Published in Biochemistry on April 20, 2010
Direct observations of conformational distributions of intrinsically disordered p53 peptides using UV Raman and explicit solvent simulations. J Phys Chem A (2011) 0.78
Glutamine and Asparagine Side Chain Hyperconjugation-Induced Structurally Sensitive Vibrations. J Phys Chem B (2015) 0.75
Environmental polarity induces conformational transitions in a helical peptide sequence from bacteriophage T4 lysozyme and its tandem duplicate: a molecular dynamics simulation study. J Mol Model (2015) 0.75
Determination of the helix and beta form of proteins in aqueous solution by circular dichroism. Biochemistry (1974) 8.54
Improving enzymes by using them in organic solvents. Nature (2001) 3.84
Mechanism of helix induction by trifluoroethanol: a framework for extrapolating the helix-forming properties of peptides from trifluoroethanol/water mixtures back to water. Biochemistry (1997) 3.52
Parameters of helix-coil transition theory for alanine-based peptides of varying chain lengths in water. Biopolymers (1991) 3.51
Trifluoroethanol and colleagues: cosolvents come of age. Recent studies with peptides and proteins. Q Rev Biophys (1998) 2.66
Peptide secondary structure folding reaction coordinate: correlation between uv raman amide III frequency, Psi Ramachandran angle, and hydrogen bonding. J Phys Chem B (2006) 1.66
Mechanism by which 2,2,2-trifluoroethanol/water mixtures stabilize secondary-structure formation in peptides: a molecular dynamics study. Proc Natl Acad Sci U S A (2002) 1.64
Properties and Synthetic Applications of Enzymes in Organic Solvents. Angew Chem Int Ed Engl (2000) 1.58
Steady-state and transient ultraviolet resonance Raman spectrometer for the 193-270 nm spectral region. Appl Spectrosc (2005) 1.52
Importance of environment in determining secondary structure in proteins. Biochemistry (1994) 1.46
UV Raman demonstrates that alpha-helical polyalanine peptides melt to polyproline II conformations. J Am Chem Soc (2004) 1.36
Theoretical CD studies of polypeptide helices: examination of important electronic and geometric factors. Biopolymers (1991) 1.33
Protein structure, stability and solubility in water and other solvents. Philos Trans R Soc Lond B Biol Sci (2004) 1.25
Uncoupled peptide bond vibrations in alpha-helical and polyproline II conformations of polyalanine peptides. J Phys Chem B (2005) 1.24
Direct UV Raman monitoring of 3(10)-helix and pi-bulge premelting during alpha-helix unfolding. J Am Chem Soc (2006) 1.19
Recent advances in helix-coil theory. Biophys Chem (2002) 1.17
Dependence of amide vibrations on hydrogen bonding. J Phys Chem B (2008) 1.06
Group additive contributions to the alcohol-induced alpha-helix formation of melittin: implication for the mechanism of the alcohol effects on proteins. J Mol Biol (1998) 1.06
Trifluoroethanol may form a solvent matrix for assisted hydrophobic interactions between peptide side chains. Protein Eng (2000) 1.03
Solvation phenomena of a tetrapeptide in water/trifluoroethanol and water/ethanol mixtures: a diffusion NMR, intermolecular NOE, and molecular dynamics study. J Am Chem Soc (2002) 1.02
UV resonance Raman measurements of poly-L-lysine's conformational energy landscapes: dependence on perchlorate concentration and temperature. J Phys Chem B (2007) 1.01
Influence of the environment in the conformation of alpha-helices studied by protein database search and molecular dynamics simulations. Biophys J (2002) 1.01
Estimating the relative populations of 3(10)-helix and alpha-helix in Ala-rich peptides: a hydrogen exchange and high field NMR study. J Mol Biol (1997) 1.00
Comparison between UV Raman and circular dichroism detection of short alpha helices in bombolitin III. Biochemistry (2002) 0.99
The solvation interface is a determining factor in peptide conformational preferences. J Mol Biol (2005) 0.98
Solvent dependence of PII conformation in model alanine peptides. J Am Chem Soc (2004) 0.97
Effect of hexafluoroisopropanol alcohol on the structure of melittin: a molecular dynamics simulation study. Protein Sci (2005) 0.97
Spectroscopic evidence for backbone desolvation of helical peptides by 2,2,2-trifluoroethanol: an isotope-edited FTIR study. Biochemistry (2005) 0.97
Salt dependence of an alpha-helical peptide folding energy landscapes. Biochemistry (2009) 0.93
Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols. Acta Crystallogr D Biol Crystallogr (2005) 0.90
Molecular dynamics simulations of the native and partially folded states of ubiquitin: influence of methanol cosolvent, pH, and temperature on the protein structure and dynamics. Protein Sci (2007) 0.89
Stability of proteins: temperature, pressure and the role of the solvent. Biochim Biophys Acta (2005) 0.89
Structure and solvation of melittin in 1,1,1,3,3,3-hexafluoro-2-propanol/water. Biophys J (2004) 0.87
Enthalpic and entropic stages in alpha-helical peptide unfolding, from laser T-jump/UV Raman spectroscopy. J Am Chem Soc (2007) 0.87
Computer simulations study of biomolecules in non-aqueous or cosolvent/water mixture solutions. Curr Protein Pept Sci (2008) 0.85
Molecular simulation of the effects of alcohols on peptide structure. Biopolymers (1999) 0.82
Peptide bond vibrational coupling. J Phys Chem B (2007) 0.81
Photonic crystal glucose-sensing material for noninvasive monitoring of glucose in tear fluid. Clin Chem (2004) 1.97
Peptide secondary structure folding reaction coordinate: correlation between uv raman amide III frequency, Psi Ramachandran angle, and hydrogen bonding. J Phys Chem B (2006) 1.66
Steady-state and transient ultraviolet resonance Raman spectrometer for the 193-270 nm spectral region. Appl Spectrosc (2005) 1.52
UV-resonance raman thermal unfolding study of Trp-cage shows that it is not a simple two-state miniprotein. J Am Chem Soc (2005) 1.52
A general photonic crystal sensing motif: creatinine in bodily fluids. J Am Chem Soc (2004) 1.51
High ionic strength glucose-sensing photonic crystal. Anal Chem (2003) 1.30
Synthesis and utilization of monodisperse hollow polymeric particles in photonic crystals. J Am Chem Soc (2004) 1.24
Uncoupled peptide bond vibrations in alpha-helical and polyproline II conformations of polyalanine peptides. J Phys Chem B (2005) 1.24
Nanogel nanosecond photonic crystal optical switching. J Am Chem Soc (2004) 1.21
Direct UV Raman monitoring of 3(10)-helix and pi-bulge premelting during alpha-helix unfolding. J Am Chem Soc (2006) 1.19
Fast responsive crystalline colloidal array photonic crystal glucose sensors. Anal Chem (2006) 1.17
Tear glucose analysis for the noninvasive detection and monitoring of diabetes mellitus. Ocul Surf (2007) 1.16
UV resonance Raman determination of polyproline II, extended 2.5(1)-helix, and beta-sheet Psi angle energy landscape in poly-L-lysine and poly-L-glutamic acid. J Am Chem Soc (2005) 1.13
UV resonance Raman investigations of peptide and protein structure and dynamics. Chem Rev (2012) 1.08
Dependence of amide vibrations on hydrogen bonding. J Phys Chem B (2008) 1.06
Polymerized PolyHEMA photonic crystals: pH and ethanol sensor materials. J Am Chem Soc (2008) 1.04
Analysis of tear glucose concentration with electrospray ionization mass spectrometry. J Am Soc Mass Spectrom (2006) 1.02
Mesoscopic monodisperse ferromagnetic colloids enable magnetically controlled photonic crystals. J Am Chem Soc (2002) 1.01
UV resonance Raman measurements of poly-L-lysine's conformational energy landscapes: dependence on perchlorate concentration and temperature. J Phys Chem B (2007) 1.01
Progress toward the development of a point-of-care photonic crystal ammonia sensor. Anal Bioanal Chem (2006) 1.01
Comparison between UV Raman and circular dichroism detection of short alpha helices in bombolitin III. Biochemistry (2002) 0.99
UV Raman spatially resolved melting dynamics of isotopically labeled polyalanyl peptide: slow alpha-helix melting follows 3(10)-helices and pi-bulges premelting. J Phys Chem B (2007) 0.98
Mass spectral determination of fasting tear glucose concentrations in nondiabetic volunteers. Clin Chem (2007) 0.98
Salt dependence of an alpha-helical peptide folding energy landscapes. Biochemistry (2009) 0.93
Elucidating Peptide and Protein Structure and Dynamics: UV Resonance Raman Spectroscopy. J Phys Chem Lett (2011) 0.93
UV resonance raman investigation of electronic transitions in alpha-helical and polyproline II-like conformations. J Phys Chem B (2008) 0.91
Insight into resolution enhancement in generalized two-dimensional correlation spectroscopy. Appl Spectrosc (2013) 0.91
UV resonance Raman spectroscopy monitors polyglutamine backbone and side chain hydrogen bonding and fibrillization. Biochemistry (2012) 0.91
Ultraviolet resonance Raman study of side chain electrostatic control of poly-L-lysine conformation. J Phys Chem B (2011) 0.89
UV resonance Raman determination of molecular mechanism of poly(N-isopropylacrylamide) volume phase transition. J Phys Chem B (2009) 0.88
Light diffraction from colloidal crystals with low dielectric constant modulation: Simulations using single-scattering theory. Phys Rev B Condens Matter Mater Phys (2008) 0.87
Photonic crystal sensor for organophosphate nerve agents utilizing the organophosphorus hydrolase enzyme. Anal Bioanal Chem (2007) 0.87
Acetylcholinesterase-based organophosphate nerve agent sensing photonic crystal. Anal Chem (2005) 0.87
UV raman examination of alpha-helical peptide water hydrogen bonding. J Am Chem Soc (2005) 0.85
Poly(vinyl alcohol) Rehydratable Photonic Crystal Sensor Materials. Adv Funct Mater (2008) 0.84
UV Resonance Raman Elucidation of the Terminal and Internal Peptide Bond Conformations of Crystalline and Solution Oligoglycines. J Phys Chem Lett (2010) 0.84
Fabrication of large-area two-dimensional colloidal crystals. Angew Chem Int Ed Engl (2012) 0.84
Critical role of the solvent environment in galectin-1 binding to the disaccharide lactose. Biochemistry (2009) 0.84
Polymerized crystalline colloidal array sensing of high glucose concentrations. Anal Chem (2009) 0.83
Sodium perchlorate effects on the helical stability of a mainly alanine peptide. Biophys J (2010) 0.83
Photonic crystal optrode sensor for detection of Pb2+ in high ionic strength environments. Anal Chem (2003) 0.82
Periodicity-controlled two-dimensional crystalline colloidal arrays. Langmuir (2011) 0.82
Progress in developing polymerized crystalline colloidal array sensors for point-of-care detection of myocardial ischemia. Analyst (2008) 0.82
Dependence of the AmII'p proline Raman band on peptide conformation. J Phys Chem B (2009) 0.81
UVRR spectroscopic studies of valinomycin complex formation in different solvents. Spectrochim Acta A Mol Biomol Spectrosc (2005) 0.81
Peptide bond vibrational coupling. J Phys Chem B (2007) 0.81
Modeling of stimulated hydrogel volume changes in photonic crystal Pb2+ sensing materials. J Am Chem Soc (2005) 0.81
2-D array photonic crystal sensing motif. J Am Chem Soc (2011) 0.81
Computational and experimental determination of the alpha-helix unfolding reaction coordinate. Biochemistry (2008) 0.81
UV resonance Raman and DFT studies of arginine side chains in peptides: insights into arginine hydration. J Phys Chem B (2013) 0.80
Circular dichroism and ultraviolet resonance Raman indicate little Arg-Glu side chain α-helix peptide stabilization. J Phys Chem B (2011) 0.80
Deep ultraviolet resonance Raman excitation enables explosives detection. Appl Spectrosc (2010) 0.80
Dependence of glycine CH2 stretching frequencies on conformation, ionization state, and hydrogen bonding. J Phys Chem B (2008) 0.80
UV resonance Raman investigation of the conformations and lowest energy allowed electronic excited states of tri- and tetraalanine: charge transfer transitions. J Phys Chem B (2010) 0.80
UV resonance raman spectroscopic detection of nitrate and nitrite in wastewater treatment processes. Anal Chem (2002) 0.79
UV resonance Raman investigation of a 3(10)-helical peptide reveals a rough energy landscape. Biochemistry (2006) 0.79
Lowest energy electronic transition in aqueous Cl(-) salts: Cl(-) → (H2O)6 charge transfer transition. J Phys Chem A (2010) 0.79
2D photonic crystal protein hydrogel coulometer for sensing serum albumin ligand binding. Anal Chem (2014) 0.79
UV resonance Raman finds peptide bond-Arg side chain electronic interactions. J Phys Chem B (2011) 0.78
High-throughput, high-resolution Echelle deep-UV Raman spectrometer. Appl Spectrosc (2013) 0.78
Direct observations of conformational distributions of intrinsically disordered p53 peptides using UV Raman and explicit solvent simulations. J Phys Chem A (2011) 0.78
Sodium dodecyl sulfate monomers induce XAO peptide polyproline II to α-helix transition. J Phys Chem B (2014) 0.77
Circular dichroism and UV-resonance Raman investigation of the temperature dependence of the conformations of linear and cyclic elastin. Biopolymers (2009) 0.77
Dependence of Photonic Crystal Nanocomposite Elasticity on Crystalline Colloidal Array Particle Size. Macromolecules (2009) 0.76
UV resonance Raman investigation of the aqueous solvation dependence of primary amide vibrations. J Phys Chem B (2015) 0.76
Silica crystalline colloidal array deep ultraviolet narrow-band diffraction devices. Appl Spectrosc (2012) 0.76
Conformation of poly-L-glutamate is independent of ionic strength. Biophys Chem (2011) 0.76
Resonance Raman spectra of TNT and RDX using vibronic theory, excited-state gradient, and complex polarizability approximations. J Phys Chem A (2012) 0.76
Photonic crystal borax competitive binding carbohydrate sensing motif. Analyst (2009) 0.76
Colloidal crystal growth monitored by Bragg diffraction interference fringes. J Colloid Interface Sci (2010) 0.75
Charge stabilized crystalline colloidal arrays as templates for fabrication of non-close-packed inverted photonic crystals. J Colloid Interface Sci (2010) 0.75
Fabrication of Silica Shell Photonic Crystals through Flexible Core Templates. Chem Mater (2009) 0.75
Impact of ion binding on poly-L-lysine (un)folding energy landscape and kinetics. J Phys Chem B (2012) 0.75
Removable interpenetrating network enables highly-responsive 2-D photonic crystal hydrogel sensors. Analyst (2015) 0.75
Electrochemical investigation of Pb2+ binding and transport through a polymerized crystalline colloidal array hydrogel containing benzo-18-crown-6. Anal Chem (2005) 0.75
Two-dimensional photonic crystal sensors for visual detection of lectin concanavalin A. Anal Chem (2014) 0.75
Refractive-index matching avoids local field corrections and scattering bias in solid-state Na2SO4 ultraviolet Raman cross-section measurements. Appl Spectrosc (2012) 0.75
Responsive ionic liquid-polymer 2D photonic crystal gas sensors. Analyst (2014) 0.75
Simple nanosecond to minutes transient absorption spectrophotometer. Appl Spectrosc (2005) 0.75
Human Serum Phenylpyruvate Quantification using Responsive 2D Photonic Crystal Hydrogels via Chemoselective Oxime Ligation: Progress towards Developing Phenylalanine-Sensing Elements. ACS Appl Mater Interfaces (2020) 0.75
Emulsifier-free emulsion polymerization produces highly charged, monodisperse particles for near infrared photonic crystals. J Colloid Interface Sci (2002) 0.75
Two-dimensional photonic crystal surfactant detection. Anal Chem (2012) 0.75
Dependence of Raman and resonance Raman intensities on sample self-absorption. Appl Spectrosc (2014) 0.75
Langevin dynamics simulation of 3D colloidal crystal vacancies and phase transitions. J Phys Chem B (2013) 0.75
Compact Solid-State 213 nm Laser Enables Standoff Deep Ultraviolet Raman Spectrometer: Measurements of Nitrate Photochemistry. Appl Spectrosc (2015) 0.75
Asymmetric free-standing 2-D photonic crystal films and their Janus particles. J Am Chem Soc (2013) 0.75
Monodisperse, high refractive index, highly charged ZnS colloids self assemble into crystalline colloidal arrays. J Colloid Interface Sci (2010) 0.75
Solution and Solid Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) Ultraviolet (UV) 229 nm Photochemistry. Appl Spectrosc (2015) 0.75
Two-dimensional array Debye ring diffraction protein recognition sensing. Chem Commun (Camb) (2013) 0.75
Monomeric Polyglutamine Structures that Evolve into Fibrils. J Phys Chem B (2017) 0.75