Published in Genome Biol on June 10, 2010
Design and analysis of Bar-seq experiments. G3 (Bethesda) (2014) 1.48
A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol (2013) 1.32
Csi1 links centromeres to the nuclear envelope for centromere clustering. J Cell Biol (2012) 1.22
High-resolution network biology: connecting sequence with function. Nat Rev Genet (2013) 0.99
Global analysis of fission yeast mating genes reveals new autophagy factors. PLoS Genet (2013) 0.97
Genomic evidence for adaptation by gene duplication. Genome Res (2014) 0.90
Glucose activates TORC2-Gad8 protein via positive regulation of the cAMP/cAMP-dependent protein kinase A (PKA) pathway and negative regulation of the Pmk1 protein-mitogen-activated protein kinase pathway. J Biol Chem (2014) 0.86
A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe. Nucleic Acids Res (2011) 0.86
Identification of genes affecting the toxicity of anti-cancer drug bortezomib by genome-wide screening in S. pombe. PLoS One (2011) 0.86
Identification of novel genes involved in DNA damage response by screening a genome-wide Schizosaccharomyces pombe deletion library. BMC Genomics (2012) 0.85
Evasion of superinfection exclusion and elimination of primary viral RNA by an adapted strain of hepatitis C virus. J Virol (2013) 0.84
Genome-wide screening for genes associated with valproic acid sensitivity in fission yeast. PLoS One (2013) 0.83
Functional toxicology: tools to advance the future of toxicity testing. Front Genet (2014) 0.80
Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) (2014) 0.80
Fission yeast 26S proteasome mutants are multi-drug resistant due to stabilization of the Pap1 transcription factor. PLoS One (2012) 0.79
Multiple protein kinases influence the redistribution of fission yeast Clp1/Cdc14 phosphatase upon genotoxic stress. Mol Biol Cell (2012) 0.79
Predicting chemotherapeutic drug combinations through gene network profiling. Sci Rep (2016) 0.78
Genome-wide screens for sensitivity to ionizing radiation identify the fission yeast nonhomologous end joining factor Xrc4. G3 (Bethesda) (2014) 0.78
Transcriptional profiling analysis of individual kinase-deletion strains of fission yeast in response to nitrogen starvation. Mol Genet Genomics (2014) 0.78
Pli1(PIAS1) SUMO ligase protected by the nuclear pore-associated SUMO protease Ulp1SENP1/2. J Biol Chem (2015) 0.77
Differential regulation of the anti-crossover and replication fork regression activities of Mph1 by Mte1. Genes Dev (2016) 0.77
The Cell Killing Mechanisms of Hydroxyurea. Genes (Basel) (2016) 0.76
Inner nuclear membrane protein Lem2 facilitates Rad3-mediated checkpoint signaling under replication stress induced by nucleotide depletion in fission yeast. Cell Signal (2015) 0.76
Genome-wide functional analysis using the barcode sequence alignment and statistical analysis (Barcas) tool. BMC Bioinformatics (2016) 0.75
Hydroxyurea Induces Cytokinesis Arrest in Cells Expressing a Mutated Sterol-14α-Demethylase in the Ergosterol Biosynthesis Pathway. Genetics (2016) 0.75
Latrunculin A Induced Perturbation of the Actin Cytoskeleton Mediates Pap1p-Dependent Induction of the Caf5p Efflux Pump in Schizosaccharomyces pombe. G3 (Bethesda) (2016) 0.75
Global Fitness Profiling Identifies Arsenic and Cadmium Tolerance Mechanisms in Fission Yeast. G3 (Bethesda) (2016) 0.75
Big data mining powers fungal research: recent advances in fission yeast systems biology approaches. Curr Genet (2016) 0.75
Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science (1999) 36.25
Functional profiling of the Saccharomyces cerevisiae genome. Nature (2002) 36.10
Systematic genetic analysis with ordered arrays of yeast deletion mutants. Science (2001) 24.48
The genome sequence of Schizosaccharomyces pombe. Nature (2002) 14.26
AmiGO: online access to ontology and annotation data. Bioinformatics (2008) 10.77
The chemical genomic portrait of yeast: uncovering a phenotype for all genes. Science (2008) 8.52
Comparison of label-free methods for quantifying human proteins by shotgun proteomics. Mol Cell Proteomics (2005) 8.14
Identification of genetic variants using bar-coded multiplexed sequencing. Nat Methods (2008) 7.50
Sequence census methods for functional genomics. Nat Methods (2007) 7.38
Identifying genetic determinants needed to establish a human gut symbiont in its habitat. Cell Host Microbe (2009) 6.67
Small RNAs in transcriptional gene silencing and genome defence. Nature (2009) 5.98
Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy. Nat Genet (1996) 5.77
Integration of chemical-genetic and genetic interaction data links bioactive compounds to cellular target pathways. Nat Biotechnol (2003) 5.60
ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat Biotechnol (2006) 5.46
Quantitative phenotyping via deep barcode sequencing. Genome Res (2009) 5.13
Chemogenomic profiling: identifying the functional interactions of small molecules in yeast. Proc Natl Acad Sci U S A (2004) 5.10
Genomic profiling of drug sensitivities via induced haploinsufficiency. Nat Genet (1999) 5.06
Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology. Nucleic Acids Res (2008) 5.00
Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms. Nat Methods (2009) 4.91
Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes. Cell (2004) 4.91
A robust toolkit for functional profiling of the yeast genome. Mol Cell (2004) 4.69
Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat Biotechnol (2010) 4.26
DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray. Nat Genet (2003) 4.14
Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants. Genome Res (2009) 4.12
The best yeast? Trends Genet (1999) 3.65
Targeted high-throughput sequencing of tagged nucleic acid samples. Nucleic Acids Res (2007) 3.56
RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast. Proc Natl Acad Sci U S A (2002) 3.52
Detecting differential and correlated protein expression in label-free shotgun proteomics. J Proteome Res (2006) 3.51
RNA interference is required for normal centromere function in fission yeast. Chromosome Res (2003) 3.46
Basic methods for fission yeast. Yeast (2006) 3.37
Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung. Proc Natl Acad Sci U S A (2009) 3.35
Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments. Nucleic Acids Res (2003) 3.35
Lineage-specific loss and divergence of functionally linked genes in eukaryotes. Proc Natl Acad Sci U S A (2000) 3.27
A long twentieth century of the cell cycle and beyond. Cell (2000) 3.21
Mutations in the fission yeast silencing factors clr4+ and rik1+ disrupt the localisation of the chromo domain protein Swi6p and impair centromere function. J Cell Sci (1996) 2.73
DNA topoisomerase I inhibitors: chemistry, biology, and interfacial inhibition. Chem Rev (2009) 2.65
Dial 9-1-1 for DNA damage: the Rad9-Hus1-Rad1 (9-1-1) clamp complex. DNA Repair (Amst) (2004) 2.55
A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds. Nat Biotechnol (2009) 2.49
Genome-wide analysis of barcoded Saccharomyces cerevisiae gene-deletion mutants in pooled cultures. Nat Protoc (2007) 2.36
Genome-wide requirements for resistance to functionally distinct DNA-damaging agents. PLoS Genet (2005) 2.32
Evidence that DNA topoisomerase I is necessary for the cytotoxic effects of camptothecin. Mol Pharmacol (1988) 1.95
Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity. Cell (2010) 1.82
The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae. Proc Natl Acad Sci U S A (2000) 1.81
Characterization of synthetic DNA bar codes in Saccharomyces cerevisiae gene-deletion strains. Proc Natl Acad Sci U S A (2004) 1.79
Two related kinesins, klp5+ and klp6+, foster microtubule disassembly and are required for meiosis in fission yeast. Mol Biol Cell (2001) 1.77
Postreplication repair and PCNA modification in Schizosaccharomyces pombe. Mol Biol Cell (2006) 1.57
Fission yeast mutants that alleviate transcriptional silencing in centromeric flanking repeats and disrupt chromosome segregation. Genetics (1999) 1.55
Gene Ontology annotation status of the fission yeast genome: preliminary coverage approaches 100%. Yeast (2006) 1.48
Fission yeast Ccq1 is telomerase recruiter and local checkpoint controller. Genes Dev (2008) 1.47
Mechanisms of resistance to topoisomerase I-targeting drugs. Oncogene (2003) 1.39
Silent chromatin at the middle and ends: lessons from yeasts. EMBO J (2009) 1.36
The uses of genome-wide yeast mutant collections. Genome Biol (2004) 1.36
Basic mechanism of eukaryotic chromosome segregation. Philos Trans R Soc Lond B Biol Sci (2005) 1.26
Fission yeast kinesin-8 Klp5 and Klp6 are interdependent for mitotic nuclear retention and required for proper microtubule dynamics. Mol Biol Cell (2008) 1.24
Screening a genome-wide S. pombe deletion library identifies novel genes and pathways involved in genome stability maintenance. DNA Repair (Amst) (2009) 1.21
Yeast chemical genomics and drug discovery: an update. Trends Pharmacol Sci (2008) 1.17
Mitochondrial dysfunction increases oxidative stress and decreases chronological life span in fission yeast. PLoS One (2008) 1.17
The bipartite structure of the tRNA m1A58 methyltransferase from S. cerevisiae is conserved in humans. RNA (2005) 1.14
Identification of genes encoding putative nucleoporins and transport factors in the fission yeast Schizosaccharomyces pombe: a deletion analysis. Yeast (2004) 1.08
RNA interference: roles in fungal biology. Curr Opin Microbiol (2008) 1.07
Repair of UV damage in the fission yeast Schizosaccharomyces pombe. Mutat Res (2000) 1.03
Full transcriptome analysis of rhabdomyosarcoma, normal, and fetal skeletal muscle: statistical comparison of multiple SAGE libraries. FASEB J (2005) 0.95
Lysine biosynthesis pathway and biochemical blocks of lysine auxotrophs of Schizosaccharomyces pombe. J Bacteriol (1988) 0.92
Cell division defects of Schizosaccharomyces pombe liz1- mutants are caused by defects in pantothenate uptake. Eukaryot Cell (2004) 0.91
Comparison of a coq7 deletion mutant with other respiration-defective mutants in fission yeast. FEBS J (2008) 0.88
Liz1p, a novel fission yeast membrane protein, is required for normal cell division when ribonucleotide reductase is inhibited. Mol Biol Cell (1999) 0.85
Chemogenomic approaches to elucidation of gene function and genetic pathways. Methods Mol Biol (2009) 0.81
Growth and storage of YAC clones in Hogness Freezing Medium. Nucleic Acids Res (1997) 0.78
Genomic approaches for identifying DNA damage response pathways in S. cerevisiae. Methods Enzymol (2006) 0.78
Intergenic variants of HBS1L-MYB are responsible for a major quantitative trait locus on chromosome 6q23 influencing fetal hemoglobin levels in adults. Proc Natl Acad Sci U S A (2007) 3.10
Suppression of autophagy by FIP200 deletion inhibits mammary tumorigenesis. Genes Dev (2011) 3.05
Conditional knockout of focal adhesion kinase in endothelial cells reveals its role in angiogenesis and vascular development in late embryogenesis. J Cell Biol (2005) 2.75
Histone H2A phosphorylation controls Crb2 recruitment at DNA breaks, maintains checkpoint arrest, and influences DNA repair in fission yeast. Mol Cell Biol (2004) 2.20
Swi1 prevents replication fork collapse and controls checkpoint kinase Cds1. Mol Cell Biol (2003) 2.19
Role of FIP200 in cardiac and liver development and its regulation of TNFalpha and TSC-mTOR signaling pathways. J Cell Biol (2006) 2.12
Cool-1 functions as an essential regulatory node for EGF receptor- and Src-mediated cell growth. Nat Cell Biol (2006) 2.04
Protection of telomeres by a conserved Stn1-Ten1 complex. Proc Natl Acad Sci U S A (2007) 1.71
The Scottish Structural Proteomics Facility: targets, methods and outputs. J Struct Funct Genomics (2010) 1.66
A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus. Mol Microbiol (2013) 1.58
AFV1, a novel virus infecting hyperthermophilic archaea of the genus acidianus. Virology (2003) 1.56
Systematic deletion analysis of fission yeast protein kinases. Eukaryot Cell (2005) 1.51
Role of kinase-independent and -dependent functions of FAK in endothelial cell survival and barrier function during embryonic development. J Cell Biol (2010) 1.44
Neural-specific deletion of FIP200 leads to cerebellar degeneration caused by increased neuronal death and axon degeneration. J Biol Chem (2009) 1.38
Mechanism of cell cycle regulation by FIP200 in human breast cancer cells. Cancer Res (2005) 1.36
Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism. Environ Microbiol (2009) 1.27
Mammary epithelial-specific deletion of the focal adhesion kinase gene leads to severe lobulo-alveolar hypoplasia and secretory immaturity of the murine mammary gland. J Biol Chem (2007) 1.26
Morphology and genome organization of the virus PSV of the hyperthermophilic archaeal genera Pyrobaculum and Thermoproteus: a novel virus family, the Globuloviridae. Virology (2004) 1.23
Adipose subtype-selective recruitment of TLE3 or Prdm16 by PPARγ specifies lipid storage versus thermogenic gene programs. Cell Metab (2013) 1.22
Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus. Nucleic Acids Res (2011) 1.16
A novel rudivirus, ARV1, of the hyperthermophilic archaeal genus Acidianus. Virology (2005) 1.16
Cooperative control of Crb2 by ATM family and Cdc2 kinases is essential for the DNA damage checkpoint in fission yeast. Mol Cell Biol (2005) 1.13
The landscape of accessible chromatin in mammalian preimplantation embryos. Nature (2016) 1.13
Investigating the role of P311 in the hypertrophic scar. PLoS One (2010) 1.10
Modulation of cell cycle-specific gene expressions at the onset of S phase arrest contributes to the robust DNA replication checkpoint response in fission yeast. Mol Biol Cell (2007) 1.08
Differential roles of the C and N termini of Orai1 protein in interacting with stromal interaction molecule 1 (STIM1) for Ca2+ release-activated Ca2+ (CRAC) channel activation. J Biol Chem (2013) 1.06
Rad22Rad52-dependent repair of ribosomal DNA repeats cleaved by Slx1-Slx4 endonuclease. Mol Biol Cell (2006) 1.05
Identification of poly (ADP-ribose) polymerase-1 (PARP-1) as a novel Kruppel-like factor 8-interacting and -regulating protein. J Biol Chem (2011) 1.05
Vitamin D receptor activation protects against myocardial reperfusion injury through inhibition of apoptosis and modulation of autophagy. Antioxid Redox Signal (2015) 1.01
Ultrathin two-dimensional MnO2/graphene hybrid nanostructures for high-performance, flexible planar supercapacitors. Nano Lett (2013) 1.01
Mapping genomic hotspots of DNA damage by a single-strand-DNA-compatible and strand-specific ChIP-seq method. Genome Res (2012) 1.01
Two-dimensional vanadyl phosphate ultrathin nanosheets for high energy density and flexible pseudocapacitors. Nat Commun (2013) 1.00
Familial relationships in hyperthermo- and acidophilic archaeal viruses. J Virol (2010) 1.00
Krüppel-like factor 8 promotes tumorigenic mammary stem cell induction by targeting miR-146a. Am J Cancer Res (2013) 0.99
BRCT domain interactions with phospho-histone H2A target Crb2 to chromatin at double-strand breaks and maintain the DNA damage checkpoint. Mol Cell Biol (2010) 0.98
Curcumin protects mitochondria from oxidative damage and attenuates apoptosis in cortical neurons. Acta Pharmacol Sin (2004) 0.98
Both ERK/MAPK and TGF-Beta/Smad signaling pathways play a role in the kidney fibrosis of diabetic mice accelerated by blood glucose fluctuation. J Diabetes Res (2013) 0.97
Activation of the Ran GTPase is subject to growth factor regulation and can give rise to cellular transformation. J Biol Chem (2009) 0.97
Global analysis of fission yeast mating genes reveals new autophagy factors. PLoS Genet (2013) 0.97
A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replication. J Virol (2010) 0.96
Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells. RNA Biol (2013) 0.95
Comparative Metagenomics of Eight Geographically Remote Terrestrial Hot Springs. Microb Ecol (2015) 0.93
Isolation of cardiac myocytes and fibroblasts from neonatal rat pups. Methods Mol Biol (2012) 0.93
Characterization of 23 CC chemokine genes and analysis of their expression in channel catfish (Ictalurus punctatus). Dev Comp Immunol (2005) 0.93
Structure of the acidianus filamentous virus 3 and comparative genomics of related archaeal lipothrixviruses. J Virol (2007) 0.92
Viral diversity in hot springs of Pozzuoli, Italy, and characterization of a unique archaeal virus, Acidianus bottle-shaped virus, from a new family, the Ampullaviridae. J Virol (2005) 0.92
Arthroscopic treatment of chronically painful calcific tendinitis of the rectus femoris. Eur J Med Res (2013) 0.91
Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1. Mol Microbiol (2008) 0.90
Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophiles. Environ Microbiol (2010) 0.89
Nematode sperm maturation triggered by protease involves sperm-secreted serine protease inhibitor (Serpin). Proc Natl Acad Sci U S A (2012) 0.89
Deletion of Cdc42 enhances ADAM17-mediated vascular endothelial growth factor receptor 2 shedding and impairs vascular endothelial cell survival and vasculogenesis. Mol Cell Biol (2013) 0.87
A proteome-wide visual screen identifies fission yeast proteins localizing to DNA double-strand breaks. DNA Repair (Amst) (2013) 0.86
A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe. Nucleic Acids Res (2011) 0.86
Viruses in acidic geothermal environments of the Kamchatka Peninsula. Res Microbiol (2008) 0.86
Multiple end joining mechanisms repair a chromosomal DNA break in fission yeast. DNA Repair (Amst) (2011) 0.84
Isolation and characterization of vascular endothelial cells from murine heart and lung. Methods Mol Biol (2012) 0.84
Inactivation of Cdc42 in neural crest cells causes craniofacial and cardiovascular morphogenesis defects. Dev Biol (2013) 0.84
Phosphorylation-dependent interactions between Crb2 and Chk1 are essential for DNA damage checkpoint. PLoS Genet (2012) 0.83
Catfish CC chemokines: genomic clustering, duplications, and expression after bacterial infection with Edwardsiella ictaluri. Mol Genet Genomics (2005) 0.83
Spatiotemporal sequestration of miR165/166 by Arabidopsis Argonaute10 promotes shoot apical meristem maintenance. Cell Rep (2015) 0.81
Adult ciliary epithelial stem cells generate functional neurons and differentiate into both early and late born retinal neurons under non-cell autonomous influences. BMC Neurosci (2013) 0.81
Serotypes, virulence genes, and antimicrobial susceptibility of Escherichia coli isolates from pigs. Foodborne Pathog Dis (2011) 0.80
Genome sequence of a novel archaeal fusellovirus assembled from the metagenome of a mexican hot spring. Genome Announc (2013) 0.80
Prevalence of serogroups, virulence genotypes, antimicrobial resistance, and phylogenetic background of avian pathogenic Escherichia coli in south of China. Foodborne Pathog Dis (2010) 0.79
Genome sequence of a novel archaeal rudivirus recovered from a mexican hot spring. Genome Announc (2013) 0.78
A genome-wide screen for Schizosaccharomyces pombe deletion mutants that affect telomere length. Cell Res (2010) 0.78
SNP haplotype tagging from DNA pools of two individuals. BMC Bioinformatics (2003) 0.78
Relationship between sample loading amount and peptide identification and its effects on quantitative proteomics. Anal Chem (2009) 0.78
[Effect of ginsenoside Rg1 on expression of p21, cyclin E and CDK2 in the process of cell senescence]. Yao Xue Xue Bao (2004) 0.77
In utero assessment of cardiovascular function in the embryonic mouse heart using high-resolution ultrasound biomicroscopy. Methods Mol Biol (2012) 0.77
Effects of a chemically derived homo zwitterionic polysaccharide on immune activation in mice. Acta Biochim Biophys Sin (Shanghai) (2009) 0.77
Indirect immunostaining on mouse embryonic heart for the detection of proliferated cardiomyocyte. Methods Mol Biol (2012) 0.76
Histone H3 K27 acetylation marks a potent enhancer element on the adipogenic master regulator gene Pparg2. Cell Cycle (2014) 0.76
Activated focal adhesion kinase involved in adhesion and migration of vascular smooth muscle cells stimulated by fibronectin. Chin Med J (Engl) (2002) 0.76
piggyBac transposon-based insertional mutagenesis for the fission yeast Schizosaccharomyces pombe. Methods Mol Biol (2014) 0.76
A novel recombinant immunotoxin with the smallest ribosome-inactivating protein Luffin P1: T-cell cytotoxicity and prolongation of allograft survival. J Cell Mol Med (2009) 0.75
Embryonic porcine skin precursors can successfully develop into integrated skin without teratoma formation posttransplantation in nude mouse model. PLoS One (2010) 0.75
N-terminal pro-B-type natriuretic peptide is associated with severity of the coronary lesions in unstable angina patients with preserved left ventricular function. J Interv Cardiol (2011) 0.75
[Focal adhesion kinase and mitogen activated protein kinase are involved in vascular smooth muscle cells migration and proliferation stimulated by fibronectin]. Zhonghua Yi Xue Za Zhi (2002) 0.75
The first Sino-German Symposium on DNA Repair and Human Diseases. DNA Repair (Amst) (2011) 0.75
[Rheumatoid forefoot reconstruction with first metatarsophalangeal fusion and arthroplasty of lesser metatarsal heads]. Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi (2012) 0.75
Surgical Incision and Approach in Thoracolumbar Extreme Lateral Interbody Fusion Surgery: An Anatomic Study of the Diaphragmatic Attachments. Spine (Phila Pa 1976) (2016) 0.75
[FAK antisense oligodeoxynucleotides inhibit vascular smooth muscle cell migration and adhesion mediated by FAK-ERK1/2 signaling pathway]. Yao Xue Xue Bao (2002) 0.75
Visualization of mouse embryo angiogenesis by fluorescence-based staining. Methods Mol Biol (2012) 0.75