Real-time luminescence monitoring of cell-cycle and respiratory oscillations in yeast.

PubWeight™: 1.14‹?› | Rank: Top 10%

🔗 View Article (PMC 2584751)

Published in Proc Natl Acad Sci U S A on November 12, 2008

Authors

J Brian Robertson1, Chris C Stowers, Erik Boczko, Carl Hirschie Johnson

Author Affiliations

1: Department of Biological Sciences, Vanderbilt University, Nashville, TN 37240, USA.

Articles citing this

Metabolic cycling without cell division cycling in respiring yeast. Proc Natl Acad Sci U S A (2011) 1.10

In vivo bioluminescence imaging and histopathopathologic analysis reveal distinct roles for resident and recruited immune effector cells in defense against invasive aspergillosis. BMC Microbiol (2010) 1.07

A circadian clock in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A (2010) 1.07

A switchable light-input, light-output system modelled and constructed in yeast. J Biol Eng (2009) 0.95

Visible light alters yeast metabolic rhythms by inhibiting respiration. Proc Natl Acad Sci U S A (2013) 0.86

ODE, RDE and SDE models of cell cycle dynamics and clustering in yeast. J Biol Dyn (2010) 0.86

Live-cell monitoring of periodic gene expression in synchronous human cells identifies Forkhead genes involved in cell cycle control. Mol Biol Cell (2012) 0.86

Behavior of a metabolic cycling population at the single cell level as visualized by fluorescent gene expression reporters. PLoS One (2010) 0.86

Clustering in cell cycle dynamics with general response/signaling feedback. J Theor Biol (2011) 0.85

Cell cycle dynamics: clustering is universal in negative feedback systems. J Math Biol (2014) 0.83

Measuring fast gene dynamics in single cells with time-lapse luminescence microscopy. Mol Biol Cell (2014) 0.82

Systems approaches for the study of metabolic cycles in yeast. Curr Opin Genet Dev (2010) 0.82

Luminescence as a continuous real-time reporter of promoter activity in yeast undergoing respiratory oscillations or cell division rhythms. Methods Mol Biol (2011) 0.79

Light-dependent and circadian transcription dynamics in vivo recorded with a destabilized luciferase reporter in Neurospora. PLoS One (2013) 0.79

Cell cycle Start is coupled to entry into the yeast metabolic cycle across diverse strains and growth rates. Mol Biol Cell (2015) 0.77

Cell cycle dynamics in a response/signalling feedback system with a gap. J Biol Dyn (2014) 0.75

Noise-induced dispersion and breakup of clusters in cell cycle dynamics. J Theor Biol (2014) 0.75

Reducing hypoxia and inflammation during invasive pulmonary aspergillosis by targeting the Interleukin-1 receptor. Sci Rep (2016) 0.75

Dual-Color Monitoring Overcomes the Limitations of Single Bioluminescent Reporters in Fast-Growing Microbes and Reveals Phase-Dependent Protein Productivity during the Metabolic Rhythms of Saccharomyces cerevisiae. Appl Environ Microbiol (2015) 0.75

Articles cited by this

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell (1998) 62.20

Global analysis of protein localization in budding yeast. Nature (2003) 33.22

Resetting central and peripheral circadian oscillators in transgenic rats. Science (2000) 8.63

Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes. Science (2005) 6.95

G1-specific cyclins of S. cerevisiae: cell cycle periodicity, regulation by mating pheromone, and association with the p34CDC28 protein kinase. Cell (1990) 5.55

Circadian rhythms in prokaryotes: luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci U S A (1993) 5.08

Circadian clock mutants in Arabidopsis identified by luciferase imaging. Science (1995) 4.62

Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast. Mol Biol Cell (2007) 4.27

Modulation of firefly luciferase stability and impact on studies of gene regulation. Gene (1991) 4.21

A novel circadian phenotype based on firefly luciferase expression in transgenic plants. Plant Cell (1992) 4.10

Circadian orchestration of gene expression in cyanobacteria. Genes Dev (1995) 3.95

Circadian clock mutants of cyanobacteria. Science (1994) 3.62

A genomewide oscillation in transcription gates DNA replication and cell cycle. Proc Natl Acad Sci U S A (2004) 3.23

Destabilized green fluorescent protein for monitoring dynamic changes in yeast gene expression with flow cytometry. Yeast (2000) 2.17

Enhancer trapping reveals widespread circadian clock transcriptional control in Arabidopsis. Plant Physiol (2003) 2.00

Energetics of the budding cycle of Saccharomyces cerevisiae during glucose limited aerobic growth. Arch Mikrobiol (1969) 1.99

Fully codon-optimized luciferase uncovers novel temperature characteristics of the Neurospora clock. Eukaryot Cell (2007) 1.75

Quantitative analyses of circadian gene expression in mammalian cell cultures. PLoS Comput Biol (2006) 1.69

Novel features of drosophila period Transcription revealed by real-time luciferase reporting. Neuron (1996) 1.61

Generation and maintenance of synchrony in Saccharomyces cerevisiae continuous culture. Exp Cell Res (2003) 1.39

Oscillatory metabolism of Saccharomyces cerevisiae in continuous culture. FEMS Microbiol Lett (1992) 1.37

A potential mechanism of energy-metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae. FEBS J (2006) 1.14

Identification and purification of a factor that binds to the Mlu I cell cycle box of yeast DNA replication genes. Proc Natl Acad Sci U S A (1991) 1.13

Visualization of mPer1 transcription in vitro: NMDA induces a rapid phase shift of mPer1 gene in cultured SCN. Curr Biol (2001) 1.12

The influence of hypoxia on bioluminescence in luciferase-transfected gliosarcoma tumor cells in vitro. Photochem Photobiol Sci (2008) 1.12

The effect of oxygen upon the immobilization reaction in firefly luminescence. J Cell Physiol (1953) 1.09

Oscillations in continuous cultures of budding yeast: a segregated parameter analysis. Biotechnol Bioeng (1988) 1.07

Clock control of ultradian respiratory oscillation found during yeast continuous culture. J Bacteriol (2001) 1.01

The yeast DNA polymerase-primase complex: genes and proteins. Biochim Biophys Acta (1988) 0.90

Involvement of a cell size control mechanism in the induction and maintenance of oscillations in continuous cultures of budding yeast. Biotechnol Bioeng (1990) 0.85

Effect of the dilution rate on the mode of oscillation in continuous cultures of Saccharomyces cerevisiae. J Biotechnol (1998) 0.84

Articles by these authors

Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC. EMBO J (2003) 3.47

Fluoro-Jade C results in ultra high resolution and contrast labeling of degenerating neurons. Brain Res (2005) 2.67

Visualizing a circadian clock protein: crystal structure of KaiC and functional insights. Mol Cell (2004) 2.54

Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses. Proc Natl Acad Sci U S A (2004) 2.43

Circadian gene expression in mammalian fibroblasts revealed by real-time luminescence reporting: temperature compensation and damping. Proc Natl Acad Sci U S A (2003) 2.32

The adaptive value of circadian clocks: an experimental assessment in cyanobacteria. Curr Biol (2004) 2.21

Elucidating the ticking of an in vitro circadian clockwork. PLoS Biol (2007) 2.19

CYANOBACTERIAL CIRCADIAN RHYTHMS. Annu Rev Plant Physiol Plant Mol Biol (1997) 2.15

Cycling of CRYPTOCHROME proteins is not necessary for circadian-clock function in mammalian fibroblasts. Curr Biol (2007) 2.13

Quantitative analyses of circadian gene expression in mammalian cell cultures. PLoS Comput Biol (2006) 1.69

Circadian disruption leads to insulin resistance and obesity. Curr Biol (2013) 1.66

Non-optimal codon usage is a mechanism to achieve circadian clock conditionality. Nature (2013) 1.61

Circadian rhythms of superhelical status of DNA in cyanobacteria. Proc Natl Acad Sci U S A (2007) 1.55

Imaging protein interactions with bioluminescence resonance energy transfer (BRET) in plant and mammalian cells and tissues. Proc Natl Acad Sci U S A (2007) 1.48

The circadian clock in Chlamydomonas reinhardtii. What is it for? What is it similar to? Plant Physiol (2005) 1.44

The Arabidopsis repressor of light signaling, COP1, is regulated by nuclear exclusion: mutational analysis by bioluminescence resonance energy transfer. Proc Natl Acad Sci U S A (2004) 1.37

Circadian clock gene Bmal1 is not essential; functional replacement with its paralog, Bmal2. Curr Biol (2010) 1.34

Coupling of a core post-translational pacemaker to a slave transcription/translation feedback loop in a circadian system. PLoS Biol (2010) 1.32

Genetic differences in human circadian clock genes among worldwide populations. J Biol Rhythms (2008) 1.27

Shift work in nurses: contribution of phenotypes and genotypes to adaptation. PLoS One (2011) 1.25

Intermolecular associations determine the dynamics of the circadian KaiABC oscillator. Proc Natl Acad Sci U S A (2010) 1.24

Dark-stimulated calcium ion fluxes in the chloroplast stroma and cytosol. Plant Cell (2002) 1.17

No promoter left behind: global circadian gene expression in cyanobacteria. J Biol Rhythms (2006) 1.14

Intramolecular regulation of phosphorylation status of the circadian clock protein KaiC. PLoS One (2009) 1.12

Soluble 3',6-substituted indirubins with enhanced selectivity toward glycogen synthase kinase -3 alter circadian period. J Med Chem (2008) 1.01

Bioluminescence and chemiluminescence. Methods Enzymol (2003) 1.01

Circadian yin-yang regulation and its manipulation to globally reprogram gene expression. Curr Biol (2013) 0.98

Shift work and circadian dysregulation of reproduction. Front Endocrinol (Lausanne) (2013) 0.98

Measurement of the volume growth rate of single budding yeast with the MOSFET-based microfluidic Coulter counter. Lab Chip (2010) 0.98

Bioluminescence resonance energy transfer: monitoring protein-protein interactions in living cells. Methods Enzymol (2003) 0.95

A circadian clock nanomachine that runs without transcription or translation. Curr Opin Neurobiol (2013) 0.88

Visible light alters yeast metabolic rhythms by inhibiting respiration. Proc Natl Acad Sci U S A (2013) 0.86

ODE, RDE and SDE models of cell cycle dynamics and clustering in yeast. J Biol Dyn (2010) 0.86

Cell cycle dynamics: clustering is universal in negative feedback systems. J Math Biol (2014) 0.83

Bioluminescence resonance energy transfer (BRET) imaging in plant seedlings and mammalian cells. Methods Mol Biol (2011) 0.82

Bioluminescence resonance energy transfer assays for protein-protein interactions in living cells. Methods Mol Biol (2002) 0.82

In vivo detection of protein-protein interaction in plant cells using BRET. Methods Mol Biol (2004) 0.81

Circadian rhythms: as time glows by in bacteria. Nature (2004) 0.79

An Evolutionary Fitness Enhancement Conferred by the Circadian System in Cyanobacteria. Chaos Solitons Fractals (2013) 0.79

Luminescence as a continuous real-time reporter of promoter activity in yeast undergoing respiratory oscillations or cell division rhythms. Methods Mol Biol (2011) 0.79

pHlash: a new genetically encoded and ratiometric luminescence sensor of intracellular pH. PLoS One (2012) 0.79

Genetic variation in melatonin pathway enzymes in children with autism spectrum disorder and comorbid sleep onset delay. J Autism Dev Disord (2015) 0.79

Photoperiodic control of germination in the unicell Chlamydomonas. Naturwissenschaften (2002) 0.77

Comment on "The Arabidopsis circadian clock incorporates a cADPR-based feedback loop". Science (2009) 0.77

Animal care practices in research on biological rhythms and sleep. J Biol Rhythms (2013) 0.77

[Genetic transformation of Nicotiana tabacum L. by Agrobacterium tumefaciens carrying genes in the melatonin biosynthesis pathway and the enhancement of antioxidative capability in transgenic plants]. Sheng Wu Gong Cheng Xue Bao (2009) 0.75

Biological clocks: riding the tides. Curr Biol (2013) 0.75

Cell cycle dynamics in a response/signalling feedback system with a gap. J Biol Dyn (2014) 0.75

Woody Hastings. J Biol Rhythms (2014) 0.75