Published in Plant Physiol on January 13, 2011
Interplay between sucrose and folate modulates auxin signaling in Arabidopsis. Plant Physiol (2013) 0.92
The mitochondrial folylpolyglutamate synthetase gene is required for nitrogen utilization during early seedling development in arabidopsis. Plant Physiol (2012) 0.85
The essential role of the phosphorylated pathway of serine biosynthesis in Arabidopsis. Plant Signal Behav (2013) 0.82
The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase. Plant J (2015) 0.81
Folate polyglutamylation is involved in chromatin silencing by maintaining global DNA methylation and histone H3K9 dimethylation in Arabidopsis. Plant Cell (2013) 0.81
Loss of function of folylpolyglutamate synthetase 1 reduces lignin content and improves cell wall digestibility in Arabidopsis. Biotechnol Biofuels (2015) 0.80
Arabidopsis plastidial folylpolyglutamate synthetase is required for seed reserve accumulation and seedling establishment in darkness. PLoS One (2014) 0.80
MTHFD1 controls DNA methylation in Arabidopsis. Nat Commun (2016) 0.78
Identification of Polymorphisms Associated with Drought Adaptation QTL in Brassica napus by Resequencing. G3 (Bethesda) (2016) 0.76
The plastidial folylpolyglutamate synthetase and root apical meristem maintenance. Plant Signal Behav (2011) 0.76
Expression of S-adenosylmethionine Hydrolase in Tissues Synthesizing Secondary Cell Walls Alters Specific Methylated Cell Wall Fractions and Improves Biomass Digestibility. Front Bioeng Biotechnol (2016) 0.75
Experimental and Metabolic Modeling Evidence for a Folate-Cleaving Side-Activity of Ketopantoate Hydroxymethyltransferase (PanB). Front Microbiol (2016) 0.75
Folates in Plants: Research Advances and Progress in Crop Biofortification. Front Chem (2017) 0.75
Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science (2003) 39.19
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol (2004) 19.29
Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci Lett (2003) 18.34
Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell (1997) 11.61
Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J (1995) 10.68
An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root. Cell (1999) 9.05
SCARECROW is involved in positioning the stem cell niche in the Arabidopsis root meristem. Genes Dev (2003) 3.80
Gravity-regulated differential auxin transport from columella to lateral root cap cells. Proc Natl Acad Sci U S A (2003) 3.48
Short-range control of cell differentiation in the Arabidopsis root meristem. Nature (1997) 3.20
Transcriptional profile of the Arabidopsis root quiescent center. Plant Cell (2005) 2.55
Pyrimidine and purine biosynthesis and degradation in plants. Annu Rev Plant Biol (2006) 2.48
The HOBBIT gene is required for formation of the root meristem in the Arabidopsis embryo. Development (1998) 2.48
Compartmentation of folate-mediated one-carbon metabolism in eukaryotes. FASEB J (1991) 2.34
Auxin control of root development. Cold Spring Harb Perspect Biol (2010) 2.30
Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism. J Exp Bot (2004) 2.04
MET-IDEA: data extraction tool for mass spectrometry-based metabolomics. Anal Chem (2006) 1.94
ONE-CARBON METABOLISM IN HIGHER PLANTS. Annu Rev Plant Physiol Plant Mol Biol (2001) 1.80
In situ hybridization technique for mRNA detection in whole mount Arabidopsis samples. Nat Protoc (2006) 1.69
Methionine metabolism in plants: chloroplasts are autonomous for de novo methionine synthesis and can import S-adenosylmethionine from the cytosol. J Biol Chem (2004) 1.52
Improved imaging of actin filaments in transgenic Arabidopsis plants expressing a green fluorescent protein fusion to the C- and N-termini of the fimbrin actin-binding domain 2. New Phytol (2007) 1.49
Technical advance: an aniline blue staining procedure for confocal microscopy and 3D imaging of normal and perturbed cellular phenotypes in mature Arabidopsis embryos. Plant J (2000) 1.43
Short-Root regulates primary, lateral, and adventitious root development in Arabidopsis. Plant Physiol (2010) 1.38
Tetrahydrofolate biosynthesis in plants: molecular and functional characterization of dihydrofolate synthetase and three isoforms of folylpolyglutamate synthetase in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2001) 1.37
Folates and one-carbon metabolism in plants and fungi. Phytochemistry (1997) 1.36
Pyridoxine is required for post-embryonic root development and tolerance to osmotic and oxidative stresses. Plant J (2005) 1.33
Synthesis and turnover of folates in plants. Curr Opin Plant Biol (2002) 1.30
Higher plant plastids and cyanobacteria have folate carriers related to those of trypanosomatids. J Biol Chem (2005) 1.29
Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells. Plant Physiol (2008) 1.24
Nitrate and glutamate as environmental cues for behavioural responses in plant roots. Plant Cell Environ (2008) 1.21
Arabidopsis homologs of nucleus- and phragmoplast-localized kinase 2 and 3 and mitogen-activated protein kinase 4 are essential for microtubule organization. Plant Cell (2010) 1.20
Plant gamma-glutamyl hydrolases and folate polyglutamates: characterization, compartmentation, and co-occurrence in vacuoles. J Biol Chem (2005) 1.20
Hormone interactions at the root apical meristem. Plant Mol Biol (2008) 1.18
The metabolic role of leucovorin. Trends Biochem Sci (1993) 1.15
Folate metabolism in plants: an Arabidopsis homolog of the mammalian mitochondrial folate transporter mediates folate import into chloroplasts. J Biol Chem (2005) 1.13
Getting to the root of plant biology: impact of the Arabidopsis genome sequence on root research. Plant J (2010) 1.13
One-carbon metabolism in plants. Regulation of tetrahydrofolate synthesis during germination and seedling development. Plant Physiol (2003) 1.10
Regulation of folate and one-carbon metabolism in mammalian cells. III. Role of mitochondrial folylpoly-gamma-glutamate synthetase. J Biol Chem (1993) 1.05
Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis. Plant Cell (2006) 1.04
5-Formyltetrahydrofolate is an inhibitory but well tolerated metabolite in Arabidopsis leaves. J Biol Chem (2005) 1.02
Arabidopsis 10-formyl tetrahydrofolate deformylases are essential for photorespiration. Plant Cell (2008) 1.02
The analysis of folate and its metabolic precursors in biological samples. Anal Biochem (2005) 1.02
Polyglutamylation of folate coenzymes is necessary for methionine biosynthesis and maintenance of intact mitochondrial genome in Saccharomyces cerevisiae. J Biol Chem (2000) 0.97
Plant one-carbon metabolism and its engineering. Trends Plant Sci (2000) 0.95
Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development. Plant J (2010) 0.94
A class I ADP-ribosylation factor GTPase-activating protein is critical for maintaining directional root hair growth in Arabidopsis. Plant Physiol (2008) 0.92
Metabolic engineering in yeast demonstrates that S-adenosylmethionine controls flux through the methylenetetrahydrofolate reductase reaction in vivo. J Biol Chem (2001) 0.91
A genome-wide and metabolic analysis determined the adaptive response of Arabidopsis cells to folate depletion induced by methotrexate. Plant Physiol (2008) 0.90
One-carbon metabolism in plants: characterization of a plastid serine hydroxymethyltransferase. Biochem J (2010) 0.90
Regulation of one-carbon metabolism in Arabidopsis: the N-terminal regulatory domain of cystathionine gamma-synthase is cleaved in response to folate starvation. Plant Physiol (2007) 0.89
Functional genomics of root growth and development in Arabidopsis. Curr Opin Plant Biol (2008) 0.88
Plant Vacuolar ATP-binding Cassette Transporters That Translocate Folates and Antifolates in Vitro and Contribute to Antifolate Tolerance in Vivo. J Biol Chem (2009) 0.87
Mapping and expression of a bifunctional thymidylate synthase, dihydrofolate reductase gene from maize. Plant Mol Biol (1999) 0.86
The GLOBULAR ARREST1 gene, which is involved in the biosynthesis of folates, is essential for embryogenesis in Arabidopsis thaliana. Plant J (2003) 0.86
Tetrahydrofolate biosynthesis and distribution in higher plants. Biochem Soc Trans (2005) 0.83
The short-rooted vitamin B6-deficient mutant pdx1 has impaired local auxin biosynthesis. Planta (2009) 0.83
Folylpoly-gamma-glutamate synthetase: generation of isozymes and the role in one carbon metabolism and antifolate cytotoxicity. Adv Enzyme Regul (1999) 0.81
Roles of vitamins B5, B8, B9, B12 and molybdenum cofactor at cellular and organismal levels. Nat Prod Rep (2007) 0.80
Organization and function of the actin cytoskeleton in developing root cells. Int Rev Cytol (2006) 0.80
Cytogenetic analysis of Arabidopsis. Methods Mol Biol (1998) 0.76
Potential of metabolomics as a functional genomics tool. Trends Plant Sci (2004) 4.10
A gene expression atlas of the model legume Medicago truncatula. Plant J (2008) 3.38
A proposed framework for the description of plant metabolomics experiments and their results. Nat Biotechnol (2004) 3.32
Establishing reporting standards for metabolomic and metabonomic studies: a call for participation. OMICS (2006) 2.72
The metabolomics standards initiative. Nat Biotechnol (2007) 2.54
Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism. J Exp Bot (2004) 2.04
GC-MS SPME profiling of rhizobacterial volatiles reveals prospective inducers of growth promotion and induced systemic resistance in plants. Phytochemistry (2006) 2.03
MET-IDEA: data extraction tool for mass spectrometry-based metabolomics. Anal Chem (2006) 1.94
Auxin, actin and growth of the Arabidopsis thaliana primary root. Plant J (2007) 1.78
Virus infection improves drought tolerance. New Phytol (2008) 1.72
Genome-wide DNA methylation patterns in CD4+ T cells from patients with systemic lupus erythematosus. Epigenetics (2011) 1.71
Genomics-based selection and functional characterization of triterpene glycosyltransferases from the model legume Medicago truncatula. Plant J (2005) 1.70
MedicCyc: a biochemical pathway database for Medicago truncatula. Bioinformatics (2007) 1.66
Mass spectrometry strategies in metabolomics. J Biol Chem (2011) 1.60
Medicago truncatula and Glomus intraradices gene expression in cortical cells harboring arbuscules in the arbuscular mycorrhizal symbiosis. BMC Plant Biol (2009) 1.55
Improved imaging of actin filaments in transgenic Arabidopsis plants expressing a green fluorescent protein fusion to the C- and N-termini of the fimbrin actin-binding domain 2. New Phytol (2007) 1.49
Different mechanisms for phytoalexin induction by pathogen and wound signals in Medicago truncatula. Proc Natl Acad Sci U S A (2007) 1.46
Metabolomics spectral formatting, alignment and conversion tools (MSFACTs). Bioinformatics (2003) 1.45
Variants within MECP2, a key transcription regulator, are associated with increased susceptibility to lupus and differential gene expression in patients with systemic lupus erythematosus. Arthritis Rheum (2009) 1.43
Colocalization of L-phenylalanine ammonia-lyase and cinnamate 4-hydroxylase for metabolic channeling in phenylpropanoid biosynthesis. Plant Cell (2004) 1.40
The tobacco mosaic virus 126-kilodalton protein, a constituent of the virus replication complex, alone or within the complex aligns with and traffics along microfilaments. Plant Physiol (2005) 1.39
TCP1 modulates brassinosteroid biosynthesis by regulating the expression of the key biosynthetic gene DWARF4 in Arabidopsis thaliana. Plant Cell (2010) 1.38
Mapping the proteome of barrel medic (Medicago truncatula). Plant Physiol (2003) 1.35
Green fluorescent protein fusions to Arabidopsis fimbrin 1 for spatio-temporal imaging of F-actin dynamics in roots. Cell Motil Cytoskeleton (2004) 1.35
Metabolomics reveals novel pathways and differential mechanistic and elicitor-specific responses in phenylpropanoid and isoflavonoid biosynthesis in Medicago truncatula cell cultures. Plant Physiol (2007) 1.34
A transcript profiling approach reveals an epicatechin-specific glucosyltransferase expressed in the seed coat of Medicago truncatula. Proc Natl Acad Sci U S A (2008) 1.33
A distinct multicytokine profile is associated with anti-cyclical citrullinated peptide antibodies in patients with early untreated inflammatory arthritis. J Rheumatol (2004) 1.33
Functional characterization of the switchgrass (Panicum virgatum) R2R3-MYB transcription factor PvMYB4 for improvement of lignocellulosic feedstocks. New Phytol (2011) 1.31
Metabolic profiling of saponins in Medicago sativa and Medicago truncatula using HPLC coupled to an electrospray ion-trap mass spectrometer. Phytochemistry (2002) 1.30
Legume natural products: understanding and manipulating complex pathways for human and animal health. Plant Physiol (2003) 1.30
LAP5 and LAP6 encode anther-specific proteins with similarity to chalcone synthase essential for pollen exine development in Arabidopsis. Plant Physiol (2010) 1.29
A genomics approach to deciphering lignin biosynthesis in switchgrass. Plant Cell (2013) 1.26
Methyl jasmonate and yeast elicitor induce differential transcriptional and metabolic re-programming in cell suspension cultures of the model legume Medicago truncatula. Planta (2004) 1.25
Functional analysis of the cellulose synthase-like genes CSLD1, CSLD2, and CSLD4 in tip-growing Arabidopsis cells. Plant Physiol (2008) 1.24
Complex regulation of Arabidopsis AGR1/PIN2-mediated root gravitropic response and basipetal auxin transport by cantharidin-sensitive protein phosphatases. Plant J (2005) 1.24
Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturation. Plant J (2013) 1.23
Hypervariable genes--experimental error or hidden dynamics. Nucleic Acids Res (2004) 1.22
Metabolic profiling and systematic identification of flavonoids and isoflavonoids in roots and cell suspension cultures of Medicago truncatula using HPLC-UV-ESI-MS and GC-MS. Phytochemistry (2006) 1.22
Overexpression of miR156 in switchgrass (Panicum virgatum L.) results in various morphological alterations and leads to improved biomass production. Plant Biotechnol J (2012) 1.21
Proteomics of Medicago sativa cell walls. Phytochemistry (2004) 1.20
Arabidopsis VIRE2 INTERACTING PROTEIN2 is required for Agrobacterium T-DNA integration in plants. Plant Cell (2007) 1.20
MATE2 mediates vacuolar sequestration of flavonoid glycosides and glycoside malonates in Medicago truncatula. Plant Cell (2011) 1.19
Small RNAs in tomato fruit and leaf development. Biochim Biophys Acta (2007) 1.18
Evidence for chronic, peripheral activation of neutrophils in polyarticular juvenile rheumatoid arthritis. Arthritis Res Ther (2006) 1.18
STENOFOLIA regulates blade outgrowth and leaf vascular patterning in Medicago truncatula and Nicotiana sylvestris. Plant Cell (2011) 1.17
Selective lignin downregulation leads to constitutive defense response expression in alfalfa (Medicago sativa L.). New Phytol (2011) 1.17
Differential effects of two phospholipase D inhibitors, 1-butanol and N-acylethanolamine, on in vivo cytoskeletal organization and Arabidopsis seedling growth. Protoplasma (2005) 1.17
Heterologous expression of two Medicago truncatula putative ERF transcription factor genes, WXP1 and WXP2, in Arabidopsis led to increased leaf wax accumulation and improved drought tolerance, but differential response in freezing tolerance. Plant Mol Biol (2007) 1.17
Metabolomics as a Hypothesis-Generating Functional Genomics Tool for the Annotation of Arabidopsis thaliana Genes of "Unknown Function". Front Plant Sci (2012) 1.17
The Medicago truncatula gene expression atlas web server. BMC Bioinformatics (2009) 1.16
Biomarker metabolites capturing the metabolite variance present in a rice plant developmental period. BMC Plant Biol (2005) 1.16
Genomic and coexpression analyses predict multiple genes involved in triterpene saponin biosynthesis in Medicago truncatula. Plant Cell (2010) 1.15
PlantMetabolomics.org: a web portal for plant metabolomics experiments. Plant Physiol (2010) 1.15
SCAR mediates light-induced root elongation in Arabidopsis through photoreceptors and proteasomes. Plant Cell (2011) 1.15
Plant neighbor identity influences plant biochemistry and physiology related to defense. BMC Plant Biol (2010) 1.14
Altered profile of secondary metabolites in the root exudates of Arabidopsis ATP-binding cassette transporter mutants. Plant Physiol (2007) 1.13
Salicylic acid and systemic acquired resistance play a role in attenuating crown gall disease caused by Agrobacterium tumefaciens. Plant Physiol (2007) 1.13
Mating factor linkage and genome evolution in basidiomycetous pathogens of cereals. Fungal Genet Biol (2006) 1.13
Ethanolamide oxylipins of linolenic acid can negatively regulate Arabidopsis seedling development. Plant Cell (2013) 1.12
Root-microbe communication through protein secretion. J Biol Chem (2008) 1.11
Functional characterization of proanthocyanidin pathway enzymes from tea and their application for metabolic engineering. Plant Physiol (2013) 1.11
Manipulation of Arabidopsis fatty acid amide hydrolase expression modifies plant growth and sensitivity to N-acylethanolamines. Proc Natl Acad Sci U S A (2006) 1.10
Regiospecific hydroxylation of isoflavones by cytochrome p450 81E enzymes from Medicago truncatula. Plant J (2003) 1.10
System responses to long-term drought and re-watering of two contrasting alfalfa varieties. Plant J (2011) 1.09
Enhanced gravitropism of roots with a disrupted cap actin cytoskeleton. Plant Physiol (2003) 1.09
A WD40 repeat protein from Medicago truncatula is necessary for tissue-specific anthocyanin and proanthocyanidin biosynthesis but not for trichome development. Plant Physiol (2009) 1.09
N-Acylethanolamine metabolism interacts with abscisic acid signaling in Arabidopsis thaliana seedlings. Plant Cell (2007) 1.05
A large-scale genetic screen in Arabidopsis to identify genes involved in pollen exine production. Plant Physiol (2011) 1.05
Switchgrass (Panicum virgatum) possesses a divergent family of cinnamoyl CoA reductases with distinct biochemical properties. New Phytol (2009) 1.04
Loss of abaxial leaf epicuticular wax in Medicago truncatula irg1/palm1 mutants results in reduced spore differentiation of anthracnose and nonhost rust pathogens. Plant Cell (2012) 1.04
Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum. Plant Physiol (2010) 1.03
Global gene expression profiling during Medicago truncatula-Phymatotrichopsis omnivora interaction reveals a role for jasmonic acid, ethylene, and the flavonoid pathway in disease development. Mol Plant Microbe Interact (2009) 1.03
Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.). Plant J (2013) 1.02
The N-acylethanolamine-mediated regulatory pathway in plants. Chem Biodivers (2007) 1.00
Overexpression of a fatty acid amide hydrolase compromises innate immunity in Arabidopsis. Plant J (2008) 1.00
Global reprogramming of transcription and metabolism in Medicago truncatula during progressive drought and after rewatering. Plant Cell Environ (2014) 0.99
Genomic inventory and transcriptional analysis of Medicago truncatula transporters. Plant Physiol (2009) 0.99
Nonflowering plants possess a unique folate-dependent phenylalanine hydroxylase that is localized in chloroplasts. Plant Cell (2010) 0.99
TrichOME: a comparative omics database for plant trichomes. Plant Physiol (2009) 0.98
From model to crop: functional analysis of a STAY-GREEN gene in the model legume Medicago truncatula and effective use of the gene for alfalfa improvement. Plant Physiol (2011) 0.98
LAP3, a novel plant protein required for pollen development, is essential for proper exine formation. Sex Plant Reprod (2009) 0.97
Statistical monitoring of weak spots for improvement of normalization and ratio estimates in microarrays. BMC Bioinformatics (2004) 0.96