Published in Appl Environ Microbiol on April 01, 2011
Discovering new indicators of fecal pollution. Trends Microbiol (2014) 0.96
Waterborne pathogens: detection methods and challenges. Pathogens (2015) 0.85
New molecular quantitative PCR assay for detection of host-specific Bifidobacteriaceae suitable for microbial source tracking. Appl Environ Microbiol (2012) 0.83
Complete genome sequence of Bifidobacterium longum subsp. longum KACC 91563. J Bacteriol (2011) 0.78
The Development of a Novel qPCR Assay-Set for Identifying Fecal Contamination Originating from Domestic Fowls and Waterfowl in Israel. Front Microbiol (2016) 0.77
Evaluation of five microbial and four mitochondrial DNA markers for tracking human and pig fecal pollution in freshwater. Sci Rep (2016) 0.75
Development of new host-specific Bacteroides qPCRs for the identification of fecal contamination sources in water. Microbiologyopen (2016) 0.75
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol (1993) 51.00
Diversity of the human intestinal microbial flora. Science (2005) 49.64
16S ribosomal DNA amplification for phylogenetic study. J Bacteriol (1991) 47.78
Comparative analysis of human gut microbiota by barcoded pyrosequencing. PLoS One (2008) 14.63
Detection and localization of single base changes by denaturing gradient gel electrophoresis. Methods Enzymol (1987) 10.90
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie Van Leeuwenhoek (1998) 8.42
Quantitative fluorescence in situ hybridization of Bifidobacterium spp. with genus-specific 16S rRNA-targeted probes and its application in fecal samples. Appl Environ Microbiol (1995) 7.57
Mucosa-associated bacteria in the human gastrointestinal tract are uniformly distributed along the colon and differ from the community recovered from feces. Appl Environ Microbiol (2002) 6.74
A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA. Appl Environ Microbiol (2000) 3.95
Identification of nonpoint sources of fecal pollution in coastal waters by using host-specific 16S ribosomal DNA genetic markers from fecal anaerobes. Appl Environ Microbiol (2000) 3.52
Bifidobacterial diversity in human feces detected by genus-specific PCR and denaturing gradient gel electrophoresis. Appl Environ Microbiol (2001) 3.49
Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers. Appl Environ Microbiol (1999) 3.06
Diversity of the human gastrointestinal tract microbiota revisited. Environ Microbiol (2007) 3.00
Identification and quantification of Bifidobacterium species isolated from food with genus-specific 16S rRNA-targeted probes by colony hybridization and PCR. Appl Environ Microbiol (1997) 2.68
Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water. Appl Environ Microbiol (2006) 2.58
Molecular ecological analysis of the gastrointestinal microbiota: a review. J Nutr (2004) 2.41
16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach. Water Res (2007) 2.15
Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification. Appl Environ Microbiol (2005) 2.06
Survival and detection of Bacteroides spp., prospective indicator bacteria. Appl Environ Microbiol (1985) 1.96
Denaturing gradient gel electrophoresis analysis of 16S ribosomal DNA amplicons to monitor changes in fecal bacterial populations of weaning pigs after introduction of Lactobacillus reuteri strain MM53. Appl Environ Microbiol (2000) 1.93
Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota. J Microbiol Methods (1999) 1.84
Identification, detection, and enumeration of human bifidobacterium species by PCR targeting the transaldolase gene. Appl Environ Microbiol (2002) 1.62
Quantitation of HIV-1 proviral DNA relative to cellular DNA by the polymerase chain reaction. Anal Biochem (1990) 1.57
Assessment of bifidobacteria as indicators of human fecal pollution. Appl Environ Microbiol (1981) 1.46
Insights into the taxonomy, genetics and physiology of bifidobacteria. Antonie Van Leeuwenhoek (2004) 1.43
Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater. Appl Microbiol Biotechnol (2006) 1.42
Sorbitol-fermenting bifidobacteria as specific indicators of human faecal pollution. J Appl Bacteriol (1983) 1.37
Spatial and temporal variation of the intestinal bacterial community in commercially raised broiler chickens during growth. Microb Ecol (2002) 1.29
Persistence of PCR-detectable Bacteroides distasonis from human feces in river water. Appl Environ Microbiol (1998) 1.26
Case study of the distribution of mucosa-associated Bifidobacterium species, Lactobacillus species, and other lactic acid bacteria in the human colon. Appl Environ Microbiol (2003) 1.19
A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area. Lett Appl Microbiol (2007) 1.17
Integrated analysis of established and novel microbial and chemical methods for microbial source tracking. Appl Environ Microbiol (2006) 1.13
Use of Bifidobacterium dentium as an indicator of the origin of fecal water pollution. Appl Environ Microbiol (2003) 1.05
Bacterial composition of commercial probiotic products as evaluated by PCR-DGGE analysis. Int J Food Microbiol (2003) 1.05
Prevalence of the stx2 gene in coliform populations from aquatic environments. Appl Environ Microbiol (2004) 1.04
Multiplex PCR with 16S rRNA gene-targeted primers of bifidobacterium spp. to identify sources of fecal pollution. Appl Environ Microbiol (2004) 1.04
Bifidobacterium species isolated from animal feces and from beef and pork meat. J Food Prot (2006) 1.00
Effects of zinc bacitracin, bird age and access to range on bacterial microbiota in the ileum and caeca of broiler chickens. J Appl Microbiol (2008) 1.00
Bifidobacteria in feces and environmental waters. Appl Environ Microbiol (2007) 0.99
Development of microbial and chemical MST tools to identify the origin of the faecal pollution in bathing and shellfish harvesting waters in France. Water Res (2010) 0.99
The detection of Bifidobacterium adolescentis by colony hybridization as an indicator of human faecal pollution. J Appl Microbiol (2002) 0.98
Tracking the origin of faecal pollution in surface water: an ongoing project within the European Union research programme. J Water Health (2004) 0.96
Detection of bifidobacteria by using propionic acid as a selective agent. Appl Environ Microbiol (1991) 0.95
Increased amount of Bifidobacterium thermacidophilum and Megasphaera elsdenii in the colonic microbiota of pigs fed a swine dysentery preventive diet containing chicory roots and sweet lupine. J Appl Microbiol (2007) 0.94
Characterization of human intestinal bifidobacteria using competitive PCR and PCR-TTGE. FEMS Microbiol Ecol (2006) 0.93
Evaluation of the rrn operon copy number in Bifidobacterium using real-time PCR. Lett Appl Microbiol (2004) 0.93
Rapid detection of human fecal contamination in estuarine environments by PCR targeting of Bifidobacterium adolescentis. J Microbiol Methods (2006) 0.93
Human-specific fecal bacteria in wastewater treatment plant effluents. Water Res (2009) 0.90
Composition of microbiota in content and mucus from cecae of broiler chickens as measured by fluorescent in situ hybridization with group-specific, 16S rRNA-targeted oligonucleotide probes. Poult Sci (2003) 0.87
The persistence of bifidobacteria populations in a river measured by molecular and culture techniques. J Appl Microbiol (2009) 0.87
Molecular indicators used in the development of predictive models for microbial source tracking. Appl Environ Microbiol (2010) 0.87
Use of a Bacteroides thetaiotaomicron-specific alpha-1-6, mannanase quantitative PCR to detect human faecal pollution in water. J Appl Microbiol (2008) 0.86
The effect of reducing agents on the recovery of injured Bifidobacterium cells. J Microbiol Methods (2002) 0.85
Quantification of enterococci and bifidobacteria in Georgia estuaries using conventional and molecular methods. Water Res (2008) 0.84
Pig manure contamination marker selection based on the influence of biological treatment on the dominant fecal microbial groups. Appl Environ Microbiol (2009) 0.82
Denaturing gradient gel electrophoresis (DGGE)-based monitoring of intestinal lactobacilli and bifidobacteria of pigs during a feeding trial. Arch Anim Nutr (2009) 0.79
Extended-spectrum beta-lactamase-producing Enterobacteriaceae in different environments (humans, food, animal farms and sewage). J Antimicrob Chemother (2006) 1.71
Diversity of stx2 converting bacteriophages induced from Shiga-toxin-producing Escherichia coli strains isolated from cattle. Microbiology (2004) 1.53
Description of Bacillus toyonensis sp. nov., a novel species of the Bacillus cereus group, and pairwise genome comparisons of the species of the group by means of ANI calculations. Syst Appl Microbiol (2013) 1.29
Comparison of enterococcal populations in animals, humans, and the environment--a European study. Int J Food Microbiol (2003) 1.23
Occurrence of Escherichia coli O157:H7 and other enterohemorrhagic Escherichia coli in the environment. Environ Sci Technol (2006) 1.10
Use of Bifidobacterium dentium as an indicator of the origin of fecal water pollution. Appl Environ Microbiol (2003) 1.05
Prevalence of the stx2 gene in coliform populations from aquatic environments. Appl Environ Microbiol (2004) 1.04
Occurrence and relatedness of vancomycin-resistant enterococci in animals, humans, and the environment in different European regions. Appl Environ Microbiol (2005) 1.04
Persistence of Bacteroides species populations in a river as measured by molecular and culture techniques. Appl Environ Microbiol (2010) 0.97
Bacteriophages may bias outcome of bacterial enrichment cultures. Appl Environ Microbiol (2005) 0.97
Virulence and antimicrobial resistance profiles among Escherichia coli strains isolated from human and animal wastewater. Res Microbiol (2008) 0.94
Performance characteristics of qPCR assays targeting human- and ruminant-associated bacteroidetes for microbial source tracking across sixteen countries on six continents. Environ Sci Technol (2013) 0.92
Characterization of sewage waters by biochemical fingerprinting of Enterococci. Water Res (2002) 0.92
Genotypic and phenotypic diversity among induced, stx2-carrying bacteriophages from environmental Escherichia coli strains. Appl Environ Microbiol (2008) 0.92
Method for isolation of Bacteroides bacteriophage host strains suitable for tracking sources of fecal pollution in water. Appl Environ Microbiol (2005) 0.89
Differential persistence of F-specific RNA phage subgroups hinders their use as single tracers for faecal source tracking in surface water. Water Res (2009) 0.87
Molecular indicators used in the development of predictive models for microbial source tracking. Appl Environ Microbiol (2010) 0.87
Diversity of the heterotrophic microbial populations for distinguishing natural mineral waters. Int J Food Microbiol (2011) 0.86
Development of a feasible method to extract somatic coliphages from sludge, soil and treated biowaste. J Virol Methods (2007) 0.86
Enumeration of bifidobacterial populations with selective media to determine the source of waterborne fecal pollution. Water Res (2005) 0.85
The effect of reducing agents on the recovery of injured Bifidobacterium cells. J Microbiol Methods (2002) 0.85
Phylogroups, virulence determinants and antimicrobial resistance in stx(2) gene-carrying Escherichia coli isolated from aquatic environments. Res Microbiol (2009) 0.84
Newly identified bacteriophages carrying the stx2g Shiga toxin gene isolated from Escherichia coli strains in polluted waters. FEMS Microbiol Lett (2006) 0.84
Complete Genome Sequence of Bacillus toyonensis BCT-7112T, the Active Ingredient of the Feed Additive Preparation Toyocerin. Genome Announc (2013) 0.84
Life cycle of the fish parasite Gnathia maxillaris (Crustacea: Isopoda: Gnathiidae). Folia Parasitol (Praha) (2014) 0.83
New molecular quantitative PCR assay for detection of host-specific Bifidobacteriaceae suitable for microbial source tracking. Appl Environ Microbiol (2012) 0.83
Characterization of microbial populations associated with natural swimming pools. Int J Hyg Environ Health (2012) 0.81
Detection of quorum-sensing-related molecules in Vibrio scophthalmi. BMC Microbiol (2008) 0.80
Identification of Enterococcus spp. based on specific hybridisation with 16S rDNA probes. J Microbiol Methods (2002) 0.80
Vancomycin- and erythromycin-resistant enterococci in a pig farm and its environment. Environ Microbiol (2006) 0.79
Isolation of bacteriophage host strains of Bacteroides species suitable for tracking sources of animal faecal pollution in water. Environ Microbiol (2011) 0.78
Distribution and persistence of fecal bacterial populations in liquid and dewatered sludge from a biological treatment plant. J Gen Appl Microbiol (2005) 0.77
Determination of fecal contamination origin in reclaimed water open-air ponds using biochemical fingerprinting of enterococci and fecal coliforms. Environ Sci Pollut Res Int (2012) 0.77
Determination of Vibrio scophthalmi and its phenotypic diversity in turbot larvae. Environ Microbiol (2004) 0.77
Quorum-sensing regulates biofilm formation in Vibrio scophthalmi. BMC Microbiol (2012) 0.77
Surface plasmon resonance assay for real-time monitoring of somatic coliphages in wastewaters. Appl Environ Microbiol (2008) 0.76
Use of abundance ratios of somatic coliphages and bacteriophages of Bacteroides thetaiotaomicron GA17 for microbial source identification. Water Res (2012) 0.76
New multiplatform computer program for numerical identification of microorganisms. J Clin Microbiol (2009) 0.75
Neoscardovia arbecensis gen. nov., sp. nov., isolated from porcine slurries. Syst Appl Microbiol (2012) 0.75
Comparison of the Performance of Different Microbial Source Tracking Markers among European and North African Regions. J Environ Qual (2017) 0.75
Identification of Pseudomonas aeruginosa in water-bottling plants on the basis of procedures included in ISO 16266:2006. J Microbiol Methods (2010) 0.75
Antimicrobial resistance and presence of the SXT mobile element in Vibrio spp. isolated from aquaculture facilities. New Microbiol (2014) 0.75