PubRank

Fangqing Zhao

Author PubWeight™ 57.99‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Complete Khoisan and Bantu genomes from southern Africa. Nature 2010 9.06
2 Sequencing the nuclear genome of the extinct woolly mammoth. Nature 2008 4.31
3 The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus). Genome Res 2009 2.30
4 inGAP: an integrated next-generation genome analysis pipeline. Bioinformatics 2009 2.06
5 Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil). Proc Natl Acad Sci U S A 2011 1.99
6 Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change. Proc Natl Acad Sci U S A 2012 1.98
7 mirTools: microRNA profiling and discovery based on high-throughput sequencing. Nucleic Acids Res 2010 1.70
8 Metagenome-wide analysis of antibiotic resistance genes in a large cohort of human gut microbiota. Nat Commun 2013 1.65
9 HTQC: a fast quality control toolkit for Illumina sequencing data. BMC Bioinformatics 2013 1.58
10 MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation. Nucleic Acids Res 2010 1.49
11 Metagenomic profile of the bacterial communities associated with Ixodes ricinus ticks. PLoS One 2011 1.43
12 Dysbiosis signature of fecal microbiota in colorectal cancer patients. Microb Ecol 2013 1.37
13 inGAP-sv: a novel scheme to identify and visualize structural variation from paired end mapping data. Nucleic Acids Res 2011 1.31
14 Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease. Sci Rep 2013 1.30
15 Characterization of the small RNA transcriptomes of androgen dependent and independent prostate cancer cell line by deep sequencing. PLoS One 2010 1.21
16 Composition-based classification of short metagenomic sequences elucidates the landscapes of taxonomic and functional enrichment of microorganisms. Nucleic Acids Res 2012 1.16
17 Extensive lysine acetylation occurs in evolutionarily conserved metabolic pathways and parasite-specific functions during Plasmodium falciparum intraerythrocytic development. Mol Microbiol 2013 1.00
18 A close phylogenetic relationship between Sipuncula and Annelida evidenced from the complete mitochondrial genome sequence of Phascolosoma esculenta. BMC Genomics 2009 0.96
19 Carotenoid biosynthesis in cyanobacteria: structural and evolutionary scenarios based on comparative genomics. Int J Biol Sci 2006 0.94
20 Nodeomics: pathogen detection in vertebrate lymph nodes using meta-transcriptomics. PLoS One 2010 0.92
21 Detection, annotation and visualization of alternative splicing from RNA-Seq data with SplicingViewer. Genomics 2011 0.90
22 Establishment of a micro-particle bombardment transformation system for Dunaliella salina. J Microbiol 2005 0.90
23 Small RNA transcriptome investigation based on next-generation sequencing technology. J Genet Genomics 2011 0.89
24 Codon usage patterns and adaptive evolution of marine unicellular cyanobacteria Synechococcus and Prochlorococcus. Mol Phylogenet Evol 2011 0.88
25 Genome-wide survey of putative serine/threonine protein kinases in cyanobacteria. BMC Genomics 2007 0.87
26 Evidence for positive Darwinian selection of Vip gene in Bacillus thuringiensis. J Genet Genomics 2007 0.86
27 Phycobilisomes linker family in cyanobacterial genomes: divergence and evolution. Int J Biol Sci 2007 0.86
28 Combinational biosynthesis of a fluorescent cyanobacterial holo-alpha-phycocyanin in Escherichia coli by using one expression vector. Appl Biochem Biotechnol 2007 0.83
29 Soil bacterial communities shaped by geochemical factors and land use in a less-explored area, Tibetan Plateau. BMC Genomics 2013 0.82
30 cTFbase: a database for comparative genomics of transcription factors in cyanobacteria. BMC Genomics 2007 0.82
31 Characterization of human αβTCR repertoire and discovery of D-D fusion in TCRβ chains. Protein Cell 2014 0.81
32 Evidence of extensive homologous recombination in the core genome of rickettsia. Comp Funct Genomics 2009 0.81
33 Comparative analysis of fatty acid desaturases in cyanobacterial genomes. Comp Funct Genomics 2008 0.80
34 Ancestry of the Australian termitivorous numbat. Mol Biol Evol 2013 0.80
35 Lineage-specific domain fusion in the evolution of purine nucleotide cyclases in cyanobacteria. J Mol Evol 2008 0.79
36 Comparison of envelope-related genes in unicellular and filamentous cyanobacteria. Comp Funct Genomics 2007 0.79
37 PlasmoGF: an integrated system for comparative genomics and phylogenetic analysis of Plasmodium gene families. Bioinformatics 2008 0.79
38 The repertoire and evolution of ATP-binding cassette systems in Synechococcus and Prochlorococcus. J Mol Evol 2009 0.78
39 Genome-wide identification and divergent transcriptional expression of StAR-related lipid transfer (START) genes in teleosts. Gene 2013 0.76
40 The complete mitochondrial genome of the ridgetail white prawn Exopalaemon carinicauda Holthuis, 1950 (Crustacean: Decapoda: Palaemonidae) revealed a novel rearrangement of tRNA genes. Gene 2009 0.76
41 Complete mitochondrial genome of Membranipora grandicella (Bryozoa: Cheilostomatida) determined with next-generation sequencing: the first representative of the suborder Malacostegina. Comp Biochem Physiol Part D Genomics Proteomics 2012 0.76
42 FlyPhy: a phylogenomic analysis platform for Drosophila genes and gene families. BMC Bioinformatics 2009 0.75
43 Circular RNA identification based on multiple seed matching. Brief Bioinform 2017 0.75
44 [Detection and analysis of copy number variation from 1000 Genomes trio data]. Nan Fang Yi Ke Da Xue Xue Bao 2015 0.75
45 Cloning, expression and characterization of phycoerythrin gene from Ceramium boydenn. DNA Seq 2006 0.75