Evaluation of protein pattern changes in roots and leaves of Zea mays plants in response to nitrate availability by two-dimensional gel electrophoresis analysis.

PubWeight™: 1.04‹?› | Rank: Top 15%

🔗 View Article (PMC 2744680)

Published in BMC Plant Biol on August 23, 2009

Authors

Bhakti Prinsi1, Alfredo S Negri, Paolo Pesaresi, Maurizio Cocucci, Luca Espen

Author Affiliations

1: Dipartimento di Produzione Vegetale, University of Milan, I-20133 Milano, Italy. bhakti.prinsi@unimi.it

Articles citing this

A holistic view of nitrogen acquisition in plants. J Exp Bot (2011) 1.11

Assembly and sorting of the tonoplast potassium channel AtTPK1 and its turnover by internalization into the vacuole. Plant Physiol (2011) 0.93

Reciprocal control of anaplerotic phosphoenolpyruvate carboxylase by in vivo monoubiquitination and phosphorylation in developing proteoid roots of phosphate-deficient harsh hakea. Plant Physiol (2013) 0.90

Proteomic characterization of iron deficiency responses in Cucumis sativus L. roots. BMC Plant Biol (2010) 0.90

Nitrate sensing by the maize root apex transition zone: a merged transcriptomic and proteomic survey. J Exp Bot (2015) 0.87

"Omics" of maize stress response for sustainable food production: opportunities and challenges. OMICS (2014) 0.85

Mineral nitrogen sources differently affect root glutamine synthetase isoforms and amino acid balance among organs in maize. BMC Plant Biol (2015) 0.84

Short-term chromium-stress-induced alterations in the maize leaf proteome. Int J Mol Sci (2013) 0.83

Systems Biology for Smart Crops and Agricultural Innovation: Filling the Gaps between Genotype and Phenotype for Complex Traits Linked with Robust Agricultural Productivity and Sustainability. OMICS (2015) 0.83

Proteins involved in biotic and abiotic stress responses as the most significant biomarkers in the ripening of Pinot Noir skins. Funct Integr Genomics (2011) 0.83

An engineered pathway for glyoxylate metabolism in tobacco plants aimed to avoid the release of ammonia in photorespiration. BMC Biotechnol (2011) 0.82

Nitrate signals determine the sensing of nitrogen through differential expression of genes involved in nitrogen uptake and assimilation in finger millet. Funct Integr Genomics (2013) 0.81

Genetic diversity in tef [Eragrostis tef (Zucc.) Trotter]. Front Plant Sci (2015) 0.81

Comparative proteome analysis of the response of ramie under N, P and K deficiency. Planta (2014) 0.80

Nitrogen-Deficiency Stress Induces Protein Expression Differentially in Low-N Tolerant and Low-N Sensitive Maize Genotypes. Front Plant Sci (2016) 0.80

Comparative proteomics of root plasma membrane proteins reveals the involvement of calcium signalling in NaCl-facilitated nitrate uptake in Salicornia europaea. J Exp Bot (2015) 0.80

Physiological and comparative proteomic analysis reveals different drought responses in roots and leaves of drought-tolerant wild wheat (Triticum boeoticum). PLoS One (2015) 0.79

An integrated "omics" approach to the characterization of maize (Zea mays L.) mutants deficient in the expression of two genes encoding cytosolic glutamine synthetase. BMC Genomics (2014) 0.79

Proteomic characterization of the Rph15 barley resistance gene-mediated defence responses to leaf rust. BMC Genomics (2012) 0.77

Integration of Hormonal and Nutritional Cues Orchestrates Progressive Corolla Opening. Plant Physiol (2016) 0.76

MADS-box transcription factor OsMADS25 regulates root development through affection of nitrate accumulation in rice. PLoS One (2015) 0.76

Nitric Oxide-Mediated Maize Root Apex Responses to Nitrate are Regulated by Auxin and Strigolactones. Front Plant Sci (2016) 0.75

Carbon dioxide assimilation and photosynthetic electron transport of tea leaves under nitrogen deficiency. Bot Stud (2016) 0.75

Articles cited by this

Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (1970) 1528.65

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J Am Soc Mass Spectrom (1994) 45.51

A modified ninhydrin reagent for the photometric determination of amino acids and related compounds. J Biol Chem (1954) 23.09

Photoperoxidation in isolated chloroplasts. I. Kinetics and stoichiometry of fatty acid peroxidation. Arch Biochem Biophys (1968) 9.96

Improved staining of proteins in polyacrylamide gels including isoelectric focusing gels with clear background at nanogram sensitivity using Coomassie Brilliant Blue G-250 and R-250. Electrophoresis (1988) 9.38

Solubilization of plant membrane proteins for analysis by two-dimensional gel electrophoresis. Plant Physiol (1986) 6.42

Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol (2004) 4.99

Nitrate: nutrient and signal for plant growth. Plant Cell (1995) 4.14

Genomic analysis of a nutrient response in Arabidopsis reveals diverse expression patterns and novel metabolic and potential regulatory genes induced by nitrate. Plant Cell (2000) 3.43

Nitrate regulation of metabolism and growth. Curr Opin Plant Biol (1999) 3.29

Sink regulation of photosynthesis. J Exp Bot (2001) 2.93

PLANT PLASMA MEMBRANE H+-ATPases: Powerhouses for Nutrient Uptake. Annu Rev Plant Physiol Plant Mol Biol (2001) 2.91

Steps towards an integrated view of nitrogen metabolism. J Exp Bot (2002) 2.84

Nitric oxide: the versatility of an extensive signal molecule. Annu Rev Plant Biol (2003) 2.79

MaizeGDB, the community database for maize genetics and genomics. Nucleic Acids Res (2004) 2.76

Local and long-range signaling pathways regulating plant responses to nitrate. Annu Rev Plant Biol (2002) 2.63

Proteomics: the first decade and beyond. Nat Genet (2003) 2.17

Regulation of nitric oxide (NO) production by plant nitrate reductase in vivo and in vitro. J Exp Bot (2002) 2.10

Cloning and functional characterization of an Arabidopsis nitrate transporter gene that encodes a constitutive component of low-affinity uptake. Plant Cell (1999) 2.08

Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize. Plant Physiol (2001) 2.01

Extra- and Intracellular pH and Membrane Potential Changes Induced by K, Cl, H(2)PO(4), and NO(3) Uptake and Fusicoccin in Root Hairs of Limnobium stoloniferum. Plant Physiol (1990) 1.91

Evidence for cotransport of nitrate and protons in maize roots : I. Effects of nitrate on the membrane potential. Plant Physiol (1990) 1.86

Nitrate-induced genes in tomato roots. Array analysis reveals novel genes that may play a role in nitrogen nutrition. Plant Physiol (2001) 1.86

A simple, rapid and quantitative method for preparing Arabidopsis protein extracts for immunoblot analysis. Plant J (1999) 1.73

Functional differentiation of bundle sheath and mesophyll maize chloroplasts determined by comparative proteomics. Plant Cell (2005) 1.73

Getting more from less: algorithms for rapid protein identification with multiple short peptide sequences. Mol Cell Proteomics (2002) 1.70

Single-cell C(4) photosynthesis versus the dual-cell (Kranz) paradigm. Annu Rev Plant Biol (2004) 1.65

Phosphoenolpyruvate carboxylase: a new era of structural biology. Annu Rev Plant Biol (2004) 1.57

14-3-3 proteins associate with the regulatory phosphorylation site of spinach leaf nitrate reductase in an isoform-specific manner and reduce dephosphorylation of Ser-543 by endogenous protein phosphatases. FEBS Lett (1996) 1.41

Formation and possible roles of nitric oxide in plant roots. J Exp Bot (2005) 1.38

NO3- transport across the plasma membrane of Arabidopsis thaliana root hairs: kinetic control by pH and membrane voltage. J Membr Biol (1995) 1.36

Regulation of secondary metabolism by the carbon-nitrogen status in tobacco: nitrate inhibits large sectors of phenylpropanoid metabolism. Plant J (2006) 1.35

Nitrate, NO and haemoglobin in plant adaptation to hypoxia: an alternative to classic fermentation pathways. J Exp Bot (2004) 1.33

Differential expression of six glutamine synthetase genes in Zea mays. Plant Mol Biol (1993) 1.30

Plant proteomics update (2007-2008): Second-generation proteomic techniques, an appropriate experimental design, and data analysis to fulfill MIAPE standards, increase plant proteome coverage and expand biological knowledge. J Proteomics (2009) 1.26

Nitrogen deficiency in Arabidopsis affects galactolipid composition and gene expression and results in accumulation of fatty acid phytyl esters. Plant J (2007) 1.25

Overexpression of nitrate reductase in tobacco delays drought-induced decreases in nitrate reductase activity and mRNA Plant Physiol (1998) 1.25

PsbP protein, but not PsbQ protein, is essential for the regulation and stabilization of photosystem II in higher plants. Plant Physiol (2005) 1.23

Roots, nitrogen transformations, and ecosystem services. Annu Rev Plant Biol (2008) 1.21

Structure and function of plant aspartic proteinases. Eur J Biochem (2004) 1.19

Characterization and expression of transcripts induced by oxygen deprivation in maize (Zea mays L.). Plant Physiol (1994) 1.18

Nitrate transport in plants: which gene and which control? J Exp Bot (2002) 1.17

Regulatory monoubiquitination of phosphoenolpyruvate carboxylase in germinating castor oil seeds. J Biol Chem (2008) 1.17

Transcriptomic and proteomic analyses of pericycle cells of the maize primary root. Plant Physiol (2007) 1.17

Regulation of the Accumulation and Reduction of Nitrate by Nitrogen and Carbon Metabolites in Maize Seedlings. Plant Physiol (1997) 1.15

Localization of 14-3-3 proteins in the nuclei of arabidopsis and maize. Plant J (1997) 1.13

Energization of transport processes in plants. roles of the plasma membrane H+-ATPase. Plant Physiol (2004) 1.09

Combined 2D electrophoretic approaches for the study of white lupin mature seed storage proteome. Phytochemistry (2007) 1.04

Digalactosyldiacylglycerol is required for stabilization of the oxygen-evolving complex in photosystem II. Plant Physiol (2007) 1.01

Duplicate maize 13-lipoxygenase genes are differentially regulated by circadian rhythm, cold stress, wounding, pathogen infection, and hormonal treatments. J Exp Bot (2006) 1.01

The proteome of maize leaves: use of gene sequences and expressed sequence tag data for identification of proteins with peptide mass fingerprints. Electrophoresis (2001) 0.99

Nitric oxide scavenging by barley hemoglobin is facilitated by a monodehydroascorbate reductase-mediated ascorbate reduction of methemoglobin. Planta (2005) 0.99

Immunological analysis of the phosphorylation state of maize C4-form phosphoenolpyruvate carboxylase with specific antibodies raised against a synthetic phosphorylated peptide. Plant J (2000) 0.99

Two genes encoding GF14 (14-3-3) proteins in Zea mays. Structure, expression, and potential regulation by the G-box binding complex. Plant Physiol (1994) 0.98

Regulatory 14-3-3 protein-protein interactions in plant cells. Curr Opin Plant Biol (2000) 0.98

Modulation of thiamine metabolism in Zea mays seedlings under conditions of abiotic stress. J Exp Bot (2008) 0.98

Nitric oxide is involved in nitrate-induced inhibition of root elongation in Zea mays. Ann Bot (2007) 0.97

Reconstitution of higher plant chloroplast chaperonin 60 tetradecamers active in protein folding. J Biol Chem (2000) 0.96

Specific binding of a 14-3-3 protein to autophosphorylated WPK4, an SNF1-related wheat protein kinase, and to WPK4-phosphorylated nitrate reductase. J Biol Chem (2000) 0.94

Expression, assembly and auxiliary functions of photosystem II oxygen-evolving proteins in higher plants. Photosynth Res (2007) 0.93

Rice aspartic proteinase, oryzasin, expressed during seed ripening and germination, has a gene organization distinct from those of animal and microbial aspartic proteinases. Eur J Biochem (1995) 0.93

Advances in proteomic technologies. Annu Rev Biomed Eng (2002) 0.92

Induction of nitrate uptake in maize roots: expression of a putative high-affinity nitrate transporter and plasma membrane H+-ATPase isoforms. J Exp Bot (2003) 0.91

Nucleotide sequence of cDNA encoding the precursor of the 23 kDa protein of the photosynthetic oxygen-evolving complex from wheat. Plant Mol Biol (1991) 0.90

Differential protein expression assessed by two-dimensional gel electrophoresis for two wheat varieties grown at four nitrogen levels. Proteomics (2004) 0.89

Appearance of Novel Glucose-6-Phosphate Dehydrogenase Isoforms in Chlamydomonas reinhardtii during Growth on Nitrate. Plant Physiol (1996) 0.85

All three acyl moieties of trilinolein are efficiently oxygenated by recombinant His-tagged lipid body lipoxygenase in vitro. FEBS Lett (1998) 0.85

Proteomics and a future generation of plant molecular biologists. Plant Mol Biol (2002) 0.84

Stress-induced changes in protease composition are determined by nitrogen supply in non-nodulating white clover. J Exp Bot (2005) 0.77

Effect of NO3- transport and reduction on intracellular pH: an in vivo NMR study in maize roots. J Exp Bot (2004) 0.77

Characterization of a cDNA clone encoding 23 kDa polypeptide of the oxygen-evolving complex of photosystem II in rice. Plant Cell Physiol (1995) 0.76

Analysis of the plant proteome. Curr Opin Biotechnol (2001) 0.76

Articles by these authors

The protein kinase Pstol1 from traditional rice confers tolerance of phosphorus deficiency. Nature (2012) 2.57

Photosystem II core phosphorylation and photosynthetic acclimation require two different protein kinases. Nature (2005) 2.35

A complex containing PGRL1 and PGR5 is involved in the switch between linear and cyclic electron flow in Arabidopsis. Cell (2008) 2.10

The metal ion transporter IRT1 is necessary for iron homeostasis and efficient photosynthesis in Arabidopsis thaliana. Plant J (2002) 1.76

SPL8, an SBP-box gene that affects pollen sac development in Arabidopsis. Plant Cell (2003) 1.62

Role of plastid protein phosphatase TAP38 in LHCII dephosphorylation and thylakoid electron flow. PLoS Biol (2010) 1.60

PGRL1 is the elusive ferredoxin-plastoquinone reductase in photosynthetic cyclic electron flow. Mol Cell (2013) 1.27

Mutants for photosystem I subunit D of Arabidopsis thaliana: effects on photosynthesis, photosystem I stability and expression of nuclear genes for chloroplast functions. Plant J (2004) 1.23

Plastocyanin is indispensable for photosynthetic electron flow in Arabidopsis thaliana. J Biol Chem (2003) 1.22

Proteome changes in the skin of the grape cultivar Barbera among different stages of ripening. BMC Genomics (2008) 1.14

Cadmium-induced sulfate uptake in maize roots. Plant Physiol (2002) 1.10

Iron deficiency differently affects metabolic responses in soybean roots. J Exp Bot (2007) 1.07

Combined 2D electrophoretic approaches for the study of white lupin mature seed storage proteome. Phytochemistry (2007) 1.04

Proteomic analysis of somatic embryogenesis in Vitis vinifera. Plant Cell Rep (2007) 1.03

Plasma membrane H-ATPase-dependent citrate exudation from cluster roots of phosphate-deficient white lupin. Plant Cell Environ (2009) 1.00

Morphological and proteomic responses of Eruca sativa exposed to silver nanoparticles or silver nitrate. PLoS One (2013) 0.99

Glutathione S-transferases in Festuca arundinacea: identification, characterization and inducibility by safener benoxacor. Phytochemistry (2007) 0.98

Knock-out of the genes coding for the Rieske protein and the ATP-synthase delta-subunit of Arabidopsis. Effects on photosynthesis, thylakoid protein composition, and nuclear chloroplast gene expression. Plant Physiol (2003) 0.95

Versatile roles of Arabidopsis plastid ribosomal proteins in plant growth and development. Plant J (2012) 0.93

Single and double knockouts of the genes for photosystem I subunits G, K, and H of Arabidopsis. Effects on photosystem I composition, photosynthetic electron flow, and state transitions. Plant Physiol (2002) 0.93

Arabidopsis plants lacking PsbQ and PsbR subunits of the oxygen-evolving complex show altered PSII super-complex organization and short-term adaptive mechanisms. Plant J (2013) 0.93

The E subunit of photosystem I is not essential for linear electron flow and photoautotrophic growth in Arabidopsis thaliana. Planta (2007) 0.91

Towards the analysis of the genomes of single cells: further characterisation of the multiple displacement amplification. Gene (2006) 0.91

Gene-sequence-tag expression analyses of 1,800 genes related to chloroplast functions. Planta (2002) 0.90

Proteomic characterization of iron deficiency responses in Cucumis sativus L. roots. BMC Plant Biol (2010) 0.90

Update on chloroplast research: new tools, new topics, and new trends. Mol Plant (2010) 0.88

Cadmium induces acidosis in maize root cells. New Phytol (2008) 0.88

Peach fruit ripening: A proteomic comparative analysis of the mesocarp of two cultivars with different flesh firmness at two ripening stages. Phytochemistry (2011) 0.85

Antioxidant and cytoprotective properties of infusions from leaves and inflorescences of Achillea collina Becker ex Rchb. Phytother Res (2009) 0.84

Lack of the Golgi phosphate transporter PHT4;6 causes strong developmental defects, constitutively activated disease resistance mechanisms and altered intracellular phosphate compartmentation in Arabidopsis. Plant J (2012) 0.84

Analysis of grape berry cell wall proteome: a comparative evaluation of extraction methods. J Plant Physiol (2008) 0.84

Impaired photosystem I oxidation induces STN7-dependent phosphorylation of the light-harvesting complex I protein Lhca4 in Arabidopsis thaliana. Planta (2007) 0.83

Ligation overcomes terminal underrepresentation in multiple displacement amplification of linear DNA. Biotechniques (2005) 0.83

Proteins involved in biotic and abiotic stress responses as the most significant biomarkers in the ripening of Pinot Noir skins. Funct Integr Genomics (2011) 0.83

Circulating salicylic acid and metabolic and inflammatory responses after fruit ingestion. Plant Foods Hum Nutr (2012) 0.82

The rice Mybleu transcription factor increases tolerance to oxygen deprivation in Arabidopsis plants. Physiol Plant (2007) 0.82

Deletion of an organellar peptidasome PreP affects early development in Arabidopsis thaliana. Plant Mol Biol (2009) 0.82

Influence of environmental factors on composition of phenolic antioxidants of Achillea collina Becker ex Rchb. Nat Prod Res (2010) 0.79

Oxidative stress and senescence-like status of pear calli co-cultured on suspensions of incompatible quince microcalli. Tree Physiol (2010) 0.78

Cadmium exposure and sulfate limitation reveal differences in the transcriptional control of three sulfate transporter (Sultr1;2) genes in Brassica juncea. BMC Plant Biol (2014) 0.77

Thylakoid redox signals are integrated into organellar-gene-expression-dependent retrograde signaling in the prors1-1 mutant. Front Plant Sci (2012) 0.77

Effect of NO3- transport and reduction on intracellular pH: an in vivo NMR study in maize roots. J Exp Bot (2004) 0.77

Proteomic characterization of the Rph15 barley resistance gene-mediated defence responses to leaf rust. BMC Genomics (2012) 0.77

Triosephosphate isomerases in Italian ryegrass ( Lolium multiflorum ): characterization and susceptibility to herbicides. J Agric Food Chem (2009) 0.77

Differentiation and functional connection of vascular elements in compatible and incompatible pear/quince internode micrografts. Tree Physiol (2005) 0.76

Effect of biotic and abiotic stresses on volatile emission of Achillea collina Becker ex Rchb. Nat Prod Res (2015) 0.76

Biotechnology for a more sustainable environment decontamination and energy production. J Biotechnol (2012) 0.76

The proteome of exudates from germinating Lupinus albus seeds is secreted through a selective dual-step process and contains proteins involved in plant defence. FEBS J (2013) 0.76

Adaptive responses to iron-deficiency in callus cultures of two cultivars of Vitis spp. J Plant Physiol (2003) 0.76

Tracking the function of the cytochrome c6-like protein in higher plants. Trends Plant Sci (2003) 0.75