Published in Genet Sel Evol on January 17, 2011
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Simulating the collaborative cross: power of quantitative trait loci detection and mapping resolution in large sets of recombinant inbred strains of mice. Genetics (2005) 2.50
A simple and rapid method for calculating identity-by-descent matrices using multiple markers. Genet Sel Evol (2001) 2.14
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QTL analysis of body composition and metabolic traits in an intercross between chicken lines divergently selected for growth. Physiol Genomics (2006) 1.23
A high-resolution linkage map for the Z chromosome in chicken reveals hot spots for recombination. Cytogenet Genome Res (2007) 1.15
Genetic architecture of tameness in a rat model of animal domestication. Genetics (2009) 1.15
Separation of base allele and sampling term effects gives new insights in variance component QTL analysis. BMC Genet (2007) 1.12
Quantitative trait locus analysis in crosses between outbred lines with dominance and inbreeding. Genetics (2001) 0.93
High resolution mapping of chromosomal regions controlling resistance to gastrointestinal nematode infections in an advanced intercross line of mice. Mamm Genome (2006) 0.87
Using an advanced intercross line to identify quantitative trait loci controlling immune response during collagen-induced arthritis. Genes Immun (2007) 0.86
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Efficient mapping of mendelian traits in dogs through genome-wide association. Nat Genet (2007) 5.99
Whole-genome resequencing reveals loci under selection during chicken domestication. Nature (2010) 5.48
A regulatory mutation in IGF2 causes a major QTL effect on muscle growth in the pig. Nature (2003) 5.41
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms. Nature (2004) 5.24
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse. Nature (2013) 3.45
Identification of the yellow skin gene reveals a hybrid origin of the domestic chicken. PLoS Genet (2008) 3.04
Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection. BMC Proc (2009) 2.96
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A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate. Genome Res (2008) 2.70
Strong signatures of selection in the domestic pig genome. Proc Natl Acad Sci U S A (2012) 2.59
A unified model for functional and statistical epistasis and its application in quantitative trait Loci analysis. Genetics (2007) 2.47
Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs. Nat Genet (2007) 2.33
A global search reveals epistatic interaction between QTL for early growth in the chicken. Genome Res (2003) 2.13
A cis-acting regulatory mutation causes premature hair graying and susceptibility to melanoma in the horse. Nat Genet (2008) 2.13
Copy number variation in intron 1 of SOX5 causes the Pea-comb phenotype in chickens. PLoS Genet (2009) 2.10
Contrasting mode of evolution at a coat color locus in wild and domestic pigs. PLoS Genet (2009) 2.09
Many QTLs with minor additive effects are associated with a large difference in growth between two selection lines in chickens. Genet Res (2005) 2.07
The 5'-AMP-activated protein kinase gamma3 isoform has a key role in carbohydrate and lipid metabolism in glycolytic skeletal muscle. J Biol Chem (2004) 1.94
AMPK-mediated AS160 phosphorylation in skeletal muscle is dependent on AMPK catalytic and regulatory subunits. Diabetes (2006) 1.85
Genome-wide effects of long-term divergent selection. PLoS Genet (2010) 1.82
Rethinking dog domestication by integrating genetics, archeology, and biogeography. Proc Natl Acad Sci U S A (2012) 1.78
Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice. Nature (2012) 1.72
Statistical epistasis is a generic feature of gene regulatory networks. Genetics (2006) 1.72
Establishing the validity of domestication genes using DNA from ancient chickens. Proc Natl Acad Sci U S A (2014) 1.69
Evolutionary potential of hidden genetic variation. Trends Ecol Evol (2008) 1.65
Patterns of East Asian pig domestication, migration, and turnover revealed by modern and ancient DNA. Proc Natl Acad Sci U S A (2010) 1.63
ZBED6, a novel transcription factor derived from a domesticated DNA transposon regulates IGF2 expression and muscle growth. PLoS Biol (2009) 1.61
Inheritance beyond plain heritability: variance-controlling genes in Arabidopsis thaliana. PLoS Genet (2012) 1.58
A missense mutation in PMEL17 is associated with the Silver coat color in the horse. BMC Genet (2006) 1.58
Genome-wide signatures of differential DNA methylation in pediatric acute lymphoblastic leukemia. Genome Biol (2013) 1.57
The Dominant white, Dun and Smoky color variants in chicken are associated with insertion/deletion polymorphisms in the PMEL17 gene. Genetics (2004) 1.57
Mitochondrial diversity in European and Chinese pigs is consistent with population expansions that occurred prior to domestication. Proc Biol Sci (2006) 1.56
Common variants at the MHC locus and at chromosome 16q24.1 predispose to Barrett's esophagus. Nat Genet (2012) 1.52
A large duplication associated with dominant white color in pigs originated by homologous recombination between LINE elements flanking KIT. Mamm Genome (2002) 1.49
Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring. Proc Natl Acad Sci U S A (2012) 1.49
The mutational landscape in pediatric acute lymphoblastic leukemia deciphered by whole genome sequencing. Hum Mutat (2015) 1.46
A novel unstable duplication upstream of HAS2 predisposes to a breed-defining skin phenotype and a periodic fever syndrome in Chinese Shar-Pei dogs. PLoS Genet (2011) 1.45
Current perspectives and the future of domestication studies. Proc Natl Acad Sci U S A (2014) 1.45
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project. Genome Biol (2015) 1.40
Complex inheritance of melanoma and pigmentation of coat and skin in Grey horses. PLoS Genet (2013) 1.39
A novel generalized ridge regression method for quantitative genetics. Genetics (2013) 1.36
Expression profiling of the gamma-subunit isoforms of AMP-activated protein kinase suggests a major role for gamma3 in white skeletal muscle. Am J Physiol Endocrinol Metab (2003) 1.32
Use of randomization testing to detect multiple epistatic QTLs. Genet Res (2002) 1.29
Changes in exercise-induced gene expression in 5'-AMP-activated protein kinase gamma3-null and gamma3 R225Q transgenic mice. Diabetes (2005) 1.29
Major growth QTLs in fowl are related to fearful behavior: possible genetic links between fear responses and production traits in a red junglefowl x white leghorn intercross. Behav Genet (2004) 1.28
Genetic analysis of an F(2) intercross between two chicken lines divergently selected for body-weight. BMC Genomics (2009) 1.27
Comparison of analyses of the QTLMAS XII common dataset. II: genome-wide association and fine mapping. BMC Proc (2009) 1.27
The uncoupling protein 1 gene (UCP1) is disrupted in the pig lineage: a genetic explanation for poor thermoregulation in piglets. PLoS Genet (2006) 1.26
How to perform meaningful estimates of genetic effects. PLoS Genet (2008) 1.26
An improved method for quantitative trait loci detection and identification of within-line segregation in F2 intercross designs. Genetics (2008) 1.23
A complex genomic rearrangement involving the endothelin 3 locus causes dermal hyperpigmentation in the chicken. PLoS Genet (2011) 1.23
QTL analysis of body composition and metabolic traits in an intercross between chicken lines divergently selected for growth. Physiol Genomics (2006) 1.23
Replication and explorations of high-order epistasis using a large advanced intercross line pedigree. PLoS Genet (2011) 1.20
Heritable genome-wide variation of gene expression and promoter methylation between wild and domesticated chickens. BMC Genomics (2012) 1.16
LUPA: a European initiative taking advantage of the canine genome architecture for unravelling complex disorders in both human and dogs. Vet J (2011) 1.15
Novel insights into the bovine polled phenotype and horn ontogenesis in Bovidae. PLoS One (2013) 1.15
Genetic architecture of tameness in a rat model of animal domestication. Genetics (2009) 1.15
Haplotype sharing refines the location of an imprinted quantitative trait locus with major effect on muscle mass to a 250-kb chromosome segment containing the porcine IGF2 gene. Genetics (2003) 1.13
QTL analysis of a red junglefowl x White Leghorn intercross reveals trade-off in resource allocation between behavior and production traits. Behav Genet (2002) 1.13
The Rose-comb mutation in chickens constitutes a structural rearrangement causing both altered comb morphology and defective sperm motility. PLoS Genet (2012) 1.12
Separation of base allele and sampling term effects gives new insights in variance component QTL analysis. BMC Genet (2007) 1.12
The genetic architecture of a female sexual ornament. Evolution (2007) 1.12
5'-AMP-activated protein kinase regulates skeletal muscle glycogen content and ergogenics. FASEB J (2005) 1.09
Dissection of the genetic architecture of body weight in chicken reveals the impact of epistasis on domestication traits. Genetics (2008) 1.07
The Dark brown plumage color in chickens is caused by an 8.3-kb deletion upstream of SOX10. Pigment Cell Melanoma Res (2011) 1.04
Quantitative trait loci for BMD and bone strength in an intercross between domestic and wildtype chickens. J Bone Miner Res (2007) 1.04
Opposite transcriptional regulation in skeletal muscle of AMP-activated protein kinase gamma3 R225Q transgenic versus knock-out mice. J Biol Chem (2006) 0.99
Estimating the frequency of Asian cytochrome B haplotypes in standard European and local Spanish pig breeds. Genet Sel Evol (2004) 0.99
Chicken genomics: feather-pecking and victim pigmentation. Nature (2004) 0.99
Mutations in SLC45A2 cause plumage color variation in chicken and Japanese quail. Genetics (2006) 0.99
The mutation causing the black-and-tan pigmentation phenotype of Mangalitza pigs maps to the porcine ASIP locus but does not affect its coding sequence. Mamm Genome (2006) 0.98
Avian models with spontaneous autoimmune diseases. Adv Immunol (2006) 0.98
Comparative sequence analysis of the INS-IGF2-H19 gene cluster in pigs. Mamm Genome (2002) 0.98
ZBED evolution: repeated utilization of DNA transposons as regulators of diverse host functions. PLoS One (2013) 0.98
A sexual ornament in chickens is affected by pleiotropic alleles at HAO1 and BMP2, selected during domestication. PLoS Genet (2012) 0.97
Increasing the efficiency of variance component quantitative trait loci analysis by using reduced-rank identity-by-descent matrices. Genetics (2007) 0.97
Inactivation of Pmel alters melanosome shape but has only a subtle effect on visible pigmentation. PLoS Genet (2011) 0.97
Estimation of genetic variance for macro- and micro-environmental sensitivity using double hierarchical generalized linear models. Genet Sel Evol (2013) 0.97
The IGF2-intron3-G3072A substitution explains a major imprinted QTL effect on backfat thickness in a Meishan x European white pig intercross. Genet Res (2004) 0.95
Phenotypic evolution from genetic polymorphisms in a radial network architecture. BMC Biol (2007) 0.95
Genetic dissection of growth traits in a Chinese indigenous × commercial broiler chicken cross. BMC Genomics (2013) 0.95
Hierarchical likelihood opens a new way of estimating genetic values using genome-wide dense marker maps. BMC Proc (2011) 0.95