PubRank

Eugénio C Ferreira

Author PubWeight™ 23.35‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Modeling formalisms in Systems Biology. AMB Express 2011 1.61
2 OptFlux: an open-source software platform for in silico metabolic engineering. BMC Syst Biol 2010 1.61
3 Molecular aspects and comparative genomics of bacteriophage endolysins. J Virol 2013 1.25
4 Natural computation meta-heuristics for the in silico optimization of microbial strains. BMC Bioinformatics 2008 1.20
5 Genomic and proteomic characterization of the broad-host-range Salmonella phage PVP-SE1: creation of a new phage genus. J Virol 2011 1.17
6 The use of antibiotics to improve phage detection and enumeration by the double-layer agar technique. BMC Microbiol 2009 1.02
7 Metabolic responses to recombinant bioprocesses in Escherichia coli. J Biotechnol 2012 0.99
8 Random sampling of elementary flux modes in large-scale metabolic networks. Bioinformatics 2012 0.94
9 Identification of metabolic engineering targets through analysis of optimal and sub-optimal routes. PLoS One 2013 0.89
10 @Note: a workbench for biomedical text mining. J Biomed Inform 2009 0.89
11 Hybrid dynamic modeling of Escherichia coli central metabolic network combining Michaelis-Menten and approximate kinetic equations. Biosystems 2010 0.86
12 Metabolic footprint analysis of recombinant Escherichia coli strains during fed-batch fermentations. Mol Biosyst 2010 0.85
13 Development of a method using image analysis for the measurement of cellulose-binding domains adsorbed onto cellulose fibers. Biotechnol Prog 2007 0.81
14 Activated sludge characterization through microscopy: a review on quantitative image analysis and chemometric techniques. Anal Chim Acta 2013 0.80
15 Challenges in integrating Escherichia coli molecular biology data. Brief Bioinform 2010 0.80
16 Genome-wide metabolic (re-) annotation of Kluyveromyces lactis. BMC Genomics 2012 0.80
17 Quantification of the CBD-FITC conjugates surface coating on cellulose fibres. BMC Biotechnol 2008 0.79
18 iOD907, the first genome-scale metabolic model for the milk yeast Kluyveromyces lactis. Biotechnol J 2014 0.79
19 Exploring the gap between dynamic and constraint-based models of metabolism. Metab Eng 2012 0.79
20 Quantitative monitoring of an activated sludge reactor using on-line UV-visible and near-infrared spectroscopy. Anal Bioanal Chem 2009 0.79
21 Genome-wide metabolic re-annotation of Ashbya gossypii: new insights into its metabolism through a comparative analysis with Saccharomyces cerevisiae and Kluyveromyces lactis. BMC Genomics 2014 0.78
22 Assessment of physiological conditions in E. coli fermentations by epifluorescent microscopy and image analysis. Biotechnol Prog 2009 0.77
23 Semantic annotation of biological concepts interplaying microbial cellular responses. BMC Bioinformatics 2011 0.76
24 Prediction of intracellular storage polymers using quantitative image analysis in enhanced biological phosphorus removal systems. Anal Chim Acta 2013 0.76
25 Correction: Population Dynamics of a Salmonella Lytic Phage and Its Host: Implications of the Host Bacterial Growth Rate in Modelling. PLoS One 2015 0.75
26 A study of the short and long-term regulation of E. coli metabolic pathways. J Integr Bioinform 2011 0.75
27 Kinetic and stoichiometric parameters estimation in a nitrifying bubble column through "in-situ" pulse respirometry. Biotechnol Bioeng 2008 0.75
28 Determination of diffusion coefficients of glycerol and glucose from starch based thermoplastic compounds on simulated physiological solution. J Mater Sci Mater Med 2005 0.75
29 Image analysis technique as a tool to identify morphological changes in Trametes versicolor pellets according to exopolysaccharide or laccase production. Appl Biochem Biotechnol 2013 0.75
30 Automatic identification of activated sludge disturbances and assessment of operational parameters. Chemosphere 2013 0.75
31 Image analysis application for the study of activated sludge floc size during the treatment of synthetic and real fishery wastewaters. Environ Sci Pollut Res Int 2011 0.75