase and fumarase in tomato lead to altered root growth and architecture via diverse mechanisms. Plant Physiol (2008) 1.10
Generation and properties of ascorbic acid-deficient transgenic tobacco cells expressing antisense RNA for L-galactono-1,4-lactone dehydrogenase. Plant J (2001) 1.08
Interaction between photorespiration and respiration in transgenic potato plants with antisense reduction in glycine decarboxylase. Planta (2005) 1.02
Peroxisomal malate dehydrogenase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release. Plant Physiol (2008) 1.01
A novel, non-redox-regulated NAD-dependent malate dehydrogenase from chloroplasts of Arabidopsis thaliana L. J Biol Chem (1998) 1.00
The enigmatic contribution of mitochondrial function in photosynthesis. J Exp Bot (2008) 0.98
Determination of the starch-phosphorylating enzyme activity in plant extracts. Planta (2002) 0.98
Abiotic environmental stress induced changes in the Arabidopsis thaliana chloroplast, mitochondria and peroxisome proteomes. J Proteomics (2008) 0.96
AMR1, an Arabidopsis gene that coordinately and negatively regulates the mannose/l-galactose ascorbic acid biosynthetic pathway. Plant Physiol (2009) 0.93
Galactonolactone dehydrogenase requires a redox-sensitive thiol for optimal production of vitamin C. Plant Physiol (2009) 0.88
Independent spontaneous mitochondrial malate dehydrogenase null mutants in soybean are the result of deletions. J Hered (2001) 0.80
Mitochondrial malate dehydrogenases in Brassica napus: altered protein patterns in different nuclear mitochondrial combinations. Plant Mol Biol (1997) 0.77
Human DNA methylomes at base resolution show widespread epigenomic differences. Nature (2009) 34.27
Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell (2008) 32.65
SUBA: the Arabidopsis Subcellular Database. Nucleic Acids Res (2006) 3.63
A link between RNA metabolism and silencing affecting Arabidopsis development. Dev Cell (2008) 3.39
The diurnal metabolism of leaf starch. Biochem J (2007) 2.69
Genome-wide analysis of mRNA decay rates and their determinants in Arabidopsis thaliana. Plant Cell (2007) 2.51
Starch degradation. Annu Rev Plant Biol (2005) 2.49
A predicted interactome for Arabidopsis. Plant Physiol (2007) 2.41
A cytosolic glucosyltransferase is required for conversion of starch to sucrose in Arabidopsis leaves at night. Plant J (2004) 2.22
Karrikins discovered in smoke trigger Arabidopsis seed germination by a mechanism requiring gibberellic acid synthesis and light. Plant Physiol (2008) 2.01
Molecular definition of the ascorbate-glutathione cycle in Arabidopsis mitochondria reveals dual targeting of antioxidant defenses in plants. J Biol Chem (2003) 1.96
Gene expression in autumn leaves. Plant Physiol (2003) 1.91
F-box protein MAX2 has dual roles in karrikin and strigolactone signaling in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2011) 1.89
Specialisation within the DWARF14 protein family confers distinct responses to karrikins and strigolactones in Arabidopsis. Development (2012) 1.83
Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells. Plant Cell (2003) 1.80
The pentatricopeptide repeat gene OTP43 is required for trans-splicing of the mitochondrial nad1 Intron 1 in Arabidopsis thaliana. Plant Cell (2007) 1.75
The absence of ALTERNATIVE OXIDASE1a in Arabidopsis results in acute sensitivity to combined light and drought stress. Plant Physiol (2008) 1.73
Beta-AMYLASE4, a noncatalytic protein required for starch breakdown, acts upstream of three active beta-amylases in Arabidopsis chloroplasts. Plant Cell (2008) 1.72
Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. Plant Physiol (2005) 1.68
A cellular timetable of autumn senescence. Plant Physiol (2005) 1.66
Recommendations for reporting metabolite data. Plant Cell (2011) 1.61
MASCP Gator: an aggregation portal for the visualization of Arabidopsis proteomics data. Plant Physiol (2010) 1.59
Chewing the fat: beta-oxidation in signalling and development. Trends Plant Sci (2006) 1.57
Plastidial alpha-glucan phosphorylase is not required for starch degradation in Arabidopsis leaves but has a role in the tolerance of abiotic stress. Plant Physiol (2004) 1.57
Remodeled respiration in ndufs4 with low phosphorylation efficiency suppresses Arabidopsis germination and growth and alters control of metabolism at night. Plant Physiol (2009) 1.53
Similar protein phosphatases control starch metabolism in plants and glycogen metabolism in mammals. J Biol Chem (2006) 1.53
Roles of cell-wall invertases and monosaccharide transporters in the growth and development of Arabidopsis. J Exp Bot (2003) 1.50
Alternative oxidases in Arabidopsis: a comparative analysis of differential expression in the gene family provides new insights into function of non-phosphorylating bypasses. Biochim Biophys Acta (2006) 1.49
Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. Plant Physiol (2008) 1.48
Glucan, water dikinase activity stimulates breakdown of starch granules by plastidial beta-amylases. Plant Physiol (2007) 1.48
TCP transcription factors link the regulation of genes encoding mitochondrial proteins with the circadian clock in Arabidopsis thaliana. Plant Cell (2010) 1.47
Evidence for distinct mechanisms of starch granule breakdown in plants. J Biol Chem (2006) 1.47
Ozone risk assessment for plants: central role of metabolism-dependent changes in reducing power. Environ Pollut (2008) 1.46
Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Mol Cell Proteomics (2007) 1.45
Mapping metabolic and transcript temporal switches during germination in rice highlights specific transcription factors and the role of RNA instability in the germination process. Plant Physiol (2008) 1.45
Regulation of NAD- and NADP-dependent isocitrate dehydrogenases by reduction levels of pyridine nucleotides in mitochondria and cytosol of pea leaves. Biochim Biophys Acta (2003) 1.42
Mitochondrial complex I from Arabidopsis and rice: orthologs of mammalian and fungal components coupled with plant-specific subunits. Biochim Biophys Acta (2003) 1.42
alpha-Amylase is not required for breakdown of transitory starch in Arabidopsis leaves. J Biol Chem (2005) 1.41
Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis. Plant Cell (2009) 1.41
Stress-induced co-expression of alternative respiratory chain components in Arabidopsis thaliana. Plant Mol Biol (2005) 1.41
Regulation of seed germination and seedling growth by chemical signals from burning vegetation. Annu Rev Plant Biol (2012) 1.40
Differential response of gray poplar leaves and roots underpins stress adaptation during hypoxia. Plant Physiol (2008) 1.39
Signaling from the endoplasmic reticulum activates brassinosteroid signaling and promotes acclimation to stress in Arabidopsis. Sci Signal (2010) 1.38
Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination. Plant Cell (2005) 1.35
The Arabidopsis glutathione transferase gene family displays complex stress regulation and co-silencing multiple genes results in altered metabolic sensitivity to oxidative stress. Plant J (2009) 1.35
The nucleotidase/phosphatase SAL1 is a negative regulator of drought tolerance in Arabidopsis. Plant J (2008) 1.33
Salicylic acid is an uncoupler and inhibitor of mitochondrial electron transport. Plant Physiol (2003) 1.30
The seminal fluid proteome of the honeybee Apis mellifera. Proteomics (2009) 1.29
A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. Plant Physiol (2004) 1.27
Environmental stress causes oxidative damage to plant mitochondria leading to inhibition of glycine decarboxylase. J Biol Chem (2002) 1.26
Differential impact of environmental stresses on the pea mitochondrial proteome. Mol Cell Proteomics (2005) 1.25
The metabolome of Chlamydomonas reinhardtii following induction of anaerobic H2 production by sulfur depletion. J Biol Chem (2009) 1.25
SUPPRESSOR OF MORE AXILLARY GROWTH2 1 controls seed germination and seedling development in Arabidopsis. Plant Physiol (2013) 1.25
The pentatricopeptide repeat gene OTP51 with two LAGLIDADG motifs is required for the cis-splicing of plastid ycf3 intron 2 in Arabidopsis thaliana. Plant J (2008) 1.24
Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. Mol Cell Proteomics (2008) 1.23
Defining core metabolic and transcriptomic responses to oxygen availability in rice embryos and young seedlings. Plant Physiol (2009) 1.23
Does anoxia tolerance involve altering the energy currency towards PPi? Trends Plant Sci (2008) 1.23
Towards an analysis of the rice mitochondrial proteome. Plant Physiol (2003) 1.22
Burning vegetation produces cyanohydrins that liberate cyanide and stimulate seed germination. Nat Commun (2011) 1.21
Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2010) 1.21
Lipid utilization, gluconeogenesis, and seedling growth in Arabidopsis mutants lacking the glyoxylate cycle enzyme malate synthase. J Biol Chem (2004) 1.21
Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. J Proteome Res (2011) 1.20
Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis. Plant Physiol (2008) 1.20
Experimental analysis of the rice mitochondrial proteome, its biogenesis, and heterogeneity. Plant Physiol (2008) 1.20
The Arabidopsis ortholog of rice DWARF27 acts upstream of MAX1 in the control of plant development by strigolactones. Plant Physiol (2012) 1.20
A central role for the peroxisomal membrane in glyoxylate cycle function. Biochim Biophys Acta (2006) 1.18
Increasing vaccination rates among health care workers using unit "champions" as a motivator. Can J Infect Control (2009) 1.17
Arabidopsis peroxisomal malate dehydrogenase functions in beta-oxidation but not in the glyoxylate cycle. Plant J (2007) 1.17
Ordered assembly of mitochondria during rice germination begins with pro-mitochondrial structures rich in components of the protein import apparatus. Plant Mol Biol (2006) 1.16
Refining the definition of plant mitochondrial presequences through analysis of sorting signals, N-terminal modifications, and cleavage motifs. Plant Physiol (2009) 1.15
The impact of light intensity on shade-induced leaf senescence. Plant Cell Environ (2012) 1.15
The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show differential sensitivity to short- and long-term exposure to low temperature. Plant J (2006) 1.13
Mitochondrial complex II has a key role in mitochondrial-derived reactive oxygen species influence on plant stress gene regulation and defense. Proc Natl Acad Sci U S A (2011) 1.13
Lipoic acid-dependent oxidative catabolism of alpha-keto acids in mitochondria provides evidence for branched-chain amino acid catabolism in Arabidopsis. Plant Physiol (2004) 1.13
Blue-native PAGE in plants: a tool in analysis of protein-protein interactions. Plant Methods (2005) 1.12
Insights into female sperm storage from the spermathecal fluid proteome of the honeybee Apis mellifera. Genome Biol (2009) 1.12
Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis. Plant Physiol (2011) 1.11
Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana. FEBS Lett (2008) 1.11
The redox-sensitive transcription factor Rap2.4a controls nuclear expression of 2-Cys peroxiredoxin A and other chloroplast antioxidant enzymes. BMC Plant Biol (2008) 1.10
Phage-type RNA polymerase RPOTmp performs gene-specific transcription in mitochondria of Arabidopsis thaliana. Plant Cell (2009) 1.10
Molecular distinction between alternative oxidase from monocots and dicots. Plant Physiol (2002) 1.10
A plant outer mitochondrial membrane protein with high amino acid sequence identity to a chloroplast protein import receptor. FEBS Lett (2004) 1.10
The Arabidopsis thaliana 2-D gel mitochondrial proteome: Refining the value of reference maps for assessing protein abundance, contaminants and post-translational modifications. Proteomics (2011) 1.09
The different fates of mitochondria and chloroplasts during dark-induced senescence in Arabidopsis leaves. Plant Cell Environ (2007) 1.09
Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. Plant Physiol (2009) 1.09
Free-flow electrophoresis for purification of plant mitochondria by surface charge. Plant J (2007) 1.08
Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. Plant Mol Biol (2006) 1.08
Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. J Proteome Res (2008) 1.07
Mitochondrial biogenesis and function in Arabidopsis. Arabidopsis Book (2008) 1.06