Published in J Bacteriol on March 25, 2011
Complete genome sequence and comparative analysis of Acetobacter pasteurianus 386B, a strain well-adapted to the cocoa bean fermentation ecosystem. BMC Genomics (2013) 1.02
Acetic acid bacteria genomes reveal functional traits for adaptation to life in insect guts. Genome Biol Evol (2014) 0.96
Bacterial cellulose biosynthesis: diversity of operons, subunits, products, and functions. Trends Microbiol (2015) 0.95
Draft Genome Sequence of Komagataeibacter rhaeticus Strain AF1, a High Producer of Cellulose, Isolated from Kombucha Tea. Genome Announc (2014) 0.81
An efficient method using Gluconacetobacter europaeus to reduce an unfavorable flavor compound, acetoin, in rice vinegar production. Appl Environ Microbiol (2013) 0.81
Effective trapping of fruit flies with cultures of metabolically modified acetic acid bacteria. Appl Environ Microbiol (2015) 0.75
Draft Genome Sequence of Komagataeibacter intermedius Strain AF2, a Producer of Cellulose, Isolated from Kombucha Tea. Genome Announc (2015) 0.75
Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res (2008) 151.16
ABySS: a parallel assembler for short read sequence data. Genome Res (2009) 43.20
Enzyme-specific profiles for genome annotation: PRIAM. Nucleic Acids Res (2003) 5.10
Improvements to services at the European Nucleotide Archive. Nucleic Acids Res (2009) 5.00
Complete genome sequence of the acetic acid bacterium Gluconobacter oxydans. Nat Biotechnol (2005) 2.94
The Mycoplasma conjunctivae genome sequencing, annotation and analysis. BMC Bioinformatics (2009) 1.44
Whole-genome analyses reveal genetic instability of Acetobacter pasteurianus. Nucleic Acids Res (2009) 1.41
Biotechnological applications of acetic acid bacteria. Crit Rev Biotechnol (2008) 1.30
Genome sequence of a cellulose-producing bacterium, Gluconacetobacter hansenii ATCC 23769. J Bacteriol (2010) 1.22
Characterization and spontaneous mutation of a novel gene, polE, involved in pellicle formation in Acetobacter tropicalis SKU1100. Microbiology (2005) 1.00
Strain typing of acetic acid bacteria responsible for vinegar production by the submerged elaboration method. Food Microbiol (2010) 0.86
The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res (2003) 24.72
A whole-genome association study of major determinants for host control of HIV-1. Science (2007) 15.19
PROSITE: a documented database using patterns and profiles as motif descriptors. Brief Bioinform (2002) 8.77
Genetic variation in IL28B is associated with chronic hepatitis C and treatment failure: a genome-wide association study. Gastroenterology (2010) 7.86
Common genetic variation and the control of HIV-1 in humans. PLoS Genet (2009) 3.68
The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification. Cell Metab (2006) 3.00
MyHits: improvements to an interactive resource for analyzing protein sequences. Nucleic Acids Res (2007) 2.77
The genome of the fire ant Solenopsis invicta. Proc Natl Acad Sci U S A (2011) 2.74
Inhibiting the mitochondrial fission machinery does not prevent Bax/Bak-dependent apoptosis. Mol Cell Biol (2006) 2.71
InterPro: an integrated documentation resource for protein families, domains and functional sites. Brief Bioinform (2002) 2.66
Preventing mitochondrial fission impairs mitochondrial function and leads to loss of mitochondrial DNA. PLoS One (2008) 2.47
RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization. BMC Genomics (2011) 2.14
Decoding NMDA receptor signaling: identification of genomic programs specifying neuronal survival and death. Neuron (2007) 2.08
Genome-wide mRNA expression correlates of viral control in CD4+ T-cells from HIV-1-infected individuals. PLoS Pathog (2010) 1.90
Genomewide association study using a high-density single nucleotide polymorphism array and case-control design identifies a novel essential hypertension susceptibility locus in the promoter region of endothelial NO synthase. Hypertension (2011) 1.89
Natural gene-expression variation in Down syndrome modulates the outcome of gene-dosage imbalance. Am J Hum Genet (2007) 1.86
Gene expression during sex determination reveals a robust female genetic program at the onset of ovarian development. Dev Biol (2005) 1.85
Experience using web services for biological sequence analysis. Brief Bioinform (2008) 1.78
Comparative transcriptomics of rice reveals an ancient pattern of response to microbial colonization. Proc Natl Acad Sci U S A (2005) 1.74
Nuclear calcium signaling controls expression of a large gene pool: identification of a gene program for acquired neuroprotection induced by synaptic activity. PLoS Genet (2009) 1.72
PeroxiBase: a database with new tools for peroxidase family classification. Nucleic Acids Res (2008) 1.68
Genome-wide, high-resolution DNA methylation profiling using bisulfite-mediated cytosine conversion. Genome Res (2008) 1.68
MyHits: a new interactive resource for protein annotation and domain identification. Nucleic Acids Res (2004) 1.64
Comparative transcriptomics of extreme phenotypes of human HIV-1 infection and SIV infection in sooty mangabey and rhesus macaque. J Clin Invest (2011) 1.61
ADME pharmacogenetics: investigation of the pharmacokinetics of the antiretroviral agent lopinavir coformulated with ritonavir. Pharmacogenet Genomics (2010) 1.46
The Mycoplasma conjunctivae genome sequencing, annotation and analysis. BMC Bioinformatics (2009) 1.44
Sertoli cell Dicer is essential for spermatogenesis in mice. Dev Biol (2008) 1.37
Re-examination of siRNA specificity questions role of PICH and Tao1 in the spindle checkpoint and identifies Mad2 as a sensitive target for small RNAs. Chromosoma (2009) 1.33
Expression profiling of mammalian male meiosis and gametogenesis identifies novel candidate genes for roles in the regulation of fertility. Mol Biol Cell (2004) 1.33
PeroxiBase: the peroxidase database. Phytochemistry (2007) 1.18
Silencing of c-Fos expression by microRNA-155 is critical for dendritic cell maturation and function. Blood (2011) 1.16
Oligonucleotide microarray analysis reveals PDX1 as an essential regulator of mitochondrial metabolism in rat islets. J Biol Chem (2004) 1.14
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation. BMC Bioinformatics (2006) 1.11
Growth differentiation factor 15 production is necessary for normal erythroid differentiation and is increased in refractory anaemia with ring-sideroblasts. Br J Haematol (2008) 1.09
Transcript profiling suggests that differential metabolic adaptation of mice to a high fat diet is associated with changes in liver to muscle lipid fluxes. J Biol Chem (2004) 1.08
The Saccharomyces cerevisiae YLL012/YEH1, YLR020/YEH2, and TGL1 genes encode a novel family of membrane-anchored lipases that are required for steryl ester hydrolysis. Mol Cell Biol (2005) 1.06
Estrogen receptor alpha is a major contributor to estrogen-mediated fetal testis dysgenesis and cryptorchidism. Endocrinology (2007) 1.05
Adipose tissue integrity as a prerequisite for systemic energy balance: a critical role for peroxisome proliferator-activated receptor gamma. J Biol Chem (2007) 1.03
Loss of Dicer in Sertoli cells has a major impact on the testicular proteome of mice. Mol Cell Proteomics (2010) 1.01
No widespread induction of cell death genes occurs in pure motoneurons in an amyotrophic lateral sclerosis mouse model. Hum Mol Genet (2005) 1.01
Orientation and expression of methicillin-resistant Staphylococcus aureus small RNAs by direct multiplexed measurements using the nCounter of NanoString technology. J Microbiol Methods (2010) 1.00
Fourmidable: a database for ant genomics. BMC Genomics (2009) 0.99
PeroxiBase: a class III plant peroxidase database. Phytochemistry (2006) 0.99
Novel murine dendritic cell lines: a powerful auxiliary tool for dendritic cell research. Front Immunol (2012) 0.97
Gene expression profiling provides insights into pathways of oxaliplatin-related sinusoidal obstruction syndrome in humans. Mol Cancer Ther (2011) 0.95
Microsatellites for disentangling underground networks: strain-specific identification of Glomus intraradices, an arbuscular mycorrhizal fungus. Fungal Genet Biol (2008) 0.93
Mutants of Anabaena sp. PCC 7120 lacking alr1690 and alpha-furA antisense RNA show a pleiotropic phenotype and altered photosynthetic machinery. J Plant Physiol (2009) 0.93
Engineering of dominant active basic helix-loop-helix proteins that are resistant to negative regulation by postnatal central nervous system antineurogenic cues. Stem Cells (2009) 0.91
Mutations in the SPARC-related modular calcium-binding protein 1 gene, SMOC1, cause waardenburg anophthalmia syndrome. Am J Hum Genet (2010) 0.90
Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef). BMC Genomics (2014) 0.89
Short term evolution of a highly transmissible methicillin-resistant Staphylococcus aureus clone (ST228) in a tertiary care hospital. PLoS One (2012) 0.88
Visualization and quality assessment of de novo genome assemblies. Bioinformatics (2011) 0.87
Overexpression of FurA in Anabaena sp. PCC 7120 reveals new targets for this regulator involved in photosynthesis, iron uptake and cellular morphology. Plant Cell Physiol (2010) 0.86
Global expression profiling of Chlamydomonas reinhardtii exposed to trace levels of free cadmium. Environ Toxicol Chem (2008) 0.86
The cutaneous lesions of dioxin exposure: lessons from the poisoning of Victor Yushchenko. Toxicol Sci (2011) 0.86
A mouse embryonic stem cell bank for inducible overexpression of human chromosome 21 genes. Genome Biol (2010) 0.86
Potential detrimental effects of a phytoestrogen-rich diet on male fertility in mice. Mol Cell Endocrinol (2010) 0.85
Draft Genome Sequence of the Virulent Avibacterium paragallinarum Serotype A Strain JF4211 and Identification of Two Toxins. Genome Announc (2013) 0.83
Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds. Environ Microbiol (2014) 0.83
Using digital RNA counting and flow cytometry to compare mRNA with protein expression in acute leukemias. PLoS One (2012) 0.83
Proteome analysis of Acetobacter pasteurianus during acetic acid fermentation. J Proteomics (2011) 0.82
On ubiquitin ligases and cancer. Hum Mutat (2005) 0.82
Blockade of T cell contact-activation of human monocytes by high-density lipoproteins reveals a new pattern of cytokine and inflammatory genes. PLoS One (2010) 0.82
Rapid identification of acetic acid bacteria using MALDI-TOF mass spectrometry fingerprinting. Syst Appl Microbiol (2012) 0.81
A novel bioinformatics pipeline to discover genes related to arbuscular mycorrhizal symbiosis based on their evolutionary conservation pattern among higher plants. BMC Plant Biol (2014) 0.80
Genome-wide comparison of FGFRL1 with structurally related surface receptors. Exp Ther Med (2010) 0.79
Transcriptional and post-transcriptional profile of human chromosome 21. Genome Res (2009) 0.78
Specificity of commercial anti-spectrin antibody in the study of fungal and Oomycete spectrin: cross-reaction with proteins other than spectrin. Fungal Genet Biol (2008) 0.78
Metabolism and biological activities of topical 4-oxoretinoids in mouse skin. J Invest Dermatol (2007) 0.77
Extensive natural variation for cellular hydrogen peroxide release is genetically controlled. PLoS One (2012) 0.77
Draft Genome Sequence of the Virulent Clostridium chauvoei Reference Strain JF4335. Genome Announc (2013) 0.77
Draft Genome Sequences of Multidrug-Resistant Acinetobacter sp. Strains from Colombian Hospitals. Genome Announc (2013) 0.75
Unexpected vagaries of microsatellite loci in Glomus intraradices: length polymorphisms are rarely caused by variation in repeat number only. New Phytol (2008) 0.75
Hunting for insect-specific protein domains. In Silico Biol (2006) 0.75
Characterization of Neurospora crassa α-actinin. Curr Microbiol (2011) 0.75
Automatic analysis of microRNA microarray images using mathematical morphology. Conf Proc IEEE Eng Med Biol Soc (2007) 0.75