Published in Biochem Biophys Res Commun on December 11, 2009
The path to next generation biofuels: successes and challenges in the era of synthetic biology. Microb Cell Fact (2010) 1.26
A comprehensive and quantitative review of dark fermentative biohydrogen production. Microb Cell Fact (2012) 0.99
Exploiting adaptive laboratory evolution of Streptomyces clavuligerus for antibiotic discovery and overproduction. PLoS One (2012) 0.92
Efficient synthesis of L-lactic acid from glycerol by metabolically engineered Escherichia coli. Microb Cell Fact (2013) 0.90
Hydrogen production by recombinant Escherichia coli strains. Microb Biotechnol (2011) 0.84
Metabolomic basis of laboratory evolution of butanol tolerance in photosynthetic Synechocystis sp. PCC 6803. Microb Cell Fact (2014) 0.84
Visualizing evolution in real-time method for strain engineering. Front Microbiol (2012) 0.83
Utilization of biodiesel by-products for biogas production. J Biomed Biotechnol (2011) 0.81
Biocatalysis for the application of CO2 as a chemical feedstock. Beilstein J Org Chem (2015) 0.80
Population level analysis of evolved mutations underlying improvements in plant hemicellulose and cellulose fermentation by Clostridium phytofermentans. PLoS One (2014) 0.77
Dependence on the F0F1-ATP synthase for the activities of the hydrogen-oxidizing hydrogenases 1 and 2 during glucose and glycerol fermentation at high and low pH in Escherichia coli. J Bioenerg Biomembr (2011) 0.77
Oxidative and reductive routes of glycerol and glucose fermentation by Escherichia coli batch cultures and their regulation by oxidizing and reducing reagents at different pHs. Curr Microbiol (2012) 0.76
Physiology and bioenergetics of [NiFe]-hydrogenase 2-catalyzed H2-consuming and H2-producing reactions in Escherichia coli. J Bacteriol (2014) 0.76
Bioconversion of glycerol for bioethanol production using isolated Escherichia coli ss1. Braz J Microbiol (2012) 0.75
Identification of enhanced hydrogen and ethanol Escherichia coli producer strains in a glycerol-based medium by screening in single-knock out mutant collections. Microb Cell Fact (2015) 0.75
Improved glycerol to ethanol conversion by E. coli using a metagenomic fragment isolated from an anaerobic reactor. J Ind Microbiol Biotechnol (2016) 0.75
Autoinducer 2 controls biofilm formation in Escherichia coli through a novel motility quorum-sensing regulator (MqsR, B3022). J Bacteriol (2006) 3.14
Indole is an inter-species biofilm signal mediated by SdiA. BMC Microbiol (2007) 2.62
Temporal gene-expression in Escherichia coli K-12 biofilms. Environ Microbiol (2007) 2.40
Antitoxin MqsA helps mediate the bacterial general stress response. Nat Chem Biol (2011) 2.30
Toxin-antitoxin systems influence biofilm and persister cell formation and the general stress response. Appl Environ Microbiol (2011) 2.19
Cryptic prophages help bacteria cope with adverse environments. Nat Commun (2010) 2.05
Connecting quorum sensing, c-di-GMP, pel polysaccharide, and biofilm formation in Pseudomonas aeruginosa through tyrosine phosphatase TpbA (PA3885). PLoS Pathog (2009) 2.01
Differential gene expression shows natural brominated furanones interfere with the autoinducer-2 bacterial signaling system of Escherichia coli. Biotechnol Bioeng (2004) 1.78
Bacterial quorum sensing: signals, circuits, and implications for biofilms and disease. Annu Rev Biomed Eng (2008) 1.77
YliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling. Appl Environ Microbiol (2006) 1.74
The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation. Proc Natl Acad Sci U S A (2009) 1.73
YcfR (BhsA) influences Escherichia coli biofilm formation through stress response and surface hydrophobicity. J Bacteriol (2007) 1.67
Directed evolution of toluene ortho-monooxygenase for enhanced 1-naphthol synthesis and chlorinated ethene degradation. J Bacteriol (2002) 1.67
A new type V toxin-antitoxin system where mRNA for toxin GhoT is cleaved by antitoxin GhoS. Nat Chem Biol (2012) 1.67
Three dimensional structure of the MqsR:MqsA complex: a novel TA pair comprised of a toxin homologous to RelE and an antitoxin with unique properties. PLoS Pathog (2009) 1.65
Toxins Hha and CspD and small RNA regulator Hfq are involved in persister cell formation through MqsR in Escherichia coli. Biochem Biophys Res Commun (2009) 1.62
Differential effects of epinephrine, norepinephrine, and indole on Escherichia coli O157:H7 chemotaxis, colonization, and gene expression. Infect Immun (2007) 1.62
Toxin-antitoxin systems in Escherichia coli influence biofilm formation through YjgK (TabA) and fimbriae. J Bacteriol (2008) 1.61
YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. J Bacteriol (2006) 1.58
Quorum quenching quandary: resistance to antivirulence compounds. ISME J (2011) 1.53
Role of luxS in Bacillus anthracis growth and virulence factor expression. Virulence (2010) 1.52
Protein translation and cell death: the role of rare tRNAs in biofilm formation and in activating dormant phage killer genes. PLoS One (2008) 1.49
Quorum sensing in Escherichia coli is signaled by AI-2/LsrR: effects on small RNA and biofilm architecture. J Bacteriol (2007) 1.47
Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD. Environ Microbiol (2010) 1.46
Indole cell signaling occurs primarily at low temperatures in Escherichia coli. ISME J (2008) 1.45
Hha, YbaJ, and OmpA regulate Escherichia coli K12 biofilm formation and conjugation plasmids abolish motility. Biotechnol Bioeng (2006) 1.44
Differential gene expression for investigation of Escherichia coli biofilm inhibition by plant extract ursolic acid. Appl Environ Microbiol (2005) 1.43
Indole and 7-hydroxyindole diminish Pseudomonas aeruginosa virulence. Microb Biotechnol (2008) 1.38
Structure and function of the Escherichia coli protein YmgB: a protein critical for biofilm formation and acid-resistance. J Mol Biol (2007) 1.38
Enterohemorrhagic Escherichia coli biofilms are inhibited by 7-hydroxyindole and stimulated by isatin. Appl Environ Microbiol (2007) 1.36
Stationary-phase quorum-sensing signals affect autoinducer-2 and gene expression in Escherichia coli. Appl Environ Microbiol (2004) 1.35
Metabolic engineering to enhance bacterial hydrogen production. Microb Biotechnol (2008) 1.34
Enhanced hydrogen production from glucose by metabolically engineered Escherichia coli. Appl Microbiol Biotechnol (2007) 1.33
Arrested protein synthesis increases persister-like cell formation. Antimicrob Agents Chemother (2013) 1.33
The natural furanone (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone disrupts quorum sensing-regulated gene expression in Vibrio harveyi by decreasing the DNA-binding activity of the transcriptional regulator protein luxR. Environ Microbiol (2007) 1.29
Evolution of resistance to quorum-sensing inhibitors. Microb Ecol (2013) 1.27
Control and benefits of CP4-57 prophage excision in Escherichia coli biofilms. ISME J (2009) 1.25
Pseudomonas aeruginosa PAO1 virulence factors and poplar tree response in the rhizosphere. Microb Biotechnol (2008) 1.21
Oxidation of benzene to phenol, catechol, and 1,2,3-trihydroxybenzene by toluene 4-monooxygenase of Pseudomonas mendocina KR1 and toluene 3-monooxygenase of Ralstonia pickettii PKO1. Appl Environ Microbiol (2004) 1.20
OmpA influences Escherichia coli biofilm formation by repressing cellulose production through the CpxRA two-component system. Environ Microbiol (2009) 1.20
Inhibition of Bacillus anthracis growth and virulence-gene expression by inhibitors of quorum-sensing. J Infect Dis (2005) 1.19
Temporal regulation of enterohemorrhagic Escherichia coli virulence mediated by autoinducer-2. Appl Microbiol Biotechnol (2008) 1.16
Chemotaxis to the quorum-sensing signal AI-2 requires the Tsr chemoreceptor and the periplasmic LsrB AI-2-binding protein. J Bacteriol (2010) 1.16
Quorum sensing-disrupting brominated furanones protect the gnotobiotic brine shrimp Artemia franciscana from pathogenic Vibrio harveyi, Vibrio campbellii, and Vibrio parahaemolyticus isolates. Appl Environ Microbiol (2006) 1.16
Protein engineering of toluene-o-xylene monooxygenase from Pseudomonas stutzeri OX1 for synthesizing 4-methylresorcinol, methylhydroquinone, and pyrogallol. Appl Environ Microbiol (2004) 1.14
Controlling biofilm formation, prophage excision and cell death by rewiring global regulator H-NS of Escherichia coli. Microb Biotechnol (2010) 1.14
Escherichia coli transcription factor YncC (McbR) regulates colanic acid and biofilm formation by repressing expression of periplasmic protein YbiM (McbA). ISME J (2008) 1.14
Controlling the regiospecific oxidation of aromatics via active site engineering of toluene para-monooxygenase of Ralstonia pickettii PKO1. J Biol Chem (2004) 1.13
Saturation mutagenesis of toluene ortho-monooxygenase of Burkholderia cepacia G4 for Enhanced 1-naphthol synthesis and chloroform degradation. Appl Environ Microbiol (2004) 1.13
Gene expression in Bacillus subtilis surface biofilms with and without sporulation and the importance of yveR for biofilm maintenance. Biotechnol Bioeng (2004) 1.12
Structure of the Escherichia coli antitoxin MqsA (YgiT/b3021) bound to its gene promoter reveals extensive domain rearrangements and the specificity of transcriptional regulation. J Biol Chem (2010) 1.11
Reconfiguring the quorum-sensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones. Appl Environ Microbiol (2009) 1.10
Uracil influences quorum sensing and biofilm formation in Pseudomonas aeruginosa and fluorouracil is an antagonist. Microb Biotechnol (2008) 1.10
Environmental factors affecting indole production in Escherichia coli. Res Microbiol (2010) 1.10
Metabolically engineered bacteria for producing hydrogen via fermentation. Microb Biotechnol (2008) 1.08
Protein engineering of toluene 4-monooxygenase of Pseudomonas mendocina KR1 for synthesizing 4-nitrocatechol from nitrobenzene. Biotechnol Bioeng (2004) 1.07
Altering toluene 4-monooxygenase by active-site engineering for the synthesis of 3-methoxycatechol, methoxyhydroquinone, and methylhydroquinone. J Bacteriol (2004) 1.07
Bacterial persistence increases as environmental fitness decreases. Microb Biotechnol (2012) 1.06
Indole production promotes Escherichia coli mixed-culture growth with Pseudomonas aeruginosa by inhibiting quorum signaling. Appl Environ Microbiol (2011) 1.03
Quorum-sensing antagonist (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone influences siderophore biosynthesis in Pseudomonas putida and Pseudomonas aeruginosa. Appl Microbiol Biotechnol (2004) 1.03
Protein engineering of toluene ortho-monooxygenase of Burkholderia cepacia G4 for regiospecific hydroxylation of indole to form various indigoid compounds. Appl Microbiol Biotechnol (2004) 1.03
Antitoxin DinJ influences the general stress response through transcript stabilizer CspE. Environ Microbiol (2011) 1.03
Type II toxin/antitoxin MqsR/MqsA controls type V toxin/antitoxin GhoT/GhoS. Environ Microbiol (2013) 1.03
Protein engineering of toluene monooxygenases for synthesis of chiral sulfoxides. Appl Environ Microbiol (2008) 1.02
Engineering a novel c-di-GMP-binding protein for biofilm dispersal. Environ Microbiol (2010) 1.02
Synthetic quorum-sensing circuit to control consortial biofilm formation and dispersal in a microfluidic device. Nat Commun (2012) 1.02
Escherichia coli hydrogenase 3 is a reversible enzyme possessing hydrogen uptake and synthesis activities. Appl Microbiol Biotechnol (2007) 1.02
An inducible propane monooxygenase is responsible for N-nitrosodimethylamine degradation by Rhodococcus sp. strain RHA1. Appl Environ Microbiol (2007) 1.01
Engineering plant-microbe symbiosis for rhizoremediation of heavy metals. Appl Environ Microbiol (2006) 1.00
Enantioconvergent production of (R)-1-phenyl-1,2-ethanediol from styrene oxide by combining the Solanum tuberosum and an evolved Agrobacterium radiobacter AD1 epoxide hydrolases. Biotechnol Bioeng (2006) 1.00
A naturally occurring brominated furanone covalently modifies and inactivates LuxS. Bioorg Med Chem Lett (2009) 0.99
The neuroendocrine hormone norepinephrine increases Pseudomonas aeruginosa PA14 virulence through the las quorum-sensing pathway. Appl Microbiol Biotechnol (2009) 0.98
Transcriptomic analysis for genetic mechanisms of the factors related to biofilm formation in Escherichia coli O157:H7. Curr Microbiol (2011) 0.96
The R1 conjugative plasmid increases Escherichia coli biofilm formation through an envelope stress response. Appl Environ Microbiol (2008) 0.96
IS5 inserts upstream of the master motility operon flhDC in a quasi-Lamarckian way. ISME J (2011) 0.96
Resistance to quorum-quenching compounds. Appl Environ Microbiol (2013) 0.96
Differential gene expression to investigate the effect of (5Z)-4-bromo- 5-(bromomethylene)-3-butyl-2(5H)-furanone on Bacillus subtilis. Appl Environ Microbiol (2004) 0.96
A metagenomic assessment of the bacteria associated with Lucilia sericata and Lucilia cuprina (Diptera: Calliphoridae). Appl Microbiol Biotechnol (2014) 0.95
Protein acetylation in prokaryotes increases stress resistance. Biochem Biophys Res Commun (2011) 0.94
Tyrosine Phosphatase TpbA of Pseudomonas aeruginosa Controls Extracellular DNA via Cyclic Diguanylic Acid Concentrations. Environ Microbiol (2010) 0.94
Molecular phylogenetics and evolution of maternal care in Membracine treehoppers. Syst Biol (2004) 0.94
Aerobic biodegradation of N-nitrosodimethylamine (NDMA) by axenic bacterial strains. Biotechnol Bioeng (2005) 0.94
A stochastic model of Escherichia coli AI-2 quorum signal circuit reveals alternative synthesis pathways. Mol Syst Biol (2006) 0.93
PA2663 (PpyR) increases biofilm formation in Pseudomonas aeruginosa PAO1 through the psl operon and stimulates virulence and quorum-sensing phenotypes. Appl Microbiol Biotechnol (2007) 0.93
Potassium and sodium transporters of Pseudomonas aeruginosa regulate virulence to barley. Appl Microbiol Biotechnol (2008) 0.93
Engineering global regulator Hha of Escherichia coli to control biofilm dispersal. Microb Biotechnol (2010) 0.93
Antitoxin MqsA represses curli formation through the master biofilm regulator CsgD. Sci Rep (2013) 0.92
Protein engineering of toluene-o-xylene monooxygenase from Pseudomonas stutzeri OX1 for oxidizing nitrobenzene to 3-nitrocatechol, 4-nitrocatechol, and nitrohydroquinone. J Biotechnol (2005) 0.92
Protein engineering of epoxide hydrolase from Agrobacterium radiobacter AD1 for enhanced activity and enantioselective production of (R)-1-phenylethane-1,2-diol. Appl Environ Microbiol (2005) 0.92
Tyrosine phosphatase TpbA controls rugose colony formation in Pseudomonas aeruginosa by dephosphorylating diguanylate cyclase TpbB. Biochem Biophys Res Commun (2010) 0.91
Phosphodiesterase DosP increases persistence by reducing cAMP which reduces the signal indole. Biotechnol Bioeng (2014) 0.90
GGDEF proteins YeaI, YedQ, and YfiN reduce early biofilm formation and swimming motility in Escherichia coli. Appl Microbiol Biotechnol (2010) 0.90
Proteus mirabilis interkingdom swarming signals attract blow flies. ISME J (2012) 0.90
Toluene 3-monooxygenase of Ralstonia pickettii PKO1 is a para-hydroxylating enzyme. J Bacteriol (2004) 0.89
Toxin GhoT of the GhoT/GhoS toxin/antitoxin system damages the cell membrane to reduce adenosine triphosphate and to reduce growth under stress. Environ Microbiol (2014) 0.89
A microfluidic device for high throughput bacterial biofilm studies. Lab Chip (2012) 0.88
5-Fluorouracil reduces biofilm formation in Escherichia coli K-12 through global regulator AriR as an antivirulence compound. Appl Microbiol Biotechnol (2009) 0.88
Protein engineering of toluene-o-xylene monooxygenase from Pseudomonas stutzeri OX1 for enhanced chlorinated ethene degradation and o-xylene oxidation. Appl Microbiol Biotechnol (2005) 0.88
Inhibiting mild steel corrosion from sulfate-reducing and iron-oxidizing bacteria using gramicidin-S-producing biofilms. Appl Microbiol Biotechnol (2004) 0.87
Metabolic engineering of Escherichia coli to enhance hydrogen production from glycerol. Appl Microbiol Biotechnol (2014) 0.87