Published in Genes Genet Syst on August 01, 2009
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A widespread family of bacterial cell wall assembly proteins. EMBO J (2011) 2.33
Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase. DNA Res (2006) 2.11
Discovery of two novel families of proteins that are proposed to interact with prokaryotic SMC proteins, and characterization of the Bacillus subtilis family members ScpA and ScpB. Mol Microbiol (2002) 2.06
A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO. Science (2003) 2.03
Whole-genome analysis of genes regulated by the Bacillus subtilis competence transcription factor ComK. J Bacteriol (2002) 2.01
An RNA-modifying enzyme that governs both the codon and amino acid specificities of isoleucine tRNA. Mol Cell (2003) 1.90
Six GTP-binding proteins of the Era/Obg family are essential for cell growth in Bacillus subtilis. Microbiology (2002) 1.76
Zinc is a key factor in controlling alternation of two types of L31 protein in the Bacillus subtilis ribosome. Mol Microbiol (2004) 1.65
Proteomics characterization of novel spore proteins of Bacillus subtilis. Microbiology (2002) 1.61
The BceRS two-component regulatory system induces expression of the bacitracin transporter, BceAB, in Bacillus subtilis. Mol Microbiol (2003) 1.58
Noc protein binds to specific DNA sequences to coordinate cell division with chromosome segregation. EMBO J (2009) 1.56
A new FtsZ-interacting protein, YlmF, complements the activity of FtsA during progression of cell division in Bacillus subtilis. Mol Microbiol (2006) 1.49
Identification of a protein, YneA, responsible for cell division suppression during the SOS response in Bacillus subtilis. Mol Microbiol (2003) 1.47
Binding of response regulator DegU to the aprE promoter is inhibited by RapG, which is counteracted by extracellular PhrG in Bacillus subtilis. Mol Microbiol (2003) 1.47
Distribution of stable DnaA-binding sites on the Bacillus subtilis genome detected using a modified ChIP-chip method. DNA Res (2007) 1.37
Inferring gene regulatory networks from time-ordered gene expression data of Bacillus subtilis using differential equations. Pac Symp Biocomput (2003) 1.34
Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis. DNA Res (2008) 1.32
The GTP-binding protein YlqF participates in the late step of 50 S ribosomal subunit assembly in Bacillus subtilis. J Biol Chem (2006) 1.32
Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation. Nucleic Acids Res (2010) 1.30
Global regulation by horizontally transferred regulators establishes the pathogenicity of Escherichia coli. DNA Res (2008) 1.27
Synergistic regulation of competence development in Bacillus subtilis by two Rap-Phr systems. J Bacteriol (2005) 1.27
A complete set of Escherichia coli open reading frames in mobile plasmids facilitating genetic studies. DNA Res (2005) 1.26
Bacillus minimum genome factory: effective utilization of microbial genome information. Biotechnol Appl Biochem (2007) 1.25
Detergent alkaline proteases: enzymatic properties, genes, and crystal structures. J Biosci Bioeng (2007) 1.22
Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses. Gene (2004) 1.22
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Bacillus subtilis RghR (YvaN) represses rapG and rapH, which encode inhibitors of expression of the srfA operon. Mol Microbiol (2006) 1.09
Increasing the ratio of Soj to Spo0J promotes replication initiation in Bacillus subtilis. J Bacteriol (2003) 1.09
Bacillus subtilis YabA is involved in determining the timing and synchrony of replication initiation. FEMS Microbiol Lett (2005) 1.08
Cloning and characterization of mevalonate pathway genes in a natural rubber producing plant, Hevea brasiliensis. Biosci Biotechnol Biochem (2008) 1.08
The Bacillus subtilis YufLM two-component system regulates the expression of the malate transporters MaeN (YufR) and YflS, and is essential for utilization of malate in minimal medium. Microbiology (2003) 1.06
spoIVH (ykvV), a requisite cortex formation gene, is expressed in both sporulating compartments of Bacillus subtilis. J Bacteriol (2004) 1.06
Transcriptional, functional and cytochemical analyses of the veg gene in Bacillus subtilis. J Biochem (2003) 1.05
Bacillus subtilis EzrA and FtsL synergistically regulate FtsZ ring dynamics during cell division. Microbiology (2006) 1.05
Characterization of relationships between transcriptional units and operon structures in Bacillus subtilis and Escherichia coli. BMC Genomics (2007) 1.05
Metabolomics approach for determining growth-specific metabolites based on Fourier transform ion cyclotron resonance mass spectrometry. Anal Bioanal Chem (2008) 1.04
The functional analysis of YabA, which interacts with DnaA and regulates initiation of chromosome replication in Bacillus subtils. Genes Genet Syst (2008) 1.04
Large ring polymers align FtsZ polymers for normal septum formation. EMBO J (2011) 1.03
The GTP-binding protein YqeH participates in biogenesis of the 30S ribosome subunit in Bacillus subtilis. Genes Genet Syst (2007) 1.03
The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids. J Mol Evol (2003) 1.03
Functional analysis of the YvrGHb two-component system of Bacillus subtilis: identification of the regulated genes by DNA microarray and northern blot analyses. Biosci Biotechnol Biochem (2005) 1.02
Two separate DNA sequences within oriC participate in accurate chromosome segregation in Bacillus subtilis. Mol Microbiol (2002) 1.02
Structural and genetic analyses reveal the protein SepF as a new membrane anchor for the Z ring. Proc Natl Acad Sci U S A (2013) 1.00
The H2O2 stress-responsive regulator PerR positively regulates srfA expression in Bacillus subtilis. J Bacteriol (2005) 0.99
Differential binding profiles of StpA in wild-type and h-ns mutant cells: a comparative analysis of cooperative partners by chromatin immunoprecipitation-microarray analysis. J Bacteriol (2009) 0.98
Reassessment of the in vivo functions of DNA polymerase I and RNase H in bacterial cell growth. J Bacteriol (2007) 0.97
Introduction of marker-free deletions in Bacillus subtilis using the AraR repressor and the ara promoter. Microbiology (2008) 0.96
Molecular strategy for survival at a critical high temperature in Eschierichia coli. PLoS One (2011) 0.95
Involvement of the YneS/YgiH and PlsX proteins in phospholipid biosynthesis in both Bacillus subtilis and Escherichia coli. BMC Microbiol (2007) 0.94
Cloning and characterization of the 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway genes of a natural-rubber producing plant, Hevea brasiliensis. Biosci Biotechnol Biochem (2008) 0.94
Expression of a small (p)ppGpp synthetase, YwaC, in the (p)ppGpp(0) mutant of Bacillus subtilis triggers YvyD-dependent dimerization of ribosome. Microbiologyopen (2012) 0.93
Mutation in yaaT leads to significant inhibition of phosphorelay during sporulation in Bacillus subtilis. J Bacteriol (2002) 0.92
Effects on transcription of mutations in ygjD, yeaZ, and yjeE genes, which are involved in a universal tRNA modification in Escherichia coli. J Bacteriol (2011) 0.91
Anaerobic regulation of citrate fermentation by CitAB in Escherichia coli. Biosci Biotechnol Biochem (2008) 0.91
Isolation and characterization of a dominant negative mutant of Bacillus subtilis GTP-binding protein, YlqF, essential for biogenesis and maintenance of the 50 S ribosomal subunit. J Biol Chem (2007) 0.91
Assessment of transcriptional responses of Bacillus subtilis cells to the antibiotic enduracidin, which interferes with cell wall synthesis, using a high-density tiling chip. Genes Genet Syst (2009) 0.90
Regulation of chromosomal replication initiation by oriC-proximal DnaA-box clusters in Bacillus subtilis. Nucleic Acids Res (2011) 0.90
Dynamics of time-lagged gene-to-metabolite networks of Escherichia coli elucidated by integrative omics approach. OMICS (2010) 0.90
Combined effect of improved cell yield and increased specific productivity enhances recombinant enzyme production in genome-reduced Bacillus subtilis strain MGB874. Appl Environ Microbiol (2011) 0.88
Bacillus subtilis spoVIF (yjcC) gene, involved in coat assembly and spore resistance. Microbiology (2003) 0.88
Transcription factor GreA contributes to resolving promoter-proximal pausing of RNA polymerase in Bacillus subtilis cells. J Bacteriol (2011) 0.86
Effect of Bacillus subtilis spo0A mutation on cell wall lytic enzymes and extracellular proteases, and prevention of cell lysis. J Biosci Bioeng (2007) 0.85
High external pH enables more efficient secretion of alkaline α-amylase AmyK38 by Bacillus subtilis. Microb Cell Fact (2012) 0.85
RNA polymerase trafficking in Bacillus subtilis cells. J Bacteriol (2010) 0.84
Characterization of CitA-CitB signal transduction activating genes involved in anaerobic citrate catabolism in Escherichia coli. Biosci Biotechnol Biochem (2009) 0.84
The entire organization of transcription units on the Bacillus subtilis genome. BMC Genomics (2007) 0.84
Identification and characterization of a novel polysaccharide deacetylase C (PdaC) from Bacillus subtilis. J Biol Chem (2012) 0.84
Genetic manipulations restored the growth fitness of reduced-genome Escherichia coli. J Biosci Bioeng (2013) 0.83
Functions of the Hha and YdgT proteins in transcriptional silencing by the nucleoid proteins, H-NS and StpA, in Escherichia coli. DNA Res (2013) 0.83
yaaD and yaaE are involved in vitamin B6 biosynthesis in Bacillus subtilis. J Biosci Bioeng (2002) 0.83
Intragenomic diversity of the V1 regions of 16S rRNA genes in high-alkaline protease-producing Bacillus clausii spp. Extremophiles (2007) 0.83
AMDORAP: non-targeted metabolic profiling based on high-resolution LC-MS. BMC Bioinformatics (2011) 0.83
Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites. J Biol Chem (2003) 0.83
High-resolution mapping of in vivo genomic transcription factor binding sites using in situ DNase I footprinting and ChIP-seq. DNA Res (2013) 0.83
Repression of sigK intervening (skin) element gene expression by the CI-like protein SknR and effect of SknR depletion on growth of Bacillus subtilis cells. J Bacteriol (2010) 0.82
Functional analysis of the protein Veg, which stimulates biofilm formation in Bacillus subtilis. J Bacteriol (2013) 0.81
Bacillus subtilis AprX involved in degradation of a heterologous protein during the late stationary growth phase. J Biosci Bioeng (2007) 0.81
Cyanobacterial genes transmitted to the nucleus before divergence of red algae in the Chromista. J Mol Evol (2004) 0.80
Enhanced extracellular production of heterologous proteins in Bacillus subtilis by deleting the C-terminal region of the SecA secretory machinery. Mol Biotechnol (2010) 0.80
Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model. BMC Bioinformatics (2007) 0.80