Published in Microb Ecol on August 25, 2009
The ecological coherence of high bacterial taxonomic ranks. Nat Rev Microbiol (2010) 2.80
Shifts in soil microorganisms in response to warming are consistent across a range of Antarctic environments. ISME J (2011) 1.42
Evaluation of the ISO standard 11063 DNA extraction procedure for assessing soil microbial abundance and community structure. PLoS One (2012) 1.14
Protists have divergent effects on bacterial diversity along a productivity gradient. Biol Lett (2010) 0.92
Bacterial community structure and soil properties of a subarctic tundra soil in Council, Alaska. FEMS Microbiol Ecol (2014) 0.91
Plant soil interactions alter carbon cycling in an upland grassland soil. Front Microbiol (2013) 0.84
Taxonomic and functional profiles of soil samples from Atlantic forest and Caatinga biomes in northeastern Brazil. Microbiologyopen (2014) 0.82
A robust PCR primer design platform applied to the detection of Acidobacteria Group 1 in soil. Nucleic Acids Res (2012) 0.82
Diversity of bacterial communities in a profile of a winter wheat field: known and unknown members. Microb Ecol (2014) 0.81
Soil-borne bacterial structure and diversity does not reflect community activity in Pampa biome. PLoS One (2013) 0.81
Soil restoration with organic amendments: linking cellular functionality and ecosystem processes. Sci Rep (2015) 0.80
The impact of resource availability on bacterial resistance to phages in soil. PLoS One (2015) 0.80
Ecological restoration alters microbial communities in mine tailings profiles. Sci Rep (2016) 0.75
Effects of changes in straw chemical properties and alkaline soils on bacterial communities engaged in straw decomposition at different temperatures. Sci Rep (2016) 0.75
Links between soil microbial communities and plant traits in a species-rich grassland under long-term climate change. Ecol Evol (2017) 0.75
Ericoid Roots and Mycospheres Govern Plant-Specific Bacterial Communities in Boreal Forest Humus. Microb Ecol (2016) 0.75
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol (2007) 60.97
ARB: a software environment for sequence data. Nucleic Acids Res (2004) 58.27
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol (2006) 57.72
Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl Environ Microbiol (1997) 17.04
Ecological linkages between aboveground and belowground biota. Science (2004) 8.65
Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA. Appl Environ Microbiol (1998) 8.58
Toward an ecological classification of soil bacteria. Ecology (2007) 7.60
Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microbiol (2006) 6.67
Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition. Appl Environ Microbiol (2000) 5.91
Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Appl Environ Microbiol (2001) 4.28
New strategies for cultivation and detection of previously uncultured microbes. Appl Environ Microbiol (2004) 2.90
Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods. Appl Environ Microbiol (2001) 2.73
Molecular characterization of bacterial diversity from British Columbia forest soils subjected to disturbance. Can J Microbiol (2002) 2.61
Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms. Antonie Van Leeuwenhoek (2002) 2.17
Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA. Appl Environ Microbiol (2001) 1.95
Nodulation of acacia species by fast- and slow-growing tropical strains of Rhizobium. Appl Environ Microbiol (1981) 1.89
Effect of pH on isolation and distribution of members of subdivision 1 of the phylum Acidobacteria occurring in soil. Appl Environ Microbiol (2006) 1.69
Influence of depth and sampling time on bacterial community structure in an upland grassland soil. FEMS Microbiol Ecol (2003) 1.49
Captured diversity in a culture collection: case study of the geographic and habitat distributions of environmental isolates held at the american type culture collection. Appl Environ Microbiol (2005) 1.35
Stable isotope probing analysis of the influence of liming on root exudate utilization by soil microorganisms. Environ Microbiol (2005) 1.11
RNA stable isotope probing, a novel means of linking microbial community function to phylogeny. Appl Environ Microbiol (2002) 2.88
The bacterial biogeography of British soils. Environ Microbiol (2011) 2.39
Unlocking the potential of metagenomics through replicated experimental design. Nat Biotechnol (2012) 2.08
The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere. Microbiology (2002) 1.97
Physiological and community responses of established grassland bacterial populations to water stress. Appl Environ Microbiol (2003) 1.88
Unravelling rhizosphere-microbial interactions: opportunities and limitations. Trends Microbiol (2004) 1.77
Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci U S A (2011) 1.72
Costs and outcomes among hemodialysis-dependent patients with methicillin-resistant or methicillin-susceptible Staphylococcus aureus bacteremia. Infect Control Hosp Epidemiol (2005) 1.69
An observational study of outcomes after initial infused therapy in Medicare patients diagnosed with chronic lymphocytic leukemia. Blood (2010) 1.67
Cerebral sympathetic nerve activity has a major regulatory role in the cerebral circulation in REM sleep. J Appl Physiol (1985) (2009) 1.66
Local adaptation of bacteriophages to their bacterial hosts in soil. Science (2009) 1.62
Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2. Proc Natl Acad Sci U S A (2010) 1.59
Raman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function. Environ Microbiol (2007) 1.49
Influence of depth and sampling time on bacterial community structure in an upland grassland soil. FEMS Microbiol Ecol (2003) 1.49
Rapid turnover of hyphae of mycorrhizal fungi determined by AMS microanalysis of 14C. Science (2003) 1.49
Single-cell Raman spectral profiles of Pseudomonas fluorescens SBW25 reflects in vitro and in planta metabolic history. Microb Ecol (2007) 1.49
Raman microscopic analysis of single microbial cells. Anal Chem (2004) 1.42
Clinical outcomes and costs due to Staphylococcus aureus bacteremia among patients receiving long-term hemodialysis. Infect Control Hosp Epidemiol (2005) 1.38
Active root-inhabiting microbes identified by rapid incorporation of plant-derived carbon into RNA. Proc Natl Acad Sci U S A (2007) 1.28
Staphylococcus aureus bacteremia in patients with prosthetic devices: costs and outcomes. Am J Med (2005) 1.23
The future of microbial metagenomics (or is ignorance bliss?). ISME J (2010) 1.20
The ecology of transfer of mobile genetic elements. FEMS Microbiol Ecol (2002) 1.20
Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. Environ Microbiol (2008) 1.18
Sympathetic nerve activity in the superior cervical ganglia increases in response to imposed increases in arterial pressure. Am J Physiol Regul Integr Comp Physiol (2008) 1.15
Quantitative in situ assay of salicylic acid in tobacco leaves using a genetically modified biosensor strain of Acinetobacter sp. ADP1. Plant J (2006) 1.12
N-acyl-l-homoserine lactones (AHLs) affect microbial community composition and function in activated sludge. Environ Microbiol (2004) 1.12
Progress towards understanding the fate of plasmids in bacterial communities. FEMS Microbiol Ecol (2008) 1.12
Stable isotope probing analysis of the influence of liming on root exudate utilization by soil microorganisms. Environ Microbiol (2005) 1.11
Chromosomally located gene fusions constructed in Acinetobacter sp. ADP1 for the detection of salicylate. Environ Microbiol (2005) 1.11
Clinical and economic outcomes of Staphylococcus aureus septicemia in ESRD patients receiving hemodialysis. Am J Kidney Dis (2005) 1.09
Outcomes of Staphylococcus aureus infection in hemodialysis-dependent patients. Clin J Am Soc Nephrol (2008) 1.08
Technical considerations for RNA-based stable isotope probing: an approach to associating microbial diversity with microbial community function. Rapid Commun Mass Spectrom (2002) 1.05
Influence of plant developmental stage on microbial community structure and activity in the rhizosphere of three field crops. FEMS Microbiol Ecol (2008) 1.03
The response of marine picoplankton to ocean acidification. Environ Microbiol (2012) 1.01
Resolving genetic functions within microbial populations: in situ analyses using rRNA and mRNA stable isotope probing coupled with single-cell raman-fluorescence in situ hybridization. Appl Environ Microbiol (2008) 1.00
Acylated homoserine lactones in the environment: chameleons of bioactivity. Philos Trans R Soc Lond B Biol Sci (2007) 0.99
Raman tweezers sorting of single microbial cells. Environ Microbiol Rep (2009) 0.99
Analysis of the microbial functional diversity within water-stressed soil communities by flow cytometric analysis and CTC+ cell sorting. J Microbiol Methods (2003) 0.96
Weekly flow cytometric analysis of riverine phytoplankton to determine seasonal bloom dynamics. Environ Sci Process Impacts (2014) 0.96
13CO2 pulse labelling of plants in tandem with stable isotope probing: methodological considerations for examining microbial function in the rhizosphere. J Microbiol Methods (2004) 0.96
Comparison of bacterioneuston and bacterioplankton dynamics during a phytoplankton bloom in a fjord mesocosm. Appl Environ Microbiol (2009) 0.96
Sequence-based analysis of pQBR103; a representative of a unique, transfer-proficient mega plasmid resident in the microbial community of sugar beet. ISME J (2007) 0.94
Protists have divergent effects on bacterial diversity along a productivity gradient. Biol Lett (2010) 0.92
The indigenous Pseudomonas plasmid pQBR103 encodes plant-inducible genes, including three putative helicases. FEMS Microbiol Ecol (2004) 0.92
Evolution of beetle bioluminescence: the origin of beetle luciferin. Luminescence (2004) 0.92
Ecological consequences of ingestion of Bacillus cereus on Bacillus thuringiensis infections and on the gut flora of a lepidopteran host. J Invertebr Pathol (2008) 0.91
The tritrophic trinity: a source of pollutant-degrading enzymes and its implications for phytoremediation. Curr Opin Microbiol (2004) 0.90
The histidine utilization (hut) genes of Pseudomonas fluorescens SBW25 are active on plant surfaces, but are not required for competitive colonization of sugar beet seedlings. Microbiology (2006) 0.90
Characterization of Serratia isolates from soil, ecological implications and transfer of Serratia proteamaculans subsp. quinovora Grimont et al. 1983 to Serratia quinivorans corrig., sp. nov. Int J Syst Evol Microbiol (2002) 0.90
The effect of pre-existing maternal obesity on the placental proteome: two-dimensional difference gel electrophoresis coupled with mass spectrometry. J Mol Endocrinol (2012) 0.89
Vegetation exerts a greater control on litter decomposition than climate warming in peatlands. Ecology (2015) 0.89
Closely related protist strains have different grazing impacts on natural bacterial communities. Environ Microbiol (2010) 0.88
Prevalence and incidence of comorbidities in elderly women with ovarian cancer. Gynecol Oncol (2013) 0.87
Effects of species evenness and dominant species identity on multiple ecosystem functions in model grassland communities. Oecologia (2013) 0.87
Bacterial diversity is determined by volume in membrane bioreactors. Environ Microbiol (2006) 0.87
2D-DIGE to identify proteins associated with gestational diabetes in omental adipose tissue. J Endocrinol (2013) 0.87
Sympathetic withdrawal augments cerebral blood flow during acute hypercapnia in sleeping lambs. Sleep (2008) 0.86
Marine bacterial communities are resistant to elevated carbon dioxide levels. Environ Microbiol Rep (2014) 0.86
Mortality differences among organisms causing septicemia in hemodialysis patients. Hemodial Int (2006) 0.85
Evidence for phenotypic plasticity among multihost Campylobacter jejuni and C. coli lineages, obtained using ribosomal multilocus sequence typing and Raman spectroscopy. Appl Environ Microbiol (2012) 0.84
Seasonal variations in decomposition processes in a valley-bottom riparian peatland. Sci Total Environ (2006) 0.84
Plant soil interactions alter carbon cycling in an upland grassland soil. Front Microbiol (2013) 0.84
Dissolved organic carbon and bacterial populations in the gelatinous surface microlayer of a Norwegian fjord mesocosm. FEMS Microbiol Lett (2009) 0.84
Use of a novel nonantibiotic triple marker gene cassette to monitor high survival of Pseudomonas fluorescens SBW25 on winter wheat in the field. FEMS Microbiol Ecol (2007) 0.83
Clinical outcomes and costs among patients with Staphylococcus aureus bacteremia and orthopedic device infections. Scand J Infect Dis (2008) 0.83
Functional and compositional comparison of two activated sludge communities remediating coking effluent. Environ Microbiol (2005) 0.83
Life in earth: the impact of GM plants on soil ecology? Trends Biotechnol (2005) 0.83
Characterizing the regulation of the Pu promoter in Acinetobacter baylyi ADP1. Environ Microbiol (2008) 0.83
Septicemia in patients with ESRD is associated with decreased hematocrit and increased use of erythropoietin. Clin J Am Soc Nephrol (2006) 0.82
Effects of sieving, drying and rewetting upon soil bacterial community structure and respiration rates. J Microbiol Methods (2010) 0.81
Long term changes in the distribution and delta(15)N values of individual soil amino acids in the absence of plant and fertiliser inputs. Isotopes Environ Health Stud (2004) 0.80
Bacterial community structure and function in a metal-working fluid. Environ Microbiol (2003) 0.80
The evolution of the adenylate-forming protein family in beetles: multiple luciferase gene paralogues in fireflies and glow-worms. Mol Phylogenet Evol (2008) 0.80
Bioaugmentation strategies for remediating mixed chemical effluents. Biotechnol Prog (2003) 0.80
Identification of ovarian cancer-associated proteins in symptomatic women: A novel method for semi-quantitative plasma proteomics. Proteomics Clin Appl (2012) 0.79
The speed of soil carbon throughput in an upland grassland is increased by liming. J Exp Bot (2003) 0.79
Insights into the fate of a 13C labelled phenol pulse for stable isotope probing (SIP) experiments. J Microbiol Methods (2007) 0.78
Functional and phylogenetic analysis of a plant-inducible oligoribonuclease (orn) gene from an indigenous Pseudomonas plasmid. Microbiology (2004) 0.78
Hydrocarbon utilization within a diesel-degrading bacterial consortium. FEMS Microbiol Lett (2009) 0.78