Published in J Proteome Res on February 05, 2010
Proteomic analysis of the Vibrio cholerae type II secretome reveals new proteins, including three related serine proteases. J Biol Chem (2011) 1.20
Neuronal porosome proteome: Molecular dynamics and architecture. J Proteomics (2012) 0.89
Molecular characterization of the endoplasmic reticulum: insights from proteomic studies. Proteomics (2010) 0.88
Recent advances in the investigation of pancreatic inflammation induced by large doses of basic amino acids in rodents. Lab Invest (2013) 0.84
The human pancreas proteome defined by transcriptomics and antibody-based profiling. PLoS One (2014) 0.81
Transmembrane and coiled-coil domain family 1 is a novel protein of the endoplasmic reticulum. PLoS One (2014) 0.81
Proteome of the porosome complex in human airway epithelia: interaction with the cystic fibrosis transmembrane conductance regulator (CFTR). J Proteomics (2013) 0.79
Advances in acute and chronic pancreatitis: from development to inflammation and repair. Gastroenterology (2012) 0.78
Aquaporin-assisted and ER-mediated mitochondrial fission: a hypothesis. Micron (2013) 0.78
Proteomics as a systems approach to pancreatitis. Pancreas (2013) 0.78
Elongation Factor 1A-1 Is a Mediator of Hepatocyte Lipotoxicity Partly through Its Canonical Function in Protein Synthesis. PLoS One (2015) 0.78
Effects of hypoxia on the proliferation, mineralization and ultrastructure of human periodontal ligament fibroblasts in vitro. Exp Ther Med (2013) 0.77
Proteomics analysis of rough endoplasmic reticulum in pancreatic beta cells. Proteomics (2015) 0.76
Proteins Differentially Expressed in the Pancreas of Hepatic Alcohol Dehydrogenase-Deficient Deer Mice Fed Ethanol For 3 Months. Pancreas (2017) 0.75
The ryanodine receptor is expressed in human pancreatic acinar cells and contributes to acinar cell injury. Am J Physiol Gastrointest Liver Physiol (2014) 0.75
Oligoethylene glycol-substituted aza-BODIPY dyes as red emitting ER-probes. Org Biomol Chem (2015) 0.75
Laser Capture Microdissection of Pancreatic Acinar Cells to Identify Proteomic Alterations in a Murine Model of Caerulein-Induced Pancreatitis. Clin Transl Gastroenterol (2017) 0.75
Treatment with didemnin B, an elongation factor 1A inhibitor, improves hepatic lipotoxicity in obese mice. Physiol Rep (2016) 0.75
A model for random sampling and estimation of relative protein abundance in shotgun proteomics. Anal Chem (2004) 19.20
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics (2004) 19.05
DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists. Nucleic Acids Res (2007) 17.46
Intracellular transport of secretory proteins in the pancreatic exocrine cell. I. Role of the peripheral elements of the Golgi complex. J Cell Biol (1967) 9.01
The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra. Mol Cell Proteomics (2007) 7.52
Intracellular transport of secretory proteins in the pancreatic exocrine cell. II. Transport to condensing vacuoles and zymogen granules. J Cell Biol (1967) 6.81
Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Cell (2003) 6.77
Endoplasmic reticulum stress signaling in disease. Physiol Rev (2006) 5.90
Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling. Cell (2006) 5.72
Endoplasmic reticulum stress and oxidative stress: a vicious cycle or a double-edged sword? Antioxid Redox Signal (2007) 5.17
The Rat Genome Database, update 2007--easing the path from disease to data and back again. Nucleic Acids Res (2006) 4.80
A mammalian organelle map by protein correlation profiling. Cell (2006) 4.54
Quantitative proteomics analysis of the secretory pathway. Cell (2006) 3.63
Acute interstitial pancreatitis in the rat induced by excessive doses of a pancreatic secretagogue. Virchows Arch A Pathol Anat Histol (1977) 3.54
Proteomics of organelles and large cellular structures. Nat Rev Mol Cell Biol (2005) 2.98
Acute pancreatitis: bench to the bedside. Gastroenterology (2007) 2.78
Intracellular transport of secretory proteins in the pancreatic exocrine cell. 3. Dissociation of intracellular transport from protein synthesis. J Cell Biol (1968) 2.71
Differential protein expression profiling by iTRAQ-2DLC-MS/MS of lung cancer cells undergoing epithelial-mesenchymal transition reveals a migratory/invasive phenotype. J Proteome Res (2006) 2.43
Synthesis, intracellular transport and discharge of exportable proteins in the pancreatic acinar cell and other cells. Biol Rev Camb Philos Soc (1978) 2.36
Pathophysiology of acute pancreatitis. Pancreatology (2005) 2.25
Acute hemorrhagic pancreatitis (massive necrosis) with fat necrosis induced in mice by DL-ethionine fed with a choline-deficient diet. Am J Pathol (1975) 2.23
NF-kappaB/Rel activation in cerulein pancreatitis. Gastroenterology (1999) 2.21
Development of a new mouse model of acute pancreatitis induced by administration of L-arginine. Am J Physiol Gastrointest Liver Physiol (2006) 2.05
Caerulein-induced acute necrotizing pancreatitis in mice: protective effects of proglumide, benzotript, and secretin. Gastroenterology (1985) 1.92
Intra-acinar cell activation of trypsinogen during caerulein-induced pancreatitis in rats. Am J Physiol (1998) 1.89
NF-kappaB activation in pancreas induces pancreatic and systemic inflammatory response. Gastroenterology (2002) 1.84
Organellar proteomics: turning inventories into insights. EMBO Rep (2006) 1.63
Highly sensitive peptide-4-methylcoumaryl-7-amide substrates for blood-clotting proteases and trypsin. Eur J Biochem (1988) 1.62
Proteomic analysis of chronic pancreatitis and pancreatic adenocarcinoma. Gastroenterology (2005) 1.61
Quantitative proteomics analysis reveals that proteins differentially expressed in chronic pancreatitis are also frequently involved in pancreatic cancer. Mol Cell Proteomics (2007) 1.58
Why does pancreatic overstimulation cause pancreatitis? Annu Rev Physiol (2007) 1.56
A critical role for eukaryotic elongation factor 1A-1 in lipotoxic cell death. Mol Biol Cell (2005) 1.55
Organellar proteomics: analysis of pancreatic zymogen granule membranes. Mol Cell Proteomics (2005) 1.49
Cell stress modulates the function of splicing regulatory protein RBM4 in translation control. Proc Natl Acad Sci U S A (2007) 1.48
Intracellular signaling mechanisms activated by cholecystokinin-regulating synthesis and secretion of digestive enzymes in pancreatic acinar cells. Annu Rev Physiol (2001) 1.43
Comparison of pancreas juice proteins from cancer versus pancreatitis using quantitative proteomic analysis. Pancreas (2007) 1.35
New model of acute necrotizing pancreatitis induced by excessive doses of arginine in rats. Dig Dis Sci (1990) 1.32
Temporal quantitative proteomics by iTRAQ 2D-LC-MS/MS and corresponding mRNA expression analysis identify post-transcriptional modulation of actin-cytoskeleton regulators during TGF-beta-Induced epithelial-mesenchymal transition. J Proteome Res (2009) 1.29
Pancreatic gene expression during the initiation of acute pancreatitis: identification of EGR-1 as a key regulator. Physiol Genomics (2003) 1.28
Mice lacking the transcription factor Mist1 exhibit an altered stress response and increased sensitivity to caerulein-induced pancreatitis. Am J Physiol Gastrointest Liver Physiol (2006) 1.27
eIF4A controls germline stem cell self-renewal by directly inhibiting BAM function in the Drosophila ovary. Proc Natl Acad Sci U S A (2009) 1.27
Early activation of endoplasmic reticulum stress is associated with arginine-induced acute pancreatitis. Am J Physiol Gastrointest Liver Physiol (2006) 1.24
ERp19 and ERp46, new members of the thioredoxin family of endoplasmic reticulum proteins. Mol Cell Proteomics (2003) 1.22
Edema and intrapancreatic trypsinogen activation precede glutathione depletion during caerulein pancreatitis. Am J Physiol (1996) 1.16
Mouse translation elongation factor eEF1A-2 interacts with Prdx-I to protect cells against apoptotic death induced by oxidative stress. J Cell Biochem (2007) 1.14
Increased proteasome activity, ubiquitin-conjugating enzymes, and eEF1A translation factor detected in breast cancer tissue. Cancer Res (2005) 1.13
Disassembly of rat pancreatic acinar cell cytoskeleton during supramaximal secretagogue stimulation. Am J Physiol (1995) 1.10
Quantitative shotgun proteomics of enriched heterocysts from Nostoc sp. PCC 7120 using 8-plex isobaric peptide tags. J Proteome Res (2008) 1.08
Effects of injecting excess arginine on rat pancreas. J Nutr (1984) 1.03
Global topology analysis of pancreatic zymogen granule membrane proteins. Mol Cell Proteomics (2008) 1.00
Arginine induced acute pancreatitis alters the actin cytoskeleton and increases heat shock protein expression in rat pancreatic acinar cells. Gut (2001) 0.98
ERp27, a new non-catalytic endoplasmic reticulum-located human protein disulfide isomerase family member, interacts with ERp57. J Biol Chem (2006) 0.96
The initiation factor eIF4A is involved in the response to lithium stress in Saccharomyces cerevisiae. J Biol Chem (2002) 0.96
The Hera database and its use in the characterization of endoplasmic reticulum proteins. Bioinformatics (2004) 0.95
Coordinate IGF-I and IGFBP5 gene expression in perinatal rat brain after hypoxia-ischemia. J Cereb Blood Flow Metab (1996) 0.94
Localization of ATP-dependent calcium transport activity in mouse pancreatic microsomes. J Membr Biol (1983) 0.93
Pathogenesis of acute pancreatitis. Digestion (1997) 0.92
Caerulein-induced acute pancreatitis inhibits protein synthesis through effects on eIF2B and eIF4F. Am J Physiol Gastrointest Liver Physiol (2003) 0.91
Translational control of protein synthesis in pancreatic acinar cells. Int J Gastrointest Cancer (2002) 0.86
Actin overexpression parallels severity of pancreatic injury. Exp Cell Res (2004) 0.86
Proteomic profiling in an animal model of acute pancreatitis. Proteomics (2008) 0.83
Proteome analysis of rat pancreatic acinar cells: implication for cerulein-induced acute pancreatitis. Proteomics (2003) 0.81
Has the biology and treatment of pancreatic diseases evolved? Best Pract Res Clin Gastroenterol (2004) 0.80
Protective effect of a microtubule stabilizer taxol on caerulein-induced acute pancreatitis in rat. J Clin Invest (1992) 0.78
Human Proteinpedia enables sharing of human protein data. Nat Biotechnol (2008) 4.21
Gene expression in ovarian cancer reflects both morphology and biological behavior, distinguishing clear cell from other poor-prognosis ovarian carcinomas. Cancer Res (2002) 3.62
Joint estimation of multiple graphical models. Biometrika (2011) 3.08
Quantifying changes in the thiol redox proteome upon oxidative stress in vivo. Proc Natl Acad Sci U S A (2008) 2.65
Raising high-density lipoprotein in humans through inhibition of cholesteryl ester transfer protein: an initial multidose study of torcetrapib. Arterioscler Thromb Vasc Biol (2004) 2.64
Notch signaling modulates proliferation and differentiation of intestinal crypt base columnar stem cells. Development (2011) 2.45
Differential protein expression profiling by iTRAQ-2DLC-MS/MS of lung cancer cells undergoing epithelial-mesenchymal transition reveals a migratory/invasive phenotype. J Proteome Res (2006) 2.43
ConceptGen: a gene set enrichment and gene set relation mapping tool. Bioinformatics (2009) 2.11
NF-kappaB activation in pancreas induces pancreatic and systemic inflammatory response. Gastroenterology (2002) 1.84
A class of selective antibacterials derived from a protein kinase inhibitor pharmacophore. Proc Natl Acad Sci U S A (2009) 1.82
Energy determinants GAPDH and NDPK act as genetic modifiers for hepatocyte inclusion formation. J Cell Biol (2011) 1.72
Analysis of gene sets based on the underlying regulatory network. J Comput Biol (2009) 1.67
The Escherichia coli GTPase CgtAE is involved in late steps of large ribosome assembly. J Bacteriol (2006) 1.67
Metscape: a Cytoscape plug-in for visualizing and interpreting metabolomic data in the context of human metabolic networks. Bioinformatics (2010) 1.62
Proteomics of microparticles after deep venous thrombosis. Thromb Res (2010) 1.50
Organellar proteomics: analysis of pancreatic zymogen granule membranes. Mol Cell Proteomics (2005) 1.49
Penalized likelihood methods for estimation of sparse high-dimensional directed acyclic graphs. Biometrika (2010) 1.45
Network enrichment analysis in complex experiments. Stat Appl Genet Mol Biol (2010) 1.44
Leishmaniasis: current treatment and prospects for new drugs and vaccines. Curr Med Chem (2009) 1.43
Immunoassay and antibody microarray analysis of the HUPO Plasma Proteome Project reference specimens: systematic variation between sample types and calibration of mass spectrometry data. Proteomics (2005) 1.38
Development and validation of a 96-well equilibrium dialysis apparatus for measuring plasma protein binding. J Pharm Sci (2003) 1.35
Validated MALDI-TOF/TOF mass spectra for protein standards. J Am Soc Mass Spectrom (2007) 1.35
ProteomeCommons.org collaborative annotation and project management resource integrated with the Tranche repository. J Proteome Res (2010) 1.31
Discovering graphical Granger causality using the truncating lasso penalty. Bioinformatics (2010) 1.31
Temporal quantitative proteomics by iTRAQ 2D-LC-MS/MS and corresponding mRNA expression analysis identify post-transcriptional modulation of actin-cytoskeleton regulators during TGF-beta-Induced epithelial-mesenchymal transition. J Proteome Res (2009) 1.29
Rab27b localizes to zymogen granules and regulates pancreatic acinar exocytosis. Biochem Biophys Res Commun (2004) 1.29
Metabolomic profiling reveals potential markers and bioprocesses altered in bladder cancer progression. Cancer Res (2011) 1.26
Comprehensive phosphoprotein analysis of linker histone H1 from Tetrahymena thermophila. Mol Cell Proteomics (2006) 1.26
Metabolomic profiling reveals a role for androgen in activating amino acid metabolism and methylation in prostate cancer cells. PLoS One (2011) 1.25
Tranche distributed repository and ProteomeCommons.org. Methods Mol Biol (2011) 1.25
Early activation of endoplasmic reticulum stress is associated with arginine-induced acute pancreatitis. Am J Physiol Gastrointest Liver Physiol (2006) 1.24
Metabolic consequences of sepsis-induced acute lung injury revealed by plasma ¹H-nuclear magnetic resonance quantitative metabolomics and computational analysis. Am J Physiol Lung Cell Mol Physiol (2010) 1.21
Proteomic analysis of the Vibrio cholerae type II secretome reveals new proteins, including three related serine proteases. J Biol Chem (2011) 1.20
Intracellular trypsin induces pancreatic acinar cell death but not NF-kappaB activation. J Biol Chem (2009) 1.19
Development of natural protein microarrays for diagnosing cancer based on an antibody response to tumor antigens. J Proteome Res (2004) 1.19
Comparing exposure metrics for classifying 'dangerous heat' in heat wave and health warning systems. Environ Int (2012) 1.19
The role of sarcosine metabolism in prostate cancer progression. Neoplasia (2013) 1.18
Proteomics FASTA archive and reference resource. Proteomics (2008) 1.18
Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence. Mol Cell Proteomics (2007) 1.17
Munc18c interaction with syntaxin 4 monomers and SNARE complex intermediates in GLUT4 vesicle trafficking. J Biol Chem (2007) 1.16
Cholecystokinin activates pancreatic calcineurin-NFAT signaling in vitro and in vivo. Mol Biol Cell (2007) 1.14
Proteomic interrogation of androgen action in prostate cancer cells reveals roles of aminoacyl tRNA synthetases. PLoS One (2009) 1.14
Quantitative proteomic profiling of prostate cancer reveals a role for miR-128 in prostate cancer. Mol Cell Proteomics (2009) 1.13
Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation. Mol Cell Proteomics (2008) 1.11
Early events of Bacillus anthracis germination identified by time-course quantitative proteomics. Proteomics (2006) 1.10
Calcineurin mediates pancreatic growth in protease inhibitor-treated mice. Am J Physiol Gastrointest Liver Physiol (2003) 1.09
Improved classification of mass spectrometry database search results using newer machine learning approaches. Mol Cell Proteomics (2005) 1.08
Dominant negative Rab3D inhibits amylase release from mouse pancreatic acini. J Biol Chem (2002) 1.08
A wide range of protein isoforms in serum and plasma uncovered by a quantitative intact protein analysis system. Proteomics (2005) 1.08
Structural and functional discovery in dynamic networks with non-negative matrix factorization. Phys Rev E Stat Nonlin Soft Matter Phys (2013) 1.07
Regulation of CCK-induced amylase release by PKC-delta in rat pancreatic acinar cells. Am J Physiol Gastrointest Liver Physiol (2004) 1.05
Presence of the adenovirus IVa2 protein at a single vertex of the mature virion. J Virol (2008) 1.04
Fluorescence resonance energy transfer reports properties of syntaxin1a interaction with Munc18-1 in vivo. J Biol Chem (2004) 1.02
Dominant negative Rab3D mutants reduce GTP-bound endogenous Rab3D in pancreatic acini. J Biol Chem (2003) 1.02
Global topology analysis of pancreatic zymogen granule membrane proteins. Mol Cell Proteomics (2008) 1.00
Regulator of calcineurin 1 controls growth plasticity of adult pancreas. Gastroenterology (2010) 1.00
Multiple functional domains are involved in tomosyn regulation of exocytosis. J Neurochem (2007) 1.00
Hyperthermia induces multiple pancreatic heat shock proteins and protects against subsequent arginine-induced acute pancreatitis in rats. Digestion (2002) 1.00
Untargeted LC-MS metabolomics of bronchoalveolar lavage fluid differentiates acute respiratory distress syndrome from health. J Proteome Res (2013) 1.00
Receptor-mediated regulation of tomosyn-syntaxin 1A interactions in bovine adrenal chromaffin cells. J Biol Chem (2007) 1.00
Proteomic analysis of mdx skeletal muscle: Great reduction of adenylate kinase 1 expression and enzymatic activity. Proteomics (2003) 1.00
Calcineurin is required for translational control of protein synthesis in rat pancreatic acini. Am J Physiol Cell Physiol (2004) 0.99
LRpath analysis reveals common pathways dysregulated via DNA methylation across cancer types. BMC Genomics (2012) 0.99
Regulation of human methylenetetrahydrofolate reductase by phosphorylation. Proc Natl Acad Sci U S A (2005) 0.97
Pairwise variable selection for high-dimensional model-based clustering. Biometrics (2010) 0.96
A spectral clustering approach to MS/MS identification of post-translational modifications. J Proteome Res (2008) 0.96
A role for Rho and Rac in secretagogue-induced amylase release by pancreatic acini. Am J Physiol Cell Physiol (2005) 0.95
Leptin-mediated changes in hepatic mitochondrial metabolism, structure, and protein levels. Proc Natl Acad Sci U S A (2009) 0.95
Comparison of MS(2)-only, MSA, and MS(2)/MS(3) methodologies for phosphopeptide identification. J Proteome Res (2009) 0.95
Bile acids induce pancreatic acinar cell injury and pancreatitis by activating calcineurin. J Biol Chem (2012) 0.95
Leucine activates pancreatic translational machinery in rats and mice through mTOR independently of CCK and insulin. J Nutr (2006) 0.94
Quantitative proteomics analysis of cell cycle-regulated Golgi disassembly and reassembly. J Biol Chem (2010) 0.94
Drugability of extracellular targets: discovery of small molecule drugs targeting allosteric, functional, and subunit-selective sites on GPCRs and ion channels. Neuropsychopharmacology (2008) 0.93
Profiling the alkaline membrane proteome of Caulobacter crescentus with two-dimensional electrophoresis and mass spectrometry. Proteomics (2002) 0.93
Regulation of translation elongation and phosphorylation of eEF2 in rat pancreatic acini. Biochem Biophys Res Commun (2004) 0.92