Coding region mitochondrial DNA SNPs: targeting East Asian and Native American haplogroups.

PubWeight™: 1.19‹?› | Rank: Top 10%

🔗 View Article (PMID 19083727)

Published in Forensic Sci Int Genet on November 29, 2006

Authors

V Alvarez-Iglesias1, J C Jaime, A Carracedo, A Salas

Author Affiliations

1: Unidade de Xenética, Instituto de Medicina Legal, Facultad de Medicina, Universidad de Santiago de Compostela, Santiago de Compostela 15782, Galicia, Spain.

Articles citing this

The phylogeny of the four pan-American MtDNA haplogroups: implications for evolutionary and disease studies. PLoS One (2008) 1.87

New population and phylogenetic features of the internal variation within mitochondrial DNA macro-haplogroup R0. PLoS One (2009) 1.47

Multiplex SNaPshot for detection of BRCA1/2 common mutations in Spanish and Spanish related breast/ovarian cancer families. BMC Med Genet (2007) 1.19

Rapid coastal spread of First Americans: novel insights from South America's Southern Cone mitochondrial genomes. Genome Res (2012) 1.08

Haplogrouping mitochondrial DNA sequences in Legal Medicine/Forensic Genetics. Int J Legal Med (2012) 1.06

Cuba: exploring the history of admixture and the genetic basis of pigmentation using autosomal and uniparental markers. PLoS Genet (2014) 1.02

The Etruscan timeline: a recent Anatolian connection. Eur J Hum Genet (2008) 1.01

Forensic and phylogeographic characterization of mtDNA lineages from northern Thailand (Chiang Mai). Int J Legal Med (2009) 0.98

Mitochondrial echoes of first settlement and genetic continuity in El Salvador. PLoS One (2009) 0.95

An alternative model for the early peopling of southern South America revealed by analyses of three mitochondrial DNA haplogroups. PLoS One (2012) 0.93

Multiplex genotyping system for efficient inference of matrilineal genetic ancestry with continental resolution. Investig Genet (2011) 0.92

Uniparental genetic markers in South Amerindians. Genet Mol Biol (2012) 0.92

Uniparental markers of contemporary Italian population reveals details on its pre-Roman heritage. PLoS One (2012) 0.89

The impact of modern migrations on present-day multi-ethnic Argentina as recorded on the mitochondrial DNA genome. BMC Genet (2011) 0.88

Amerindian mitochondrial DNA haplogroups predominate in the population of Argentina: towards a first nationwide forensic mitochondrial DNA sequence database. Int J Legal Med (2009) 0.87

The mtDNA composition of Uzbekistan: a microcosm of Central Asian patterns. Int J Legal Med (2010) 0.86

Arrival of Paleo-Indians to the southern cone of South America: new clues from mitogenomes. PLoS One (2012) 0.86

Development of a multiplex single base extension assay for mitochondrial DNA haplogroup typing. Croat Med J (2007) 0.85

Minisequencing mitochondrial DNA pathogenic mutations. BMC Med Genet (2008) 0.84

Population stratification in Argentina strongly influences likelihood ratio estimates in paternity testing as revealed by a simulation-based approach. Int J Legal Med (2009) 0.83

Specificity of mtDNA-directed PCR-influence of NUclear MTDNA insertion (NUMT) contamination in routine samples and techniques. Int J Legal Med (2007) 0.83

New insights into the Lake Chad Basin population structure revealed by high-throughput genotyping of mitochondrial DNA coding SNPs. PLoS One (2011) 0.82

Mitochondrial diversity in Amerindian Kichwa and Mestizo populations from Ecuador. Int J Legal Med (2011) 0.81

AmericaPlex26: a SNaPshot multiplex system for genotyping the main human mitochondrial founder lineages of the Americas. PLoS One (2014) 0.81

Genomic insights on the ethno-history of the Maya and the 'Ladinos' from Guatemala. BMC Genomics (2015) 0.79

Forensically relevant SNaPshot(®) assays for human DNA SNP analysis: a review. Int J Legal Med (2016) 0.79

The Genomic Legacy of the Transatlantic Slave Trade in the Yungas Valley of Bolivia. PLoS One (2015) 0.78

A reduced number of mtSNPs saturates mitochondrial DNA haplotype diversity of worldwide population groups. PLoS One (2010) 0.77

Multiplex APLP System for High-Resolution Haplogrouping of Extremely Degraded East-Asian Mitochondrial DNAs. PLoS One (2016) 0.76

Mitochondrial variation among the Aymara and the signatures of population expansion in the central Andes. Am J Hum Biol (2014) 0.76

Multiple Sclerosis in Latin Americans: Genetic Aspects. Curr Neurol Neurosci Rep (2017) 0.75

Phylogeographic and genome-wide investigations of Vietnam ethnic groups reveal signatures of complex historical demographic movements. Sci Rep (2017) 0.75

Articles by these authors

Association between coffee drinking and K-ras mutations in exocrine pancreatic cancer. PANKRAS II Study Group. J Epidemiol Community Health (1999) 4.43

DNA commission of the International Society of Forensic Genetics: Recommendations on the interpretation of mixtures. Forensic Sci Int (2006) 3.20

DNA recommendations. Further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems. International Society for Forensic Haemogenetics. Int J Legal Med (1997) 2.35

Incidence of collagenous and lymphocytic colitis: a 5-year population-based study. Am J Gastroenterol (1999) 2.32

DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis. Forensic Sci Int (2006) 2.22

Inferring ancestral origin using a single multiplex assay of ancestry-informative marker SNPs. Forensic Sci Int Genet (2007) 2.03

DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis. Int J Legal Med (2006) 2.00

mtDNA analysis of the Galician population: a genetic edge of European variation. Eur J Hum Genet (1998) 1.75

Visceral leishmaniasis: another HIV-associated opportunistic infection? Report of eight cases and review of the literature. AIDS (1991) 1.74

Online reference database of European Y-chromosomal short tandem repeat (STR) haplotypes. Forensic Sci Int (2001) 1.67

Myofibroblast proliferation, fibrosis, and defective pancreatic repair induced by cyclosporin in rats. Gut (1999) 1.66

COGENT (COlorectal cancer GENeTics): an international consortium to study the role of polymorphic variation on the risk of colorectal cancer. Br J Cancer (2009) 1.62

Late Crohn's disease patients present an increase in peripheral Th17 cells and cytokine production compared with early patients. Aliment Pharmacol Ther (2009) 1.62

Derangement of mucosal barrier function by bacteria colonizing the rat colonic mucosa. Eur J Clin Invest (1998) 1.60

Induction of chronic pancreatic disease by trinitrobenzene sulfonic acid infusion into rat pancreatic ducts. Pancreas (1996) 1.59

Patients with achalasia lack nitric oxide synthase in the gastro-oesophageal junction. Eur J Clin Invest (1993) 1.57

VCAM-1, but not ICAM-1 or MAdCAM-1, immunoblockade ameliorates DSS-induced colitis in mice. Lab Invest (2000) 1.54

A brief dementia screener suitable for use by non-specialists in resource poor settings--the cross-cultural derivation and validation of the brief Community Screening Instrument for Dementia. Int J Geriatr Psychiatry (2010) 1.53

Typing of mitochondrial DNA coding region SNPs of forensic and anthropological interest using SNaPshot minisequencing. Forensic Sci Int (2004) 1.52

Analysis of global variability in 15 established and 5 new European Standard Set (ESS) STRs using the CEPH human genome diversity panel. Forensic Sci Int Genet (2010) 1.48

Genetic markers: association study in migraine. Cephalalgia (1995) 1.48

Mutation rates at Y chromosome specific microsatellites. Hum Mutat (2005) 1.48

Role of intestinal microflora in chronic inflammation and ulceration of the rat colon. Gut (1994) 1.47

Paternity Testing Commission of the International Society of Forensic Genetics. Recommendations on genetic investigations in paternity cases. Int J Legal Med (2003) 1.46

Influence of dose-rate on inflammatory damage and adhesion molecule expression after abdominal radiation in the rat. Int J Radiat Oncol Biol Phys (1999) 1.46

Parosteal osteoma of the iliac bone. Skeletal Radiol (1998) 1.44

Considerations by the European DNA profiling (EDNAP) group on the working practices, nomenclature and interpretation of mitochondrial DNA profiles. Forensic Sci Int (2001) 1.43

[CD4+ lymphocytes in patients with a Leishmania-HIV coinfection]. Med Clin (Barc) (1995) 1.41

Pseudomitochondrial genome haunts disease studies. J Med Genet (2008) 1.40

[Extrabronchial small-cell carcinoma: apropos 6 cases]. Med Clin (Barc) (1993) 1.39

DNA commission of the international society for forensic genetics: guidelines for mitochondrial DNA typing. Forensic Sci Int (2000) 1.37

The R71G BRCA1 is a founder Spanish mutation and leads to aberrant splicing of the transcript. Hum Mutat (2001) 1.36

Dietary fish oil reduces progression of chronic inflammatory lesions in a rat model of granulomatous colitis. Gut (1990) 1.34

DNA commission of the International Society of Forensic Genetics: recommendations on forensic analysis using Y-chromosome STRs. Int J Legal Med (2001) 1.28

DNA Commission of the International Society for Forensic Genetics (ISFG): recommendations regarding the role of forensic genetics for disaster victim identification (DVI). Forensic Sci Int Genet (2006) 1.28

Artificial recombination in forensic mtDNA population databases. Int J Legal Med (2004) 1.24

Spectrum of gluten-sensitive enteropathy in first-degree relatives of patients with coeliac disease: clinical relevance of lymphocytic enteritis. Gut (2006) 1.22

Analysis of artificially degraded DNA using STRs and SNPs--results of a collaborative European (EDNAP) exercise. Forensic Sci Int (2005) 1.21

Treatment of visceral leishmaniasis in HIV-infected patients: a randomized trial comparing meglumine antimoniate with amphotericin B. Spanish HIV-Leishmania Study Group. AIDS (1999) 1.20

Stimulation of transforming growth factor beta1 by enteric bacteria in the pathogenesis of rat intestinal fibrosis. Gastroenterology (1998) 1.20

Kinetic and mechanical basis of rolling through an integrin and novel Ca2+-dependent rolling and Mg2+-dependent firm adhesion modalities for the alpha 4 beta 7-MAdCAM-1 interaction. Biochemistry (2001) 1.20

Incrimination of anaerobic bacteria in the induction of experimental colitis. Am J Physiol (1997) 1.20

A bidirectional corridor in the Sahel-Sudan belt and the distinctive features of the Chad Basin populations: a history revealed by the mitochondrial DNA genome. Ann Hum Genet (2007) 1.18

DNA Commission of the International Society for Forensic Genetics: guidelines for mitochondrial DNA typing. Int J Legal Med (2000) 1.18

Participation of thromboxane and other eicosanoid synthesis in the course of experimental inflammatory colitis. Gastroenterology (1990) 1.16

The recombination landscape around forensic STRs: Accurate measurement of genetic distances between syntenic STR pairs using HapMap high density SNP data. Forensic Sci Int Genet (2011) 1.13

Association of common copy number variants at the glutathione S-transferase genes and rare novel genomic changes with schizophrenia. Mol Psychiatry (2009) 1.11

Resolving relationship tests that show ambiguous STR results using autosomal SNPs as supplementary markers. Forensic Sci Int Genet (2008) 1.11

Serum concentrations of organochlorine compounds and K-ras mutations in exocrine pancreatic cancer. PANKRAS II Study Group. Lancet (2000) 1.11

Dietary inulin improves distal colitis induced by dextran sodium sulfate in the rat. Am J Gastroenterol (2001) 1.10

Hierarchical analysis of 30 Y-chromosome SNPs in European populations. Int J Legal Med (2004) 1.09

Inferring the most likely geographical origin of mtDNA sequence profiles. Ann Hum Genet (2004) 1.09

Evaluation of the Genplex SNP typing system and a 49plex forensic marker panel. Forensic Sci Int Genet (2007) 1.08

Right ventricular infarction: relationships between ST segment elevation in V4R and hemodynamic, scintigraphic, and echocardiographic findings in patients with acute inferior myocardial infarction. Am Heart J (1981) 1.06

Novel splice donor site mutation in MERTK gene associated with retinitis pigmentosa. Br J Ophthalmol (2008) 1.06

The mtDNA ancestry of admixed Colombian populations. Am J Hum Biol (2008) 1.05

DNA Commission of the International Society of Forensic Genetics: recommendations on forensic analysis using Y-chromosome STRs. Forensic Sci Int (2001) 1.04

Dexamethasone inhibition of leucocyte adhesion to rat mesenteric postcapillary venules: role of intercellular adhesion molecule 1 and KC. Gut (1999) 1.04

More evidence for non-maternal inheritance of mitochondrial DNA? J Med Genet (2005) 1.03

Role of P-selectin and ICAM-1 in pancreatitis-induced lung inflammation in rats: significance of oxidative stress. Ann Surg (1999) 1.02

Bile acid malabsorption in microscopic colitis and in previously unexplained functional chronic diarrhea. Dig Dis Sci (2001) 1.01

Does Helicobacter pylori infection increase gastric sensitivity in functional dyspepsia? Gut (1995) 1.00

Effects of steroid treatment on activation of nuclear factor kappaB in patients with inflammatory bowel disease. Br J Pharmacol (1998) 1.00

Influence of the type of pegylated interferon on the onset of depressive and neuropsychiatric symptoms in HIV-HCV coinfected patients. AIDS Care (2007) 1.00

Role of P-selectin in radiation-induced intestinal inflammatory damage. Int J Cancer (2001) 0.99

Heteroplasmy in mtDNA and the weight of evidence in forensic mtDNA analysis: a case report. Int J Legal Med (2001) 0.98

Surface hydrophobicity of the rat colonic mucosa is a defensive barrier against macromolecules and toxins. Gut (2000) 0.98

The prevalence of coeliac disease is significantly higher in children compared with adults. Aliment Pharmacol Ther (2010) 0.98

Mutation analysis of the adenomatous polyposis coli (APC) gene in northwest Spanish patients with familial adenomatous polyposis (FAP) and sporadic colorectal cancer. Hum Mutat (2001) 0.98

Forensic performance of two insertion-deletion marker assays. Int J Legal Med (2012) 0.97

A two-phase case-control study for colorectal cancer genetic susceptibility: candidate genes from chromosomal regions 9q22 and 3q22. Br J Cancer (2011) 0.97

Further development of forensic eye color predictive tests. Forensic Sci Int Genet (2012) 0.97

Mucosal colonisation with Lactobacillus casei mitigates barrier injury induced by exposure to trinitronbenzene sulphonic acid. Gut (2005) 0.97

Toxic dilatation of colon in a rat model of colitis is linked to an inducible form of nitric oxide synthase. Am J Physiol (1996) 0.97

Gender bias in the multiethnic genetic composition of central Argentina. J Hum Genet (2008) 0.96

D9S1120, a simple STR with a common Native American-specific allele: forensic optimization, locus characterization and allele frequency studies. Forensic Sci Int Genet (2008) 0.96

Induction of nitric oxide synthase in colonic smooth muscle from patients with toxic megacolon. Gastroenterology (1995) 0.95

Forensic typing of autosomal SNPs with a 29 SNP-multiplex--results of a collaborative EDNAP exercise. Forensic Sci Int Genet (2008) 0.95

Diagnostic value of duodenal antitissue transglutaminase antibodies in gluten-sensitive enteropathy. Aliment Pharmacol Ther (2008) 0.95

Stimulation of the midkine/ALK axis renders glioma cells resistant to cannabinoid antitumoral action. Cell Death Differ (2011) 0.95

Publication of population data of human polymorphisms. Forensic Sci Int (2000) 0.95

DNA recommendations 1997 of the International Society for Forensic Genetics. Vox Sang (1998) 0.95

Revision of the SNPforID 34-plex forensic ancestry test: Assay enhancements, standard reference sample genotypes and extended population studies. Forensic Sci Int Genet (2012) 0.95

Analysis of BRCA1 and BRCA2 in breast and breast/ovarian cancer families shows population substructure in the Iberian peninsula. Ann Hum Genet (2002) 0.94

Nitric oxide modulates pancreatic basal secretion and response to cerulein in the rat: effects in acute pancreatitis. Gastroenterology (1995) 0.94

Genetic data of 10 X-STRs in a Spanish population sample. Forensic Sci Int (2007) 0.93

Robustness of the Y STRs DYS19, DYS389 I and II, DYS390 and DYS393: optimization of a PCR pentaplex. Forensic Sci Int (1999) 0.93

The discoidin domain receptor 1 as a novel susceptibility gene for schizophrenia. Mol Psychiatry (2007) 0.93

Effect of oral oleoyl-estrone on adipose tissue composition in male rats. Int J Obes Relat Metab Disord (2002) 0.93

Analysis of TGM1, ALOX12B, ALOXE3, NIPAL4 and CYP4F22 in autosomal recessive congenital ichthyosis from Galicia (NW Spain): evidence of founder effects. Br J Dermatol (2011) 0.92

Selective inhibition of phosphodiesterase-4 ameliorates chronic colitis and prevents intestinal fibrosis. J Pharmacol Exp Ther (2005) 0.92

Differential role of selectins in experimental colitis. Gastroenterology (2001) 0.92

Global population variability in Qiagen Investigator HDplex STRs. Forensic Sci Int Genet (2013) 0.91

Adsorption of 241Am and 226Ra from natural water by wood charcoal. Appl Radiat Isot (2007) 0.91