Published in Evolution on January 21, 2010
Microbial interactions: from networks to models. Nat Rev Microbiol (2012) 3.28
A global network of coexisting microbes from environmental and whole-genome sequence data. Genome Res (2010) 2.85
Environments that induce synthetic microbial ecosystems. PLoS Comput Biol (2010) 2.04
Plant-fungal ecology. Niche engineering demonstrates a latent capacity for fungal-algal mutualism. Science (2014) 1.96
Social evolution in multispecies biofilms. Proc Natl Acad Sci U S A (2011) 1.58
What can ecosystems learn? Expanding evolutionary ecology with learning theory. Biol Direct (2015) 1.42
Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamics. Cell Rep (2014) 1.39
Selective sweeps in growing microbial colonies. Phys Biol (2012) 1.31
Genetic drift opposes mutualism during spatial population expansion. Proc Natl Acad Sci U S A (2014) 1.23
feedback between population and evolutionary dynamics determines the fate of social microbial populations. PLoS Biol (2013) 1.23
Spatial self-organization favors heterotypic cooperation over cheating. Elife (2013) 1.23
Syntrophic exchange in synthetic microbial communities. Proc Natl Acad Sci U S A (2014) 1.19
Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria. ISME J (2013) 1.13
Adaptation to a new environment allows cooperators to purge cheaters stochastically. Proc Natl Acad Sci U S A (2012) 1.10
Evolution of restraint in a structured rock-paper-scissors community. Proc Natl Acad Sci U S A (2011) 1.10
Evolutionary limits to cooperation in microbial communities. Proc Natl Acad Sci U S A (2014) 1.08
Evolution of microbial markets. Proc Natl Acad Sci U S A (2014) 1.03
Engineering ecosystems and synthetic ecologies. Mol Biosyst (2012) 1.02
A programmable Escherichia coli consortium via tunable symbiosis. PLoS One (2012) 1.01
Emergent biosynthetic capacity in simple microbial communities. PLoS Comput Biol (2014) 0.99
Availability of public goods shapes the evolution of competing metabolic strategies. Proc Natl Acad Sci U S A (2013) 0.99
Cooperative adaptation to establishment of a synthetic bacterial mutualism. PLoS One (2011) 0.98
Metabolic and demographic feedbacks shape the emergent spatial structure and function of microbial communities. PLoS Comput Biol (2013) 0.97
Co-culture systems and technologies: taking synthetic biology to the next level. J R Soc Interface (2014) 0.96
From metabolism to ecology: cross-feeding interactions shape the balance between polymicrobial conflict and mutualism. Am Nat (2012) 0.89
A multi-platform flow device for microbial (co-) cultivation and microscopic analysis. PLoS One (2012) 0.88
Synthetic Ecology of Microbes: Mathematical Models and Applications. J Mol Biol (2015) 0.88
Privatization of cooperative benefits stabilizes mutualistic cross-feeding interactions in spatially structured environments. ISME J (2015) 0.87
Ecological perspectives on synthetic biology: insights from microbial population biology. Front Microbiol (2015) 0.85
Engineering microbial consortia for controllable outputs. ISME J (2016) 0.84
Intra-tumor heterogeneity: lessons from microbial evolution and clinical implications. Genome Med (2013) 0.84
Pervasive Selection for Cooperative Cross-Feeding in Bacterial Communities. PLoS Comput Biol (2016) 0.84
Origins of multicellular evolvability in snowflake yeast. Nat Commun (2015) 0.83
Evolution of cooperative cross-feeding could be less challenging than originally thought. PLoS One (2010) 0.82
Self-establishing communities enable cooperative metabolite exchange in a eukaryote. Elife (2015) 0.82
Evolutionary Transition from Pathogenicity to Commensalism: Global Regulator Mutations Mediate Fitness Gains through Virulence Attenuation. Mol Biol Evol (2015) 0.82
Erosion of functional independence early in the evolution of a microbial mutualism. Proc Natl Acad Sci U S A (2014) 0.81
The demographic determinants of human microbiome health. Trends Microbiol (2014) 0.81
Synthetic biology expands chemical control of microorganisms. Curr Opin Chem Biol (2015) 0.80
Recent Developments in Systems Biology and Metabolic Engineering of Plant-Microbe Interactions. Front Plant Sci (2016) 0.80
Species interactions differ in their genetic robustness. Front Microbiol (2015) 0.79
Parallel changes in the taxonomical structure of bacterial communities exposed to a similar environmental disturbance. Ecol Evol (2011) 0.78
Adaptive evolution of synthetic cooperating communities improves growth performance. PLoS One (2014) 0.78
Bacteria dialog with Santa Rosalia: Are aggregations of cosmopolitan bacteria mainly explained by habitat filtering or by ecological interactions? BMC Microbiol (2014) 0.78
Metabolic modeling of a chronic wound biofilm consortium predicts spatial partitioning of bacterial species. BMC Syst Biol (2016) 0.78
Insights into resource consumption, cross-feeding, system collapse, stability and biodiversity from an artificial ecosystem. J R Soc Interface (2017) 0.77
Acknowledging selection at sub-organismal levels resolves controversy on pro-cooperation mechanisms. Elife (2015) 0.76
Microbial mutualism dynamics governed by dose-dependent toxicity of cross-fed nutrients. ISME J (2016) 0.76
Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0. PLoS Comput Biol (2016) 0.76
Adding biotic complexity alters the metabolic benefits of mutualism. Evolution (2016) 0.75
Social dilemmas among supergenes: intragenomic sexual conflict and a selfing solution in Oenothera. Evolution (2011) 0.75
Parallel Mutations Result in a Wide Range of Cooperation and Community Consequences in a Two-Species Bacterial Consortium. PLoS One (2016) 0.75
Experimental Evolution as an Underutilized Tool for Studying Beneficial Animal-Microbe Interactions. Front Microbiol (2016) 0.75
A passive mutualistic interaction promotes the evolution of spatial structure within microbial populations. BMC Evol Biol (2017) 0.75
Extended inclusive fitness theory: synergy and assortment drives the evolutionary dynamics in biology and economics. Springerplus (2016) 0.75
Joint evolution of kin recognition and cooperation in spatially structured rhizobium populations. PLoS One (2014) 0.75
Inferring microbial interactions in thermophilic and mesophilic anaerobic digestion of hog waste. PLoS One (2017) 0.75
The evolution of host-symbiont dependence. Nat Commun (2017) 0.75
More than just a gut feeling: constraint-based genome-scale metabolic models for predicting functions of human intestinal microbes. Microbiome (2017) 0.75
Integration of mesenchymal stem cells into islet cell spheroids improves long-term viability, but not islet function. Islets (2017) 0.75