Published in PLoS Comput Biol on March 20, 2009
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Computer programs and methodologies for the simulation of DNA sequence data with recombination. Front Genet (2013) 0.81
A novel computational method identifies intra- and inter-species recombination events in Staphylococcus aureus and Streptococcus pneumoniae. PLoS Comput Biol (2012) 0.80
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A unifying model of genome evolution under parsimony. BMC Bioinformatics (2014) 0.78
Evaluation of methods for detecting conversion events in gene clusters. BMC Bioinformatics (2011) 0.78
More accurate recombination prediction in HIV-1 using a robust decoding algorithm for HMMs. BMC Bioinformatics (2011) 0.77
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Flavivirus and Filovirus EvoPrinters: New alignment tools for the comparative analysis of viral evolution. PLoS Negl Trop Dis (2017) 0.75
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Identifying the important HIV-1 recombination breakpoints. PLoS Comput Biol (2008) 1.42
Identification of two HIV type 1 circulating recombinant forms in Brazil. AIDS Res Hum Retroviruses (2006) 1.27
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Sequential partially overlapping gene arrangement in the tricistronic S1 genome segments of avian reovirus and Nelson Bay reovirus: implications for translation initiation. J Virol (2002) 1.10
Accurate reconstruction of insertion-deletion histories by statistical phylogenetics. PLoS One (2012) 0.94
A radiographic study of the ossification of the posterior wall of the acetabulum: implications for the diagnosis of pediatric and adolescent hip disorders. J Bone Joint Surg Am (2013) 0.91
Estimating empirical codon hidden Markov models. Mol Biol Evol (2012) 0.85
Accurate estimation of gene evolutionary rates using XRATE, with an application to transmembrane proteins. Mol Biol Evol (2009) 0.82
Evolutionary modeling and prediction of non-coding RNAs in Drosophila. PLoS One (2009) 0.81
HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstruction. Bioinformatics (2012) 0.79
Dopamine D3 receptor antagonists: the quest for a potentially selective PET ligand. Part 3: Radiosynthesis and in vivo studies. Bioorg Med Chem Lett (2009) 0.79
Evaluating bacterial gene-finding HMM structures as probabilistic logic programs. Bioinformatics (2012) 0.78
Developing and applying heterogeneous phylogenetic models with XRate. PLoS One (2012) 0.77
Evolutionary triplet models of structured RNA. PLoS Comput Biol (2009) 0.77
xREI: a phylo-grammar visualization webserver. Nucleic Acids Res (2008) 0.75
Dopamine D(3) receptor antagonists: The quest for a potentially selective PET ligand. Part two: Lead optimization. Bioorg Med Chem Lett (2009) 0.75