Published in Appl Environ Microbiol on August 07, 2009
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Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments. BMC Microbiol (2014) 0.84
Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity. Microb Ecol (2015) 0.83
Cryptic infection of a broad taxonomic and geographic diversity of tadpoles by Perkinsea protists. Proc Natl Acad Sci U S A (2015) 0.78
Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France). Front Microbiol (2016) 0.77
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The molecular ecology of microbial eukaryotes unveils a hidden world. Trends Microbiol (2002) 3.32
Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene. FEMS Microbiol Ecol (2004) 2.88
Application of denaturing gradient gel electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques. Appl Environ Microbiol (2001) 2.36
Detritus-dependent development of the microbial community in an experimental system: qualitative analysis by denaturing gradient gel electrophoresis. Appl Environ Microbiol (1999) 2.18
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Phylogeny and classification of phylum Cercozoa (Protozoa). Protist (2003) 1.67
Unveiling the organisms behind novel eukaryotic ribosomal DNA sequences from the ocean. Appl Environ Microbiol (2002) 1.66
Oligonucleotide probes for the identification of three algal groups by dot blot and fluorescent whole-cell hybridization. J Eukaryot Microbiol (2000) 1.63
The extent of protist diversity: insights from molecular ecology of freshwater eukaryotes. Proc Biol Sci (2005) 1.55
High diversity of the 'Spumella-like' flagellates: an investigation based on the SSU rRNA gene sequences of isolates from habitats located in six different geographic regions. Environ Microbiol (2005) 1.49
The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages. Environ Microbiol (2005) 1.44
Parasites and phytoplankton, with special emphasis on dinoflagellate infections. J Eukaryot Microbiol (2004) 1.41
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The molecular diversity of freshwater picoeukaryotes reveals high occurrence of putative parasitoids in the plankton. PLoS One (2008) 1.38
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Unveiling fungal zooflagellates as members of freshwater picoeukaryotes: evidence from a molecular diversity study in a deep meromictic lake. Environ Microbiol (2007) 1.18
Plankton diversity in the Bay of Fundy as measured by morphological and molecular methods. Microb Ecol (2004) 1.15
Succession and regulation factors of small eukaryote community composition in a lacustrine ecosystem (Lake Pavin). Appl Environ Microbiol (2006) 1.07
Unexpected importance of potential parasites in the composition of the freshwater small-eukaryote community. Appl Environ Microbiol (2008) 1.05
Are hydrothermal vents oases for parasitic protists? Trends Parasitol (2003) 1.01
Microbial community structure and dynamics in the largest natural French lake (Lake Bourget). Microb Ecol (2006) 0.95
Weak Coupling between Heterotrophic Nanoflagellates and Bacteria in a Eutrophic Freshwater Environment. Microb Ecol (2001) 0.95
Taxon-specific and seasonal variations in flagellates grazing on heterotrophic bacteria in the oligotrophic Lake Annecy - importance of mixotrophy. FEMS Microbiol Ecol (2003) 0.94
Community composition of lacustrine small eukaryotes in hyper-eutrophic conditions in relation to top-down and bottom-up factors. FEMS Microbiol Ecol (2007) 0.86
Abundance and biomass of heterotrophic flagellates, and factors controlling their abundance and distribution in sediments of Botany Bay. Microb Ecol (2002) 0.85
Perkinsus marinus in pleasure oyster Crassostrea corteziensis from Nayarit, Pacific coast of México. J Invertebr Pathol (2008) 0.82
Fine structure of clonally propagated in vitro life stages of a Perkinsus sp. isolated from the Baltic clam Macoma balthica. J Eukaryot Microbiol (2001) 0.82
Phylogenetic position of Cryothecomonas inferred from nuclear-encoded small subunit ribosomal RNA. Protist (2000) 0.79
Metavir: a web server dedicated to virome analysis. Bioinformatics (2011) 1.47
Assessing the diversity and specificity of two freshwater viral communities through metagenomics. PLoS One (2012) 1.44
Genetic diversity of small eukaryotes in lakes differing by their trophic status. Appl Environ Microbiol (2005) 1.39
Metavir 2: new tools for viral metagenome comparison and assembled virome analysis. BMC Bioinformatics (2014) 1.32
Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters. Proc Natl Acad Sci U S A (2013) 1.23
Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads. PLoS One (2012) 1.14
Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: microcosm experiments. FEMS Microbiol Ecol (2005) 1.12
Succession of bacterial community composition over two consecutive years in two aquatic systems: a natural lake and a lake-reservoir. FEMS Microbiol Ecol (2006) 1.12
Plastid 16S rRNA gene diversity among eukaryotic picophytoplankton sorted by flow cytometry from the South Pacific Ocean. PLoS One (2011) 1.12
Succession and regulation factors of small eukaryote community composition in a lacustrine ecosystem (Lake Pavin). Appl Environ Microbiol (2006) 1.07
Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems. Environ Microbiol (2009) 1.05
Unexpected importance of potential parasites in the composition of the freshwater small-eukaryote community. Appl Environ Microbiol (2008) 1.05
Anaerobic microbial communities in Lake Pavin, a unique meromictic lake in France. Appl Environ Microbiol (2005) 1.04
Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity. PLoS One (2013) 0.99
In situ interactions between photosynthetic picoeukaryotes and bacterioplankton in the Atlantic Ocean: evidence for mixotrophy. Environ Microbiol Rep (2013) 0.98
Metagenomes of the picoalga Bathycoccus from the Chile coastal upwelling. PLoS One (2012) 0.98
Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences. Open Biol (2013) 0.96
Bacterial communities associated with Microcystis colonies differ from free-living communities living in the same ecosystem. Environ Microbiol Rep (2013) 0.93
The need for ecological monitoring of freshwaters in a changing world: a case study of Lakes Annecy, Bourget, and Geneva. Environ Monit Assess (2014) 0.93
Comparison of 16S rRNA and protein-coding genes as molecular markers for assessing microbial diversity (Bacteria and Archaea) in ecosystems. FEMS Microbiol Ecol (2011) 0.92
Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes. Environ Microbiol (2013) 0.91
Ecological traits of planktonic viruses and prokaryotes along a full-salinity gradient. FEMS Microbiol Ecol (2011) 0.90
A global perspective on marine photosynthetic picoeukaryote community structure. ISME J (2013) 0.90
Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems. Res Microbiol (2013) 0.88
Community composition and activity of prokaryotes associated to detrital particles in two contrasting lake ecosystems. FEMS Microbiol Ecol (2006) 0.87
Vertical structure of small eukaryotes in three lakes that differ by their trophic status: a quantitative approach. ISME J (2010) 0.87
Community composition of lacustrine small eukaryotes in hyper-eutrophic conditions in relation to top-down and bottom-up factors. FEMS Microbiol Ecol (2007) 0.86
Diversity and dynamics of free-living and particle-associated Betaproteobacteria and Actinobacteria in relation to phytoplankton and zooplankton communities. FEMS Microbiol Ecol (2011) 0.86
A 2-year assessment of the main environmental factors driving the free-living bacterial community structure in Lake Bourget (France). Microb Ecol (2010) 0.85
Are cyanobacterial blooms trophic dead ends? Oecologia (2012) 0.85
Effect of grazers and viruses on bacterial community structure and production in two contrasting trophic lakes. BMC Microbiol (2011) 0.84
Acceleration of cyanobacterial dominance in north temperate-subarctic lakes during the Anthropocene. Ecol Lett (2015) 0.82
Temporal dynamics and phylogenetic diversity of free-living and particle-associated Verrucomicrobia communities in relation to environmental variables in a mesotrophic lake. FEMS Microbiol Ecol (2012) 0.82
Technical challenges in metatranscriptomic studies applied to the bacterial communities of freshwater ecosystems. Genetica (2014) 0.81
Effects of viruses and predators on prokaryotic community composition. Microb Ecol (2005) 0.81
Impact of environmental factors on couplings between bacterial community composition and ectoenzymatic activities in a lacustrine ecosystem. FEMS Microbiol Ecol (2009) 0.81
Temporal dynamics of active Archaea in oxygen-depleted zones of two deep lakes. Environ Microbiol Rep (2015) 0.79
Quantitative PCR enumeration of total/toxic Planktothrix rubescens and total cyanobacteria in preserved DNA isolated from lake sediments. Appl Environ Microbiol (2011) 0.79
Trophic transfer of microcystins through the lake pelagic food web: evidence for the role of zooplankton as a vector in fish contamination. Sci Total Environ (2013) 0.78
Evidence for an active rare biosphere within freshwater protists community. Mol Ecol (2015) 0.78
Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea. Microb Ecol (2015) 0.77
Short-term uptake of microcystin-LR by Coregonus lavaretus: GST activity and genotoxicity. Ecotoxicology (2012) 0.77
Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems. FEMS Microbiol Ecol (2013) 0.77
Impact of toxic cyanobacterial blooms on Eurasian perch (Perca fluviatilis): experimental study and in situ observations in a peri-alpine lake. PLoS One (2012) 0.75
Short-term responses of unicellular planktonic eukaryotes to increases in temperature and UVB radiation. BMC Microbiol (2012) 0.75
Correction: Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus. PLoS One (2016) 0.75
Incorporation of 3H-thymidine by different prokaryotic groups in relation to temperature and nutrients in a lacustrine ecosystem. Microb Ecol (2006) 0.75
A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole. FEMS Microbiol Ecol (2014) 0.75