Published in Environ Microbiol on March 23, 2009
A guide to the natural history of freshwater lake bacteria. Microbiol Mol Biol Rev (2011) 4.06
Broad habitat range of the phylogenetically narrow R-BT065 cluster, representing a core group of the Betaproteobacterial genus Limnohabitans. Appl Environ Microbiol (2009) 1.25
Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton. ISME J (2012) 1.21
The passive yet successful way of planktonic life: genomic and experimental analysis of the ecology of a free-living polynucleobacter population. PLoS One (2012) 1.19
Ubiquity of Polynucleobacter necessarius ssp. asymbioticus in lentic freshwater habitats of a heterogeneous 2000 km area. Environ Microbiol (2009) 1.17
In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake. ISME J (2012) 1.15
Metagenomes of Mediterranean coastal lagoons. Sci Rep (2012) 1.11
Alga-derived substrates select for distinct Betaproteobacterial lineages and contribute to niche separation in Limnohabitans strains. Appl Environ Microbiol (2011) 1.05
Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage. ISME J (2014) 1.01
The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains. PLoS One (2013) 0.98
Composition and stability of the microbial community inside the digestive tract of the aquatic crustacean Daphnia magna. Microb Ecol (2011) 0.93
Contrasting trends in distribution of four major planktonic betaproteobacterial groups along a pH gradient of epilimnia of 72 freshwater habitats. FEMS Microbiol Ecol (2012) 0.89
Patterns of Limnohabitans microdiversity across a large set of freshwater habitats as revealed by Reverse Line Blot Hybridization. PLoS One (2013) 0.88
Community shifts of actively growing lake bacteria after N-acetyl-glucosamine addition: improving the BrdU-FACS method. ISME J (2013) 0.82
Dissolved organic monomer partitioning among bacterial groups in two oligotrophic lakes. Environ Microbiol Rep (2015) 0.79
Phosphate and ATP uptake by lake bacteria: does taxonomical identity matter? Environ Microbiol (2016) 0.77
Contrasting effects of singlet oxygen and hydrogen peroxide on bacterial community composition in a humic lake. PLoS One (2014) 0.76
Mississippi River Plume Enriches Microbial Diversity in the Northern Gulf of Mexico. Front Microbiol (2016) 0.75
The first complete genome sequences of the acI lineage, the most abundant freshwater Actinobacteria, obtained by whole-genome-amplification of dilution-to-extinction cultures. Sci Rep (2017) 0.75
The Limnohabitans genus harbors generalistic and opportunistic subtypes: evidence from spatiotemporal succession in a canyon-shaped reservoir. Appl Environ Microbiol (2017) 0.75
The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. Syst Appl Microbiol (2008) 8.21
Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria. Appl Environ Microbiol (2002) 5.90
Symbiosis insights through metagenomic analysis of a microbial consortium. Nature (2006) 5.04
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota. Nature (2012) 4.42
Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation. Proc Natl Acad Sci U S A (2005) 4.15
Application of tetranucleotide frequencies for the assignment of genomic fragments. Environ Microbiol (2004) 4.12
Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science (2012) 4.11
Diversity and structure of bacterial communities in Arctic versus Antarctic pack ice. Appl Environ Microbiol (2003) 3.50
Diversity and distribution of methanotrophic archaea at cold seeps. Appl Environ Microbiol (2005) 3.45
Contribution of Archaea to total prokaryotic production in the deep Atlantic Ocean. Appl Environ Microbiol (2005) 3.13
Revising the nitrogen cycle in the Peruvian oxygen minimum zone. Proc Natl Acad Sci U S A (2009) 3.11
A global network of coexisting microbes from environmental and whole-genome sequence data. Genome Res (2010) 2.85
Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea. Proc Natl Acad Sci U S A (2007) 2.82
Insights into the genome of large sulfur bacteria revealed by analysis of single filaments. PLoS Biol (2007) 2.69
Combining catalyzed reporter deposition-fluorescence in situ hybridization and microautoradiography to detect substrate utilization by bacteria and Archaea in the deep ocean. Appl Environ Microbiol (2004) 2.64
Release LTPs104 of the All-Species Living Tree. Syst Appl Microbiol (2011) 2.46
Microbial reefs in the Black Sea fueled by anaerobic oxidation of methane. Science (2002) 2.45
Detoxification of sulphidic African shelf waters by blooming chemolithotrophs. Nature (2008) 2.37
Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds. Int J Syst Evol Microbiol (2002) 2.29
A single-cell view on the ecophysiology of anaerobic phototrophic bacteria. Proc Natl Acad Sci U S A (2008) 2.23
In situ accessibility of small-subunit rRNA of members of the domains Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes. Appl Environ Microbiol (2003) 2.15
Possible quorum sensing in marine snow bacteria: production of acylated homoserine lactones by Roseobacter strains isolated from marine snow. Appl Environ Microbiol (2002) 2.14
A conspicuous nickel protein in microbial mats that oxidize methane anaerobically. Nature (2003) 2.10
An improved protocol for quantification of freshwater Actinobacteria by fluorescence in situ hybridization. Appl Environ Microbiol (2003) 2.09
Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink. Nature (2006) 2.06
High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters. Appl Environ Microbiol (2003) 2.03
Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea. Appl Environ Microbiol (2002) 1.96
Mechanisms and rates of bacterial colonization of sinking aggregates. Appl Environ Microbiol (2002) 1.95
Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages. Environ Microbiol (2004) 1.94
Comparative sequence analysis and oligonucleotide probe design based on 23S rRNA genes of Alphaproteobacteria from North Sea bacterioplankton. Syst Appl Microbiol (2004) 1.91
Hydrogen is an energy source for hydrothermal vent symbioses. Nature (2011) 1.86
Latitudinal distribution of prokaryotic picoplankton populations in the Atlantic Ocean. Environ Microbiol (2009) 1.76
Members of a readily enriched beta-proteobacterial clade are common in surface waters of a humic lake. Appl Environ Microbiol (2003) 1.74
Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes. Appl Environ Microbiol (2003) 1.70
Abundances, identity, and growth state of actinobacteria in mountain lakes of different UV transparency. Appl Environ Microbiol (2005) 1.69
Diversity and seasonal dynamics of Actinobacteria populations in four lakes in northeastern Germany. Appl Environ Microbiol (2006) 1.69
Production of macroaggregates from dissolved exopolymeric substances (EPS) of bacterial and diatom origin. FEMS Microbiol Ecol (2005) 1.66
Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol (2010) 1.58
Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby Mud Volcano, Barents Sea. Appl Environ Microbiol (2007) 1.58
Seasonality in bacterial diversity in north-west Mediterranean coastal waters: assessment through clone libraries, fingerprinting and FISH. FEMS Microbiol Ecol (2007) 1.57
Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group. Environ Microbiol (2009) 1.53
Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis. Proc Natl Acad Sci U S A (2007) 1.51
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments. ISME J (2012) 1.51
Spatio-temporal niche separation of planktonic Betaproteobacteria in an oligo-mesotrophic lake. Environ Microbiol (2008) 1.49
Identification of DNA-synthesizing bacterial cells in coastal North Sea plankton. Appl Environ Microbiol (2002) 1.48
Flow sorting of marine bacterioplankton after fluorescence in situ hybridization. Appl Environ Microbiol (2004) 1.45
Thermophilic anaerobic oxidation of methane by marine microbial consortia. ISME J (2011) 1.44
Roseobacter and SAR11 dominate microbial glucose uptake in coastal North Sea waters. Environ Microbiol (2006) 1.43
Toward cloning of the magnetotactic metagenome: identification of magnetosome island gene clusters in uncultivated magnetotactic bacteria from different aquatic sediments. Appl Environ Microbiol (2009) 1.42
A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones. Environ Microbiol (2008) 1.42
Automated enumeration of groups of marine picoplankton after fluorescence in situ hybridization. Appl Environ Microbiol (2003) 1.42
Microheterogeneity in 16S ribosomal DNA-defined bacterial populations from a stratified planktonic environment is related to temporal changes and to ecological adaptations. Appl Environ Microbiol (2002) 1.42
Diatom-associated bacteria are required for aggregation of Thalassiosira weissflogii. ISME J (2010) 1.42
Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system. Appl Environ Microbiol (2007) 1.36
An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments. FEMS Microbiol Ecol (2004) 1.35
Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum. Proc Natl Acad Sci U S A (2010) 1.34
Simultaneous fluorescence in situ hybridization of mRNA and rRNA in environmental bacteria. Appl Environ Microbiol (2004) 1.33
Are readily culturable bacteria in coastal North Sea waters suppressed by selective grazing mortality? Appl Environ Microbiol (2003) 1.31
Blooms of single bacterial species in a coastal lagoon of the southwestern Atlantic Ocean. Appl Environ Microbiol (2006) 1.30
A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria. Syst Appl Microbiol (2011) 1.30
Diversity and vertical distribution of cultured and uncultured Deltaproteobacteria in an intertidal mud flat of the Wadden Sea. Environ Microbiol (2005) 1.29
Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean. Environ Microbiol (2011) 1.28
Rhodoferax-related pufM gene cluster dominates the aerobic anoxygenic phototrophic communities in German freshwater lakes. Environ Microbiol (2011) 1.27
Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes. ISME J (2007) 1.26
Dynamics of microbial communities on marine snow aggregates: colonization, growth, detachment, and grazing mortality of attached bacteria. Appl Environ Microbiol (2003) 1.24
Distinct flavobacterial communities in contrasting water masses of the north Atlantic Ocean. ISME J (2010) 1.24
Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade. Environ Microbiol (2010) 1.24
Incorporation of glucose under anoxic conditions by bacterioplankton from coastal North Sea surface waters. Appl Environ Microbiol (2005) 1.24
Response of Alteromonadaceae and Rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms. Environ Microbiol (2007) 1.22
Molecular and morphological characterization of the association between bacterial endosymbionts and the marine nematode Astomonema sp. from the Bahamas. Environ Microbiol (2007) 1.22
The multifaceted roles of antibiotics and antibiotic resistance in nature. Front Microbiol (2013) 1.21
Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton. ISME J (2012) 1.21
Seasonal bloom dynamics and ecophysiology of the freshwater sister clade of SAR11 bacteria 'that rule the waves' (LD12). ISME J (2011) 1.20
High local and global diversity of Flavobacteria in marine plankton. Environ Microbiol (2007) 1.20
Bacteria of the Roseobacter clade show potential for secondary metabolite production. Microb Ecol (2007) 1.20
Is the in situ accessibility of the 16S rRNA of Escherichia coli for Cy3-labeled oligonucleotide probes predicted by a three-dimensional structure model of the 30S ribosomal subunit? Appl Environ Microbiol (2003) 1.20
In situ distribution and activity of nitrifying bacteria in freshwater sediment. Environ Microbiol (2003) 1.19
Fate of heterotrophic microbes in pelagic habitats: focus on populations. Microbiol Mol Biol Rev (2005) 1.18
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. ISME J (2010) 1.17
Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments. Environ Microbiol (2012) 1.16
Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment. Environ Microbiol (2010) 1.16
In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake. ISME J (2012) 1.15
Ecophysiological differences of betaproteobacterial populations in two hydrochemically distinct compartments of a subtropical lagoon. Environ Microbiol (2008) 1.15
Phylogeny of 16S rRNA, ribulose 1,5-bisphosphate carboxylase/oxygenase, and adenosine 5'-phosphosulfate reductase genes from gamma- and alphaproteobacterial symbionts in gutless marine worms (oligochaeta) from Bermuda and the Bahamas. Appl Environ Microbiol (2006) 1.14
Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism. Stand Genomic Sci (2010) 1.14
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide. Environ Microbiol (2009) 1.14
Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes. ISME J (2012) 1.13
Growth and release of extracellular organic compounds by benthic diatoms depend on interactions with bacteria. Environ Microbiol (2011) 1.13
Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR. Environ Microbiol (2003) 1.13
Antibiotic effects of three strains of chrysophytes (Ochromonas, Poterioochromonas) on freshwater bacterial isolates. FEMS Microbiol Ecol (2009) 1.12
Biogeography and phylogeny of the NOR5/OM60 clade of Gammaproteobacteria. Syst Appl Microbiol (2009) 1.10