Published in BMC Bioinformatics on May 11, 2009
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Shock wave therapy for calcific tendinitis of the shoulder: a prospective clinical study with two-year follow-up. Am J Sports Med (2003) 1.69
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Identification of metabolic system parameters using global optimization methods. Theor Biol Med Model (2006) 1.59
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Treatment for osteonecrosis of the femoral head: comparison of extracorporeal shock waves with core decompression and bone-grafting. J Bone Joint Surg Am (2005) 1.44
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Neural-network-based parameter estimation in S-system models of biological networks. Genome Inform (2003) 1.37
Automated smoother for the numerical decoupling of dynamics models. BMC Bioinformatics (2007) 1.27
Extracorporeal shock waves promote healing of collagenase-induced Achilles tendinitis and increase TGF-beta1 and IGF-I expression. J Orthop Res (2004) 1.23
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Recruitment of mesenchymal stem cells and expression of TGF-beta 1 and VEGF in the early stage of shock wave-promoted bone regeneration of segmental defect in rats. J Orthop Res (2004) 1.22
Modulation of notch-1 signaling alleviates vascular endothelial growth factor-mediated diabetic nephropathy. Diabetes (2010) 1.21
Mesenchymal stem cells prolong composite tissue allotransplant survival in a swine model. Transplantation (2009) 1.18
Dkk-1 promotes angiogenic responses and cartilage matrix proteinase secretion in synovial fibroblasts from osteoarthritic joints. Arthritis Rheum (2012) 1.15
Collective decision making in bacterial viruses. Biophys J (2008) 1.15
Mathematical modeling of pathogenicity of Cryptococcus neoformans. Mol Syst Biol (2008) 1.14
Dexamethasone induction of keloid regression through effective suppression of VEGF expression and keloid fibroblast proliferation. J Invest Dermatol (2006) 1.14
Inference of biochemical network models in S-system using multiobjective optimization approach. Bioinformatics (2008) 1.14
Effect of sodium hyaluronate treatment on rotator cuff lesions without complete tears: a randomized, double-blind, placebo-controlled study. J Shoulder Elbow Surg (2009) 1.12
Ortholog-based protein-protein interaction prediction and its application to inter-species interactions. BMC Bioinformatics (2008) 1.12
Parameter optimization in S-system models. BMC Syst Biol (2008) 1.12
Integration of kinetic information on yeast sphingolipid metabolism in dynamical pathway models. J Theor Biol (2004) 1.11
Dickkopf-1 promotes hyperglycemia-induced accumulation of mesangial matrix and renal dysfunction. J Am Soc Nephrol (2009) 1.11
Identification of neutral biochemical network models from time series data. BMC Syst Biol (2009) 1.10
Treatment of osteonecrosis of the hip: comparison of extracorporeal shockwave with shockwave and alendronate. Arch Orthop Trauma Surg (2007) 1.09
Extracorporeal shock-wave therapy enhanced wound healing via increasing topical blood perfusion and tissue regeneration in a rat model of STZ-induced diabetes. Wound Repair Regen (2009) 1.08
A multivariate prediction model for microarray cross-hybridization. BMC Bioinformatics (2006) 1.07
Sustained Wnt/β-catenin signaling rescues high glucose induction of transforming growth factor-β1-mediated renal fibrosis. Am J Med Sci (2012) 1.07
Control of Dkk-1 ameliorates chondrocyte apoptosis, cartilage destruction, and subchondral bone deterioration in osteoarthritic knees. Arthritis Rheum (2010) 1.06
Long-term results of extracorporeal shockwave treatment for plantar fasciitis. Am J Sports Med (2006) 1.06
An automated procedure for the extraction of metabolic network information from time series data. J Bioinform Comput Biol (2006) 1.06
Yeast sphingolipid metabolism: clues and connections. Biochem Cell Biol (2004) 1.05
Integrative analysis of transgenic alfalfa (Medicago sativa L.) suggests new metabolic control mechanisms for monolignol biosynthesis. PLoS Comput Biol (2011) 1.02
Complex coordination of multi-scale cellular responses to environmental stress. Mol Biosyst (2010) 1.02
Shock wave treatment induces angiogenesis and mobilizes endogenous CD31/CD34-positive endothelial cells in a hindlimb ischemia model: implications for angiogenesis and vasculogenesis. J Thorac Cardiovasc Surg (2013) 1.01
Shock wave treatment shows dose-dependent enhancement of bone mass and bone strength after fracture of the femur. Bone (2004) 1.00
Optimization of biotechnological systems through geometric programming. Theor Biol Med Model (2007) 1.00
Estimation of dynamic flux profiles from metabolic time series data. BMC Syst Biol (2012) 1.00
Superoxide destabilization of beta-catenin augments apoptosis of high-glucose-stressed mesangial cells. Endocrinology (2008) 0.97
Computational systems analysis of dopamine metabolism. PLoS One (2008) 0.96
A quantitative model of the generation of N(epsilon)-(carboxymethyl)lysine in the Maillard reaction between collagen and glucose. Biochem J (2003) 0.96
Controllability of non-linear biochemical systems. Math Biosci (2005) 0.95
Constructing stochastic models from deterministic process equations by propensity adjustment. BMC Syst Biol (2011) 0.95
Targeted methylation of CMV and E1A viral promoters. Biochem Biophys Res Commun (2010) 0.94
Navigation-assisted total knee arthroplasty for a knee with malunion of the distal femur. J Arthroplasty (2008) 0.93
Probabilistic risk assessment of reproductive effects of polychlorinated biphenyls on bottlenose dolphins (Tursiops truncatus) from the Southeast United States Coast. Environ Toxicol Chem (2002) 0.92
POINeT: protein interactome with sub-network analysis and hub prioritization. BMC Bioinformatics (2009) 0.92
Suppressed TGF-beta1 expression is correlated with up-regulation of matrix metalloproteinase-13 in keloid regression after flashlamp pulsed-dye laser treatment. Lasers Surg Med (2005) 0.91
Shockwaves enhance the osteogenetic gene expression in marrow stromal cells from hips with osteonecrosis. Chang Gung Med J (2011) 0.91
MicroRNA-29a protects against acute liver injury in a mouse model of obstructive jaundice via inhibition of the extrinsic apoptosis pathway. Apoptosis (2014) 0.91
Increased Dickkopf-1 expression accelerates bone cell apoptosis in femoral head osteonecrosis. Bone (2009) 0.90
Systems biology and its potential role in radiobiology. Radiat Environ Biophys (2007) 0.90
VEGF modulates angiogenesis and osteogenesis in shockwave-promoted fracture healing in rabbits. J Surg Res (2010) 0.90
Comparative serum proteome expression of osteonecrosis of the femoral head in adults. Bone (2008) 0.90
Biological effects of extracorporeal shockwave in bone healing: a study in rabbits. Arch Orthop Trauma Surg (2008) 0.90
Woodward procedure improves shoulder function in Sprengel deformity. Chang Gung Med J (2011) 0.89
Activation of ERK and p38 kinase mediated keloid fibroblast apoptosis after flashlamp pulsed-dye laser treatment. Lasers Surg Med (2005) 0.89
Yield optimization of regulated metabolic systems using deterministic branch-and-reduce methods. Biotechnol Bioeng (2008) 0.89
The effects of shockwave on bone healing and systemic concentrations of nitric oxide (NO), TGF-beta1, VEGF and BMP-2 in long bone non-unions. Nitric Oxide (2009) 0.88
Extracorporeal shockwave treatment of osteonecrosis of the femoral head in systemic lupus erythematosis. J Arthroplasty (2006) 0.88
Computation and analysis of time-dependent sensitivities in Generalized Mass Action systems. J Theor Biol (2005) 0.88
Functional analysis of metabolic channeling and regulation in lignin biosynthesis: a computational approach. PLoS Comput Biol (2012) 0.87
Coordination of the dynamics of yeast sphingolipid metabolism during the diauxic shift. Theor Biol Med Model (2007) 0.87
Extracorporeal shock wave accelerates consolidation in distraction osteogenesis of the rat mandible. J Trauma (2010) 0.87
Extracorporeal shockwave therapy shows chondroprotective effects in osteoarthritic rat knee. Arch Orthop Trauma Surg (2011) 0.87
The effect of shock wave treatment at the tendon-bone interface-an histomorphological and biomechanical study in rabbits. J Orthop Res (2005) 0.87
Extracorporeal shock wave enhanced extended skin flap tissue survival via increase of topical blood perfusion and associated with suppression of tissue pro-inflammation. J Surg Res (2007) 0.86
Functional outcomes of bilateral hip necrosis: total hip arthroplasty versus extracorporeal shockwave. Arch Orthop Trauma Surg (2009) 0.86
Increased IL-1beta expression and myofibroblast recruitment in subacromial bursa is associated with rotator cuff lesions with shoulder stiffness. J Orthop Res (2008) 0.86
Activation of extracellular signal-regulated kinase (ERK) and p38 kinase in shock wave-promoted bone formation of segmental defect in rats. Bone (2004) 0.86
Pertussis toxin-sensitive Galphai protein and ERK-dependent pathways mediate ultrasound promotion of osteogenic transcription in human osteoblasts. FEBS Lett (2003) 0.86
Extracorporeal shockwave treatment for chronic diabetic foot ulcers. J Surg Res (2008) 0.85
Shock wave application enhances pertussis toxin protein-sensitive bone formation of segmental femoral defect in rats. J Bone Miner Res (2003) 0.85
Aminoguanidine alleviates radiation-induced small-bowel damage through its antioxidant effect. Int J Radiat Oncol Biol Phys (2009) 0.84
Bone marrow-derived mesenchymal stem cells enhanced diabetic wound healing through recruitment of tissue regeneration in a rat model of streptozotocin-induced diabetes. Plast Reconstr Surg (2011) 0.84
Coordination of rapid sphingolipid responses to heat stress in yeast. PLoS Comput Biol (2013) 0.84
Flashlamp pulsed-dye laser suppressed TGF-beta1 expression and proliferation in cultured keloid fibroblasts is mediated by MAPK pathway. Lasers Surg Med (2007) 0.84
Mathematical modeling and validation of the ergosterol pathway in Saccharomyces cerevisiae. PLoS One (2011) 0.84
Flashlamp pulsed dye laser (PDL) suppression of keloid proliferation through down-regulation of TGF-beta1 expression and extracellular matrix expression. Lasers Surg Med (2004) 0.83
Rotator cuff lesions with shoulder stiffness: updated pathomechanisms and management. Chang Gung Med J (2011) 0.83
Extracorporeal shock wave treatment modulates skin fibroblast recruitment and leukocyte infiltration for enhancing extended skin-flap survival. Wound Repair Regen (2009) 0.83
Biochemical pathway modeling tools for drug target detection in cancer and other complex diseases. Methods Enzymol (2011) 0.83
The potential for signal integration and processing in interacting MAP kinase cascades. J Theor Biol (2007) 0.83
The internal state of medium spiny neurons varies in response to different input signals. BMC Syst Biol (2010) 0.83
Metabolic and transcriptional analysis of acid stress in Lactococcus lactis, with a focus on the kinetics of lactic acid pools. PLoS One (2013) 0.83
Improved methods for the mathematically controlled comparison of biochemical systems. Theor Biol Med Model (2004) 0.83
Computational analysis of determinants of dopamine (DA) dysfunction in DA nerve terminals. Synapse (2009) 0.83
Extracorporeal shockwave therapy shows a number of treatment related chondroprotective effect in osteoarthritis of the knee in rats. BMC Musculoskelet Disord (2013) 0.83
Mathematical modeling of monolignol biosynthesis in Populus xylem. Math Biosci (2010) 0.82
Biological systems modeling and analysis: a biomolecular technique of the twenty-first century. J Biomol Tech (2006) 0.82
MicroRNA-29a ameliorates glucocorticoid-induced suppression of osteoblast differentiation by regulating β-catenin acetylation. Bone (2013) 0.82
Parameter estimation in modulated, unbranched reaction chains within biochemical systems. Comput Biol Chem (2005) 0.82
Cannabinoid receptor 1 regulates ERK and GSK-3β-dependent glucocorticoid inhibition of osteoblast differentiation in murine MC3T3-E1 cells. Bone (2011) 0.81
Inferring a transcriptional regulatory network of the cytokinesis-related genes by network component analysis. BMC Syst Biol (2009) 0.81
A guide to biochemical systems modeling of sphingolipids for the biochemist. Methods Enzymol (2007) 0.81