Published in Biophys J on July 21, 2010
Secondary structure formation of homopolymeric single-stranded nucleic acids including force and loop entropy: implications for DNA hybridization. Eur Phys J E Soft Matter (2011) 0.79
Mesoscopic models for DNA stretching under force: New results and comparison with experiments. Eur Phys J E Soft Matter (2012) 0.77
Elasticity of DNA and the effect of dendrimer binding. Eur Phys J E Soft Matter (2013) 0.75
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc Natl Acad Sci U S A (1998) 24.28
Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules. Science (1996) 18.53
DNA: an extensible molecule. Science (1996) 8.19
Ionic effects on the elasticity of single DNA molecules. Proc Natl Acad Sci U S A (1997) 6.20
Sequence-dependent mechanics of single DNA molecules. Nat Struct Biol (1999) 5.72
Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy. Biophys J (2004) 3.69
Mechanical stability of single DNA molecules. Biophys J (2000) 3.40
Force-induced melting of the DNA double helix 1. Thermodynamic analysis. Biophys J (2001) 3.03
Stretching DNA with a receding meniscus: Experiments and models. Phys Rev Lett (1995) 2.93
Modelling extreme stretching of DNA. Nucleic Acids Res (1996) 2.69
Salt dependence of the elasticity and overstretching transition of single DNA molecules. Biophys J (2002) 2.39
Theory of high-force DNA stretching and overstretching. Phys Rev E Stat Nonlin Soft Matter Phys (2003) 2.28
DNA stretching and compression: large-scale simulations of double helical structures. J Mol Biol (1999) 2.07
Entropy and heat capacity of DNA melting from temperature dependence of single molecule stretching. Biophys J (2001) 1.99
Unraveling the structure of DNA during overstretching by using multicolor, single-molecule fluorescence imaging. Proc Natl Acad Sci U S A (2009) 1.95
Polymer network of fixed topology: Renormalization, exact critical exponent gamma in two dimensions, and D=4- epsilon. Phys Rev Lett (1986) 1.93
Stretching single stranded DNA, a model polyelectrolyte. Phys Rev Lett (2002) 1.90
Overstretching and force-driven strand separation of double-helix DNA. Phys Rev E Stat Nonlin Soft Matter Phys (2004) 1.82
DNA overstretching in the presence of glyoxal: structural evidence of force-induced DNA melting. Biophys J (2008) 1.45
Elasticity theory of the B-DNA to S-DNA transition. Biophys J (1998) 1.44
Statistical mechanical simulation of polymeric DNA melting with MELTSIM. Bioinformatics (1999) 1.33
Reparametrizing the loop entropy weights: effect on DNA melting curves. Phys Rev E Stat Nonlin Soft Matter Phys (2003) 1.17
There and (slowly) back again: entropy-driven hysteresis in a model of DNA overstretching. Biophys J (2007) 1.17
Phase transitions in one dimension and the helix-coil transition in polyamino acids. J Chem Phys (1966) 1.16
Hyperfine structure in melting profile of bacteriophage lambda DNA. Biopolymers (1976) 1.15
Occurrence of a phase transition in nucleic acid models. J Chem Phys (1966) 1.15
Highly stretched single polymers: atomic-force-microscope experiments versus ab-initio theory. Phys Rev Lett (2005) 1.08
Structure and energy of a DNA dodecamer under tensile load. Nucleic Acids Res (2005) 1.04
Roles of stiffness and excluded volume in DNA denaturation. Phys Rev Lett (2002) 1.00
Force-driven separation of short double-stranded DNA. Biophys J (2009) 0.89
Impact of loop statistics on the thermodynamics of RNA folding. Phys Rev Lett (2008) 0.88
Generalized Poland-Scheraga model for DNA hybridization. Biopolymers (2004) 0.88
A semiflexible chain model of local denaturation in double-stranded DNA. J Chem Phys (2006) 0.86
Loop dynamics in DNA denaturation. Phys Rev Lett (2007) 0.84
Denaturation transition of stretched DNA. Phys Rev Lett (2008) 0.84
Overstretching of a 30 bp DNA duplex studied with steered molecular dynamics simulation: effects of structural defects on structure and force-extension relation. Eur Phys J E Soft Matter (2009) 0.80
Thermal denaturation of fluctuating DNA driven by bending entropy. Phys Rev Lett (2007) 0.79
Effect of external stress on the thermal melting of DNA. Phys Rev E Stat Nonlin Soft Matter Phys (2008) 0.76
Melting of persistent double-stranded polymers. Phys Rev E Stat Nonlin Soft Matter Phys (2008) 0.76
Cell flow reorients the axis of planar polarity in the wing epithelium of Drosophila. Cell (2010) 3.57
Molecular origin of fast water transport in carbon nanotube membranes: superlubricity versus curvature dependent friction. Nano Lett (2010) 1.69
Rational design of ion force fields based on thermodynamic solvation properties. J Chem Phys (2009) 1.17
Water slippage versus contact angle: a quasiuniversal relationship. Phys Rev Lett (2008) 1.14
Interfacial water at hydrophobic and hydrophilic surfaces: slip, viscosity, and diffusion. Langmuir (2009) 1.13
Highly stretched single polymers: atomic-force-microscope experiments versus ab-initio theory. Phys Rev Lett (2005) 1.08
Peptide chain dynamics in light and heavy water: zooming in on internal friction. J Am Chem Soc (2012) 1.07
Poisson-Boltzmann theory for membranes with mobile charged lipids and the pH-dependent interaction of a DNA molecule with a membrane. Biophys J (2002) 1.05
Interfacial water at hydrophobic and hydrophilic surfaces: depletion versus adsorption. Langmuir (2007) 0.97
Auto- and cross-power spectral analysis of dual trap optical tweezer experiments using Bayesian inference. Rev Sci Instrum (2012) 0.96
Pumping fluids with periodically beating grafted elastic filaments. Phys Rev Lett (2006) 0.96
Counterions at charged cylinders: criticality and universality beyond mean-field theory. Phys Rev Lett (2005) 0.95
Specific ion adsorption at hydrophobic solid surfaces. Phys Rev Lett (2007) 0.95
Hydration repulsion between biomembranes results from an interplay of dehydration and depolarization. Proc Natl Acad Sci U S A (2012) 0.95
Ion-specific thermodynamics of multicomponent electrolytes: a hybrid HNC/MD approach. J Chem Phys (2009) 0.92
Scaling and universality in the counterion-condensation transition at charged cylinders. Phys Rev E Stat Nonlin Soft Matter Phys (2006) 0.91
Deconvolution of dynamic mechanical networks. Proc Natl Acad Sci U S A (2010) 0.91
Viscous friction of hydrogen-bonded matter. J Am Chem Soc (2011) 0.90
Dielectric profile of interfacial water and its effect on double-layer capacitance. Phys Rev Lett (2011) 0.90
Impact of loop statistics on the thermodynamics of RNA folding. Phys Rev Lett (2008) 0.88
Unraveling the combined effects of dielectric and viscosity profiles on surface capacitance, electro-osmotic mobility, and electric surface conductivity. Langmuir (2012) 0.88
Water at hydrophobic substrates: curvature, pressure, and temperature effects. Langmuir (2004) 0.88
Propulsion with a rotating elastic nanorod. Phys Rev Lett (2006) 0.88
Can simulations quantitatively predict peptide transfer free energies to urea solutions? Thermodynamic concepts and force field limitations. J Phys Chem A (2011) 0.87
Electrohydraulic power conversion in planar nanochannels. Phys Rev Lett (2009) 0.87
Hydrodynamic screening near planar boundaries: effects on semiflexible polymer dynamics. J Chem Phys (2011) 0.87
Model for self-propulsive helical filaments: kink-pair propagation. Phys Rev Lett (2007) 0.86
Anomalous anisotropic diffusion dynamics of hydration water at lipid membranes. Phys Rev Lett (2013) 0.86
Molecular hydrophobic attraction and ion-specific effects studied by molecular dynamics. Langmuir (2008) 0.86
Reversed anionic Hofmeister series: the interplay of surface charge and surface polarity. Langmuir (2010) 0.86
Polypeptide friction and adhesion on hydrophobic and hydrophilic surfaces: a molecular dynamics case study. J Am Chem Soc (2008) 0.86
Dissimilar kinetic behavior of electrically manipulated single- and double-stranded DNA tethered to a gold surface. Biophys J (2006) 0.86
Critical percolation phase and thermal Berezinskii-Kosterlitz-Thouless transition in a scale-free network with short-range and long-range random bonds. Phys Rev E Stat Nonlin Soft Matter Phys (2009) 0.85
Internal friction and nonequilibrium unfolding of polymeric globules. Phys Rev Lett (2009) 0.85
Anionic and cationic Hofmeister effects on hydrophobic and hydrophilic surfaces. Langmuir (2013) 0.84
Counterion density profiles at charged flexible membranes. Phys Rev Lett (2005) 0.84
Ionic force field optimization based on single-ion and ion-pair solvation properties. J Chem Phys (2010) 0.84
Size dependence of steric shielding and multivalency effects for globular binding inhibitors. J Am Chem Soc (2015) 0.83
Nanoscale pumping of water by AC electric fields. Nano Lett (2012) 0.83
Peptide desorption kinetics from single molecule force spectroscopy studies. J Am Chem Soc (2014) 0.83
Force fields for divalent cations based on single-ion and ion-pair properties. J Chem Phys (2013) 0.83
Salt-induced counterion-mobility anomaly in polyelectrolyte electrophoresis. Phys Rev Lett (2008) 0.83
Theory and simulations of water flow through carbon nanotubes: prospects and pitfalls. J Phys Condens Matter (2011) 0.83
Confinement-dependent friction in peptide bundles. Biophys J (2013) 0.82
Ionic force field optimization based on single-ion and ion-pair solvation properties: going beyond standard mixing rules. J Chem Phys (2012) 0.81
Spatial correlations of density and structural fluctuations in liquid water: a comparative simulation study. J Am Chem Soc (2011) 0.81
On the relationship between peptide adsorption resistance and surface contact angle: a combined experimental and simulation single-molecule study. J Am Chem Soc (2012) 0.81
Salt-modulated structure of polyelectrolyte-macroion complex fibers. Eur Phys J E Soft Matter (2011) 0.80
Water at polar and nonpolar solid walls. Biointerphases (2008) 0.80
Nanoroughness, intrinsic density profile, and rigidity of the air-water interface. Phys Rev Lett (2009) 0.80
Profile of the static permittivity tensor of water at interfaces: consequences for capacitance, hydration interaction and ion adsorption. Langmuir (2012) 0.80
Low-frequency collective exchange mode in the dielectric spectrum of salt-free dilute polyelectrolyte solutions. Eur Phys J E Soft Matter (2013) 0.80
Specific ion binding to carboxylic surface groups and the pH dependence of the Hofmeister series. Langmuir (2014) 0.79
Hydration interaction between phospholipid membranes: insight into different measurement ensembles from atomistic molecular dynamics simulations. Langmuir (2013) 0.79
Hydrodynamics of helical-shaped bacterial motility. Phys Rev E Stat Nonlin Soft Matter Phys (2009) 0.79
Solvation thermodynamics and heat capacity of polar and charged solutes in water. J Chem Phys (2013) 0.79
The spontaneous curvature of the water-hydrophobe interface. J Chem Phys (2012) 0.79
Electro-osmosis at inhomogeneous charged surfaces: hydrodynamic versus electric friction. J Chem Phys (2006) 0.78
Ultralow liquid/solid friction in carbon nanotubes: comprehensive theory for alcohols, alkanes, OMCTS, and water. Langmuir (2012) 0.78
Effective interaction between two ion-adsorbing plates: Hofmeister series and salting-in/salting-out phase diagrams from a global mean-field analysis. Langmuir (2012) 0.78
Entropy and enthalpy convergence of hydrophobic solvation beyond the hard-sphere limit. J Chem Phys (2011) 0.78
Anomalous polymer sedimentation far from equilibrium. Phys Rev Lett (2007) 0.77
FVIII binding to PS membranes differs in the activated and non-activated form and can be shielded by annexin A5. J Phys Chem B (2011) 0.77
Electrokinetics at aqueous interfaces without mobile charges. Langmuir (2010) 0.77
Beyond the continuum: how molecular solvent structure affects electrostatics and hydrodynamics at solid-electrolyte interfaces. J Phys Chem B (2013) 0.76
Pulling a single polymer molecule off a substrate reveals the binding thermodynamics of cosolutes. Angew Chem Int Ed Engl (2010) 0.76
The effect of temperature on single-polypeptide adsorption. Chemphyschem (2012) 0.76
DNA-protein binding rates: bending fluctuation and hydrodynamic coupling effects. J Chem Phys (2010) 0.76
Insight into the molecular mechanisms of protein stabilizing osmolytes from global force-field variations. J Phys Chem B (2013) 0.76
Anisotropy in the dielectric spectrum of hydration water and its relation to water dynamics. J Chem Phys (2012) 0.75
Theory for RNA folding, stretching, and melting including loops and salt. Biophys J (2011) 0.75
End-monomer Dynamics in Semiflexible Polymers. Macromolecules (2009) 0.75
[Cell flow reorients planar polarity in the wing of Drosophila]. Med Sci (Paris) (2011) 0.75
Hydration Repulsion Difference Between Ordered and Disordered Membranes Due to Cancellation of Membrane-Membrane and Water-Mediated Interactions. J Phys Chem Lett (2017) 0.75
Probing structural and dynamical transitions in polymer globules by force. Phys Rev E Stat Nonlin Soft Matter Phys (2011) 0.75
Effective screening length and quasiuniversality for the restricted primitive model of an electrolyte solution. J Chem Phys (2009) 0.75
Elasticity of DNA and the effect of dendrimer binding. Eur Phys J E Soft Matter (2013) 0.75
Nanometer-resolved radio-frequency absorption and heating in biomembrane hydration layers. J Phys Chem B (2014) 0.75
Unraveling the Origin of the Apparent Charge of Zwitterionic Lipid Layers. J Phys Chem Lett (2019) 0.75
Friction contribution to water-bond breakage kinetics. Phys Rev E Stat Nonlin Soft Matter Phys (2011) 0.75
Convolution theory for dynamic systems: a bottom-up approach to the viscoelasticity of polymeric networks. Eur Phys J E Soft Matter (2013) 0.75
Influence of hydrogen bonding on the structure of the (001) corundum-water interface. Density functional theory calculations and Monte Carlo simulations. Langmuir (2014) 0.75
Confinement and compression of an oligomer brush. Biointerphases (2010) 0.75
Ion-specific solvation water dynamics: single water versus collective water effects. J Phys Chem A (2014) 0.75
Spatial screening of hemagglutinin on Influenza A virus particles: Sialyl-LacNAc displays on DNA and PEG scaffolds reveal the requirements for bivalency enhanced interactions with weak monovalent binders. J Am Chem Soc (2017) 0.75
Hydration Effects Turn a Highly Stretched Polymer from an Entropic into an Energetic Spring. ACS Nano (2016) 0.75