A tribute to Attila Szabo.

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy. Nature (2002) 6.92

The protein folding 'speed limit'. Curr Opin Struct Biol (2004) 6.19

Protein folding studied by single-molecule FRET. Curr Opin Struct Biol (2008) 4.33

Intrinsic rates and activation free energies from single-molecule pulling experiments. Phys Rev Lett (2006) 4.04

Theory, analysis, and interpretation of single-molecule force spectroscopy experiments. Proc Natl Acad Sci U S A (2008) 3.51

Optimized molecular dynamics force fields applied to the helix-coil transition of polypeptides. J Phys Chem B (2009) 3.17

Are current molecular dynamics force fields too helical? Biophys J (2008) 3.13

Reaction coordinates and rates from transition paths. Proc Natl Acad Sci U S A (2005) 3.12

Experimental tests of villin subdomain folding simulations. J Mol Biol (2003) 3.08

Single-molecule measurement of protein folding kinetics. Science (2003) 3.08

Polyproline and the "spectroscopic ruler" revisited with single-molecule fluorescence. Proc Natl Acad Sci U S A (2005) 3.01

Coarse master equations for peptide folding dynamics. J Phys Chem B (2008) 3.01

Sub-microsecond protein folding. J Mol Biol (2006) 2.72

Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations. Proc Natl Acad Sci U S A (2007) 2.65

Water in nonpolar confinement: from nanotubes to proteins and beyond. Annu Rev Phys Chem (2008) 2.57

Osmotic water transport through carbon nanotube membranes. Proc Natl Acad Sci U S A (2003) 2.41

High-resolution x-ray crystal structures of the villin headpiece subdomain, an ultrafast folding protein. Proc Natl Acad Sci U S A (2005) 2.37

Experimental determination of upper bound for transition path times in protein folding from single-molecule photon-by-photon trajectories. Proc Natl Acad Sci U S A (2009) 2.29

Water-gated mechanism of proton translocation by cytochrome c oxidase. Biochim Biophys Acta (2003) 2.26

SAXS ensemble refinement of ESCRT-III CHMP3 conformational transitions. Structure (2011) 2.24

Crystal structure and allosteric activation of protein kinase C βII. Cell (2011) 2.19

Binding-induced folding of a natively unstructured transcription factor. PLoS Comput Biol (2008) 2.04

Single-molecule fluorescence experiments determine protein folding transition path times. Science (2012) 2.00

Molecular dynamics simulations of Alzheimer's beta-amyloid protofilaments. J Mol Biol (2005) 1.99

Reactive flux and folding pathways in network models of coarse-grained protein dynamics. J Chem Phys (2009) 1.93

Cooperative water filling of a nonpolar protein cavity observed by high-pressure crystallography and simulation. Proc Natl Acad Sci U S A (2005) 1.91

Chemical, physical, and theoretical kinetics of an ultrafast folding protein. Proc Natl Acad Sci U S A (2008) 1.90

Slow protein conformational dynamics from multiple experimental structures: the helix/sheet transition of arc repressor. Structure (2005) 1.86

Proton transport through water-filled carbon nanotubes. Phys Rev Lett (2003) 1.86

Effect of flexibility and cis residues in single-molecule FRET studies of polyproline. Proc Natl Acad Sci U S A (2007) 1.81

Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins. Biophys J (2007) 1.78

Electric field and temperature effects on water in the narrow nonpolar pores of carbon nanotubes. J Chem Phys (2004) 1.78

Coarse-grained models for simulations of multiprotein complexes: application to ubiquitin binding. J Mol Biol (2007) 1.74

Coordinate-dependent diffusion in protein folding. Proc Natl Acad Sci U S A (2009) 1.73

Pore opening and closing of a pentameric ligand-gated ion channel. Proc Natl Acad Sci U S A (2010) 1.71

Measuring internal friction of an ultrafast-folding protein. Proc Natl Acad Sci U S A (2008) 1.69

Peptide loop-closure kinetics from microsecond molecular dynamics simulations in explicit solvent. J Am Chem Soc (2002) 1.69

Single-file transport of water molecules through a carbon nanotube. Phys Rev Lett (2002) 1.67

Coarse master equation from Bayesian analysis of replica molecular dynamics simulations. J Phys Chem B (2005) 1.64

Water clusters in nonpolar cavities. Proc Natl Acad Sci U S A (2004) 1.59

Nucleic acid transport through carbon nanotube membranes. Proc Natl Acad Sci U S A (2004) 1.58

Diffusive model of protein folding dynamics with Kramers turnover in rate. Phys Rev Lett (2006) 1.53

Convergence and error estimation in free energy calculations using the weighted histogram analysis method. J Comput Chem (2011) 1.52

Diffusion and electrophoretic mobility of single-stranded RNA from molecular dynamics simulations. Biophys J (2004) 1.49

Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography. Proc Natl Acad Sci U S A (2012) 1.46

Pulling direction as a reaction coordinate for the mechanical unfolding of single molecules. J Phys Chem B (2008) 1.46

Peptide folding kinetics from replica exchange molecular dynamics. Phys Rev E Stat Nonlin Soft Matter Phys (2008) 1.45

Ion transport through membrane-spanning nanopores studied by molecular dynamics simulations and continuum electrostatics calculations. Biophys J (2005) 1.43

Catalytic mechanism of RNA backbone cleavage by ribonuclease H from quantum mechanics/molecular mechanics simulations. J Am Chem Soc (2011) 1.42

Determination of ultrafast protein folding rates from loop formation dynamics. J Mol Biol (2005) 1.42

Static and dynamic correlations in water at hydrophobic interfaces. Proc Natl Acad Sci U S A (2008) 1.41

Effects of denaturants on the dynamics of loop formation in polypeptides. Biophys J (2006) 1.39

Prediction of charge-induced molecular alignment of biomolecules dissolved in dilute liquid-crystalline phases. Biophys J (2004) 1.38

The Vps27/Hse1 complex is a GAT domain-based scaffold for ubiquitin-dependent sorting. Dev Cell (2007) 1.36

Estimating free-energy barrier heights for an ultrafast folding protein from calorimetric and kinetic data. J Phys Chem B (2008) 1.34

Native contacts determine protein folding mechanisms in atomistic simulations. Proc Natl Acad Sci U S A (2013) 1.33

Understanding the shape of sickled red cells. Biophys J (2004) 1.32

Glutamic acid 242 is a valve in the proton pump of cytochrome c oxidase. Proc Natl Acad Sci U S A (2008) 1.31

Structure and dynamics of parallel beta-sheets, hydrophobic core, and loops in Alzheimer's A beta fibrils. Biophys J (2007) 1.26

Protein conformational transitions explored by mixed elastic network models. Proteins (2007) 1.26

Protein folding kinetics under force from molecular simulation. J Am Chem Soc (2008) 1.25

Relaxation rate for an ultrafast folding protein is independent of chemical denaturant concentration. J Am Chem Soc (2007) 1.25

Artificial reaction coordinate "tunneling" in free-energy calculations: the catalytic reaction of RNase H. J Comput Chem (2009) 1.24

Hybrid structural model of the complete human ESCRT-0 complex. Structure (2009) 1.23

Kinetics of intramolecular contact formation in a denatured protein. J Mol Biol (2003) 1.22

Solution structure of the ESCRT-I complex by small-angle X-ray scattering, EPR, and FRET spectroscopy. Proc Natl Acad Sci U S A (2011) 1.22

Replica exchange simulations of transient encounter complexes in protein-protein association. Proc Natl Acad Sci U S A (2008) 1.21

The molecular mechanism of substrate engagement and immunosuppressant inhibition of calcineurin. PLoS Biol (2013) 1.21

Extracting rate coefficients from single-molecule photon trajectories and FRET efficiency histograms for a fast-folding protein. J Phys Chem A (2010) 1.20

Phosphate release coupled to rotary motion of F1-ATPase. Proc Natl Acad Sci U S A (2013) 1.18

A tertiary two-state allosteric model for hemoglobin. Biophys Chem (2002) 1.18

Single-molecule fluorescence probes dynamics of barrier crossing. Nature (2013) 1.15

Distinguishing between protein dynamics and dye photophysics in single-molecule FRET experiments. Biophys J (2010) 1.15

Folding and aggregation kinetics of a beta-hairpin. Biochemistry (2006) 1.14

Kinetics and mechanism of proton transport across membrane nanopores. Phys Rev Lett (2006) 1.14

Molecular binding: Under water's influence. Nat Chem (2010) 1.13

Measuring dynamic flexibility of the coil state of a helix-forming peptide. J Mol Biol (2002) 1.11

New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels. Proc Natl Acad Sci U S A (2004) 1.11

Structural basis of p38α regulation by hematopoietic tyrosine phosphatase. Nat Chem Biol (2011) 1.11

Structural rigidity of a large cavity-containing protein revealed by high-pressure crystallography. J Mol Biol (2006) 1.10

Metastable water clusters in the nonpolar cavities of the thermostable protein tetrabrachion. J Am Chem Soc (2007) 1.10

Coarse nonlinear dynamics and metastability of filling-emptying transitions: water in carbon nanotubes. Phys Rev Lett (2005) 1.09

Slow conformational dynamics and unfolding of the calmodulin C-terminal domain. J Am Chem Soc (2007) 1.09

Nonspecific binding limits the number of proteins in a cell and shapes their interaction networks. Proc Natl Acad Sci U S A (2010) 1.06

Solution structure of the ESCRT-I and -II supercomplex: implications for membrane budding and scission. Structure (2012) 1.06

Water in the polar and nonpolar cavities of the protein interleukin-1β. J Phys Chem B (2010) 1.05

Effect of flexibility on hydrophobic behavior of nanotube water channels. J Chem Phys (2005) 1.04

Evidence for a partially structured state of the amylin monomer. Biophys J (2009) 1.04

Macroscopically ordered water in nanopores. Proc Natl Acad Sci U S A (2008) 1.02

Kinetic models of redox-coupled proton pumping. Proc Natl Acad Sci U S A (2007) 1.02

Kinetic gating of the proton pump in cytochrome c oxidase. Proc Natl Acad Sci U S A (2009) 1.01

Atomistic insights into rhodopsin activation from a dynamic model. J Am Chem Soc (2008) 1.00

Comment on "Force-clamp spectroscopy monitors the folding trajectory of a single protein". Science (2005) 1.00

Sedimentation studies on human amylin fail to detect low-molecular-weight oligomers. Biophys J (2008) 1.00

Making connections between ultrafast protein folding kinetics and molecular dynamics simulations. Proc Natl Acad Sci U S A (2011) 1.00

Protein side-chain motion and hydration in proton-transfer pathways. Results for cytochrome p450cam. J Am Chem Soc (2003) 1.00

Differential inhibition of HIV-1 and SIV envelope-mediated cell fusion by C34 peptides derived from the C-terminal heptad repeat of gp41 from diverse strains of HIV-1, HIV-2, and SIV. J Med Chem (2005) 0.99