Published in J Am Soc Mass Spectrom on July 18, 2008
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Determination of sites citrullinated by peptidylarginine deiminase using 18O stable isotope labeling and mass spectrometry. Rapid Commun Mass Spectrom (2005) 0.92
Photochemical and electrophysical production of radicals on millisecond timescales to probe the structure, dynamics and interactions of proteins. Photochem Photobiol Sci (2004) 0.89
Solution insights into the structure of the Efb/C3 complement inhibitory complex as revealed by lysine acetylation and mass spectrometry. J Am Soc Mass Spectrom (2008) 0.89
A mechanistic study of electrospray mass spectrometry: charge gradients within electrospray droplets and their influence on ion response. J Am Soc Mass Spectrom (2001) 0.87
Galectin-1 is an inductor of pancreatic stellate cell activation. Cell Signal (2005) 0.86
Galectin-induced activation of the transcription factors NFAT and AP-1 in human Jurkat T-lymphocytes. Cell Signal (2002) 0.85
Determination of protein-RNA interaction sites in the Cbf5-H/ACA guide RNA complex by mass spectrometric protein footprinting. Biochemistry (2008) 0.84
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Fourier transform mass spectrometry to monitor hyaluronan-protein interactions: use of hydrogen/deuterium amide exchange. Rapid Commun Mass Spectrom (2007) 0.81
Primary and secondary locations of charge sites in angiotensin II (M + 2H)2+ ions formed by electrospray ionization. J Am Soc Mass Spectrom (2000) 0.80
Studying protein-carbohydrate interactions by amide hydrogen/deuterium exchange mass spectrometry. Rapid Commun Mass Spectrom (2002) 0.80
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An integrated transcriptomic and computational analysis for biomarker identification in gastric cancer. Nucleic Acids Res (2010) 1.73
Fast photochemical oxidation of protein footprints faster than protein unfolding. Anal Chem (2009) 1.69
Effects of glycosylation on peptide conformation: a synergistic experimental and computational study. J Am Chem Soc (2004) 1.37
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Proteomic analysis of cast cuticles from Anopheles gambiae by tandem mass spectrometry. Insect Biochem Mol Biol (2006) 1.33
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Galacturonosyltransferase (GAUT)1 and GAUT7 are the core of a plant cell wall pectin biosynthetic homogalacturonan:galacturonosyltransferase complex. Proc Natl Acad Sci U S A (2011) 1.30
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An oligopeptide transporter gene family in Arabidopsis. Plant Physiol (2002) 1.25
Structural glycobiology: a game of snakes and ladders. Glycobiology (2008) 1.25
Up-regulation of NG2 proteoglycan and interferon-induced transmembrane proteins 1 and 3 in mouse astrocytoma: a membrane proteomics approach. Cancer Lett (2008) 1.22
Involvement of water in carbohydrate-protein binding: concanavalin A revisited. J Am Chem Soc (2008) 1.13
The genetic basis of parallel and divergent phenotypic responses in evolving populations of Escherichia coli. Proc Biol Sci (2008) 1.12
Molecular dynamics simulations of galectin-1-oligosaccharide complexes reveal the molecular basis for ligand diversity. Proteins (2003) 1.09
Molecular simulations of carbohydrates and protein-carbohydrate interactions: motivation, issues and prospects. Drug Discov Today (2010) 1.07
Glycoproteomics of Trypanosoma cruzi trypomastigotes using subcellular fractionation, lectin affinity, and stable isotope labeling. J Proteome Res (2006) 1.07
Oligomeric structure of the chemokine CCL5/RANTES from NMR, MS, and SAXS data. Structure (2011) 1.05
Identification of contractile vacuole proteins in Trypanosoma cruzi. PLoS One (2011) 1.05
Tools for glycoproteomic analysis: size exclusion chromatography facilitates identification of tryptic glycopeptides with N-linked glycosylation sites. J Proteome Res (2006) 1.05
Understanding the bacterial polysaccharide antigenicity of Streptococcus agalactiae versus Streptococcus pneumoniae. Proc Natl Acad Sci U S A (2006) 1.04
Comparative proteomic analysis of Botrytis cinerea secretome. J Proteome Res (2009) 1.04
The xenograft antigen bound to Griffonia simplicifolia lectin 1-B(4). X-ray crystal structure of the complex and molecular dynamics characterization of the binding site. J Biol Chem (2001) 1.04
Enthalpy array analysis of enzymatic and binding reactions. Anal Biochem (2008) 1.03
Interlaboratory study on differential analysis of protein glycosylation by mass spectrometry: the ABRF glycoprotein research multi-institutional study 2012. Mol Cell Proteomics (2013) 1.03
The Botrytis cinerea early secretome. Proteomics (2010) 1.01
Biosynthesis of 4-thiouridine in tRNA in the methanogenic archaeon Methanococcus maripaludis. J Biol Chem (2012) 1.01
Enzymatic basis for N-glycan sialylation: structure of rat α2,6-sialyltransferase (ST6GAL1) reveals conserved and unique features for glycan sialylation. J Biol Chem (2013) 1.01
Structural elucidation of type III group B Streptococcus capsular polysaccharide using molecular dynamics simulations: the role of sialic acid. Carbohydr Res (2005) 1.00
A hydration study of (1-->4) and (1-->6) linked alpha-glucans by comparative 10 ns molecular dynamics simulations and 500-MHz NMR. J Comput Chem (2004) 0.99
From agonist to antagonist: structure and dynamics of innate immune glycoprotein MD-2 upon recognition of variably acylated bacterial endotoxins. Mol Immunol (2011) 0.97
Extension of the GLYCAM06 Biomolecular Force Field to Lipids, Lipid Bilayers and Glycolipids. Mol Simul (2008) 0.97
Structural basis of the inhibition of Golgi alpha-mannosidase II by mannostatin A and the role of the thiomethyl moiety in ligand-protein interactions. J Am Chem Soc (2006) 0.96
Atomic-resolution conformational analysis of the GM3 ganglioside in a lipid bilayer and its implications for ganglioside-protein recognition at membrane surfaces. Glycobiology (2008) 0.96
Conversion of methionine into homocysteic acid in heavily oxidized proteomics samples. Rapid Commun Mass Spectrom (2010) 0.96
Pulsed electron beam water radiolysis for submicrosecond hydroxyl radical protein footprinting. Anal Chem (2009) 0.95
Rapid identification of oxidation-induced conformational changes by kinetic analysis. Rapid Commun Mass Spectrom (2007) 0.95
Quantitative carbamylation as a stable isotopic labeling method for comparative proteomics. Rapid Commun Mass Spectrom (2007) 0.95
Presentation of membrane-anchored glycosphingolipids determined from molecular dynamics simulations and NMR paramagnetic relaxation rate enhancement. J Am Chem Soc (2010) 0.94
Time encoded multicolor fluorescence detection in a microfluidic flow cytometer. Lab Chip (2012) 0.94
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). Mol Cell Proteomics (2011) 0.94
LC-MS(n) analysis of isomeric chondroitin sulfate oligosaccharides using a chemical derivatization strategy. J Am Soc Mass Spectrom (2011) 0.94
Computational screening of the human TF-glycome provides a structural definition for the specificity of anti-tumor antibody JAA-F11. PLoS One (2013) 0.93
Glycoproteomic analysis of embryonic stem cells: identification of potential glycobiomarkers using lectin affinity chromatography of glycopeptides. J Proteome Res (2010) 0.93
Use of amide exchange mass spectrometry to study conformational changes within the endopolygalacturonase II-homogalacturonan-polygalacturonase inhibiting protein system. Biochemistry (2002) 0.93
Identification and localization of Myxococcus xanthus porins and lipoproteins. PLoS One (2011) 0.93
A potential pitfall in 18O-based N-linked glycosylation site mapping. Rapid Commun Mass Spectrom (2007) 0.93
Importance of ligand conformational energies in carbohydrate docking: Sorting the wheat from the chaff. J Comput Chem (2013) 0.92
Aliphatic peptidyl hydroperoxides as a source of secondary oxidation in hydroxyl radical protein footprinting. J Am Soc Mass Spectrom (2009) 0.92
Characterization of glycosaminoglycans by 15N NMR spectroscopy and in vivo isotopic labeling. Anal Chem (2010) 0.91
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles). J Proteome Res (2011) 0.91
Presentation, presentation, presentation! Molecular-level insight into linker effects on glycan array screening data. Glycobiology (2013) 0.91
Amide proton back-exchange in deuterated peptides: applications to MS and NMR analyses. Anal Chem (2006) 0.90
Proteins associated with the Myxococcus xanthus extracellular matrix. J Bacteriol (2007) 0.90
Synergistic roles of Helicobacter pylori methionine sulfoxide reductase and GroEL in repairing oxidant-damaged catalase. J Biol Chem (2011) 0.90
The conformational properties of methyl alpha-(2,8)-di/trisialosides and their N-acyl analogues: implications for anti-Neisseria meningitidis B vaccine design. Biochemistry (2008) 0.90
Improved identification and relative quantification of sites of peptide and protein oxidation for hydroxyl radical footprinting. J Am Soc Mass Spectrom (2013) 0.90
A proteomic study of pectin-degrading enzymes secreted by Botrytis cinerea grown in liquid culture. Proteomics (2009) 0.90
Structure and binding analysis of Polyporus squamosus lectin in complex with the Neu5Ac{alpha}2-6Gal{beta}1-4GlcNAc human-type influenza receptor. Glycobiology (2011) 0.89
Conformational analysis of therapeutic proteins by hydroxyl radical protein footprinting. AAPS J (2012) 0.87
Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam principles). Proteomics (2011) 0.87
Simple modification of a protein database for mass spectral identification of N-linked glycopeptides. Rapid Commun Mass Spectrom (2005) 0.87
An approach for separation and complete structural sequencing of heparin/heparan sulfate-like oligosaccharides. Anal Chem (2013) 0.87
On achieving experimental accuracy from molecular dynamics simulations of flexible molecules: aqueous glycerol. J Phys Chem A (2008) 0.86
Probing the pH-dependent prepore to pore transition of Bacillus anthracis protective antigen with differential oxidative protein footprinting. Biochemistry (2008) 0.85
Proteomic analysis of ripening tomato fruit infected by Botrytis cinerea. J Proteome Res (2012) 0.85
Determination of protein-RNA interaction sites in the Cbf5-H/ACA guide RNA complex by mass spectrometric protein footprinting. Biochemistry (2008) 0.84
N-Glycosylation pattern of the zymogenic form of human matrix metalloproteinase-9. Bioorg Chem (2002) 0.84
Catalytic mechanism of Sep-tRNA:Cys-tRNA synthase: sulfur transfer is mediated by disulfide and persulfide. J Biol Chem (2011) 0.84
Chemokine oligomerization in cell signaling and migration. Prog Mol Biol Transl Sci (2013) 0.83
Analysis of the site-specific N-glycosylation of beta1,6 N-acetylglucosaminyltransferase V. Glycobiology (2004) 0.83
Unraveling cellulose microfibrils: a twisted tale. Biopolymers (2013) 0.83
Carbohydrate recognition by an architecturally complex α-N-acetylglucosaminidase from Clostridium perfringens. PLoS One (2012) 0.82
Proteome analysis of Cry4Ba toxin-interacting Aedes aegypti lipid rafts using geLC-MS/MS. J Proteome Res (2012) 0.82
Trypsin is the primary mechanism by which the (18)O isotopic label is lost in quantitative proteomic studies. Anal Biochem (2006) 0.82
The influence of N-linked glycans on the molecular dynamics of the HIV-1 gp120 V3 loop. PLoS One (2013) 0.82
Quantifying the role of water in protein-carbohydrate interactions. J Phys Chem A (2003) 0.82
Inhibition of Golgi mannosidase II with mannostatin A analogues: synthesis, biological evaluation, and structure-activity relationship studies. Chembiochem (2004) 0.82
Liquid chromatography-selected reaction monitoring (LC-SRM) approach for the separation and quantitation of sialylated N-glycans linkage isomers. Anal Chem (2014) 0.82
Dependence of pyranose ring puckering on anomeric configuration: methyl idopyranosides. J Phys Chem B (2012) 0.82
Exploiting enzyme specificities in digestions of chondroitin sulfates A and C: production of well-defined hexasaccharides. Glycobiology (2012) 0.82
Glycan analysis of recombinant Aspergillus niger endo-polygalacturonase A. Carbohydr Res (2006) 0.82
Expression of P2X6, a purinergic receptor subunit, is affected by dietary zinc deficiency in rat hippocampus. Biol Trace Elem Res (2003) 0.81
Fourier transform mass spectrometry to monitor hyaluronan-protein interactions: use of hydrogen/deuterium amide exchange. Rapid Commun Mass Spectrom (2007) 0.81
Molecular recognition of Candida albicans (1->2)-β-mannan oligosaccharides by a protective monoclonal antibody reveals the immunodominance of internal saccharide residues. J Biol Chem (2012) 0.81
Comprehensive glycan analysis of recombinant Aspergillus niger endo-polygalacturonase C. Anal Biochem (2006) 0.81
Mitochondrial membrane complex that contains proteins necessary for tRNA import in Trypanosoma brucei. J Biol Chem (2012) 0.80
Alkyl hydroperoxide reductase repair by Helicobacter pylori methionine sulfoxide reductase. J Bacteriol (2013) 0.80
Studying protein-carbohydrate interactions by amide hydrogen/deuterium exchange mass spectrometry. Rapid Commun Mass Spectrom (2002) 0.80
Optimization of data-dependent acquisition parameters for coupling high-speed separations with LC-MS/MS for protein identifications. J Biomol Tech (2013) 0.79
Seasonality in the migration and establishment of H3N2 Influenza lineages with epidemic growth and decline. BMC Evol Biol (2014) 0.79