High-throughput typing method to identify a non-outbreak-involved Legionella pneumophila strain colonizing the entire water supply system in the town of Rennes, France.

PubWeight™: 0.86‹?›

🔗 View Article (PMC 3187078)

Published in Appl Environ Microbiol on August 05, 2011

Authors

D Sobral1, P Le Cann, A Gerard, S Jarraud, B Lebeau, F Loisy-Hamon, G Vergnaud, C Pourcel

Author Affiliations

1: Université Paris-Sud, Institut de Génétique et Microbiologie, 91405 Orsay, France.

Articles citing this

High-throughput multilocus sequence typing: bringing molecular typing to the next level. PLoS One (2012) 1.07

Comparative Genomics Reveal That Host-Innate Immune Responses Influence the Clinical Prevalence of Legionella pneumophila Serogroups. PLoS One (2013) 0.97

High throughput multiple locus variable number of tandem repeat analysis (MLVA) of Staphylococcus aureus from human, animal and food sources. PLoS One (2012) 0.91

A new highly discriminatory multiplex capillary-based MLVA assay as a tool for the epidemiological survey of Pseudomonas aeruginosa in cystic fibrosis patients. Eur J Clin Microbiol Infect Dis (2012) 0.89

Genotyping of French Bacillus anthracis strains based on 31-loci multi locus VNTR analysis: epidemiology, marker evaluation, and update of the internet genotype database. PLoS One (2014) 0.88

Legionella species diversity and dynamics from surface reservoir to tap water: from cold adaptation to thermophily. ISME J (2015) 0.77

Development of a Multiple Loci Variable Number of Tandem Repeats Analysis (MLVA) to Unravel the Intra-Pathovar Structure of Pseudomonas syringae pv. actinidiae Populations Worldwide. PLoS One (2015) 0.75

Development of a multiple-locus variable-number tandem-repeat typing scheme for genetic fingerprinting of Burkholderia cenocepacia and application to nationwide epidemiological analysis. J Clin Microbiol (2014) 0.75

Capillary electrophoresis applied to DNA: determining and harnessing sequence and structure to advance bioanalyses (2009-2014). Anal Bioanal Chem (2015) 0.75

Articles cited by this

Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J Clin Microbiol (1988) 28.11

Legionella and Legionnaires' disease: 25 years of investigation. Clin Microbiol Rev (2002) 7.42

Genetic structure of populations of Legionella pneumophila. J Bacteriol (1985) 7.30

Determining confidence intervals when measuring genetic diversity and the discriminatory abilities of typing methods for microorganisms. J Clin Microbiol (2001) 6.26

Guidelines for the validation and application of typing methods for use in bacterial epidemiology. Clin Microbiol Infect (2007) 4.55

Consensus sequence-based scheme for epidemiological typing of clinical and environmental isolates of Legionella pneumophila. J Clin Microbiol (2005) 3.21

Legionella pneumophila pathogesesis: a fateful journey from amoebae to macrophages. Annu Rev Microbiol (2000) 2.50

Addition of neuA, the gene encoding N-acylneuraminate cytidylyl transferase, increases the discriminatory ability of the consensus sequence-based scheme for typing Legionella pneumophila serogroup 1 strains. J Clin Microbiol (2007) 2.45

Bacterial species and speciation. Syst Biol (2001) 2.39

The role of Staphylococcus aureus surface protein SasG in adherence and biofilm formation. Microbiology (2007) 2.15

Legionella pneumophila pangenome reveals strain-specific virulence factors. BMC Genomics (2010) 1.98

Intracellular growth in Acanthamoeba castellanii affects monocyte entry mechanisms and enhances virulence of Legionella pneumophila. Infect Immun (1999) 1.93

Clinical and environmental distributions of Legionella strains in France are different. J Clin Microbiol (2004) 1.91

Multigenome analysis identifies a worldwide distributed epidemic Legionella pneumophila clone that emerged within a highly diverse species. Genome Res (2008) 1.84

Role of biofilms in the survival of Legionella pneumophila in a model potable-water system. Microbiology (2001) 1.69

Characterization of a tandem repeat polymorphism in Legionella pneumophila and its use for genotyping. J Clin Microbiol (2003) 1.67

Distribution of Legionella pneumophila serogroups, monoclonal antibody subgroups and DNA sequence types in recent clinical and environmental isolates from England and Wales (2000-2008). Eur J Clin Microbiol Infect Dis (2009) 1.64

A multicenter evaluation of genotypic methods for the epidemiologic typing of Legionella pneumophila serogroup 1: results of a pan-European study. Clin Microbiol Infect (1999) 1.61

On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing. Biochimie (2007) 1.43

Conjugation-mediated genetic exchange in Legionella pneumophila. J Bacteriol (1985) 1.33

Single clonal origin of a high proportion of Legionella pneumophila serogroup 1 isolates from patients and the environment in the area of Paris, France, over a 10-year period. J Clin Microbiol (1999) 1.31

Legionella pneumophila - a human pathogen that co-evolved with fresh water protozoa. Cell Mol Life Sci (2007) 1.24

Legionella pneumophila serogroup 1 isolates from cooling towers in Japan form a distinct genetic cluster. Microbiol Immunol (2005) 1.11

New endemic Legionella pneumophila serogroup I clones, Ontario, Canada. Emerg Infect Dis (2010) 1.05

Multiple locus variable number of tandem repeats analysis. Methods Mol Biol (2009) 1.04

Resistance of Legionella pneumophila serotype 1 biofilms to chlorine-based disinfection. J Hosp Infect (2009) 1.04

Legionella pneumophila monoclonal antibody subgroups and DNA sequence types isolated in Canada between 1981 and 2009: Laboratory Component of National Surveillance. Eur J Clin Microbiol Infect Dis (2009) 1.00

Lorraine strain of Legionella pneumophila serogroup 1, France. Emerg Infect Dis (2008) 1.00

Quantifying nonvertical inheritance in the evolution of Legionella pneumophila. Mol Biol Evol (2010) 0.97

Multiple-locus variable-number tandem repeat analysis of Legionella pneumophila using multi-colored capillary electrophoresis. J Microbiol Methods (2008) 0.96

Identification of variable-number tandem-repeat (VNTR) sequences in Legionella pneumophila and development of an optimized multiple-locus VNTR analysis typing scheme. J Clin Microbiol (2007) 0.96

Clonal population structure of Legionella pneumophila inferred from allelic profiling. Microbiology (2008) 0.94

Strategies for genotyping: Effectiveness of tailing primers to increase accuracy in short tandem repeat determinations. J Biomol Tech (2002) 0.93

Alternative routes for dissemination of Legionella pneumophila causing three outbreaks in Norway. Environ Sci Technol (2010) 0.90

Investigation of the population structure of Legionella pneumophila by analysis of tandem repeat copy number and internal sequence variation. Microbiology (2011) 0.84

Development of a pilot-scale 1 for Legionella elimination in biofilm in hot water network: heat shock treatment evaluation. J Appl Microbiol (2009) 0.81

[Legionnaire's disease: surveillance in France in 2005]. Med Mal Infect (2007) 0.77

Articles by these authors

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies. Microbiology (2005) 9.83

The hepatitis B virus. Nature (1985) 8.71

Formation of the pool of covalently closed circular viral DNA in hepadnavirus-infected cells. Cell (1986) 6.12

A meta-analysis of thoracic radiotherapy for small-cell lung cancer. N Engl J Med (1992) 5.10

Cloning in Escherichia coli and physical structure of hepatitis B virion DNA. Proc Natl Acad Sci U S A (1979) 4.71

Excretion of hepatitis B surface antigen particles from mouse cells transformed with cloned viral DNA. Proc Natl Acad Sci U S A (1980) 3.97

A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis. BMC Microbiol (2001) 3.83

Transcription of the hepatitis B surface antigen gene in mouse cells transformed with cloned viral DNA. J Virol (1982) 3.51

Candidemia in cancer patients: a prospective, multicenter surveillance study by the Invasive Fungal Infection Group (IFIG) of the European Organization for Research and Treatment of Cancer (EORTC). Clin Infect Dis (1999) 3.39

Presence of integrated hepatitis B virus DNA sequences in cellular DNA of human hepatocellular carcinoma. Nature (1980) 3.16

A gradient of sex linkage in the pseudoautosomal region of the human sex chromosomes. Nature (1986) 3.09

A deletion map of the human Y chromosome based on DNA hybridization. Am J Hum Genet (1986) 3.03

Molecular comparison of virulence plasmids in Shigella and enteroinvasive Escherichia coli. Ann Microbiol (Paris) (1983) 2.93

Transmembrane topology and histidine protein kinase activity of AgrC, the agr signal receptor in Staphylococcus aureus. Mol Microbiol (1998) 2.77

Phage conversion of Panton-Valentine leukocidin in Staphylococcus aureus: molecular analysis of a PVL-converting phage, phiSLT. Gene (2001) 2.67

Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis. BMC Microbiol (2004) 2.39

Pseudoautosomal DNA sequences in the pairing region of the human sex chromosomes. Nature (1985) 2.14

A controlled study of postoperative radiotherapy for patients with completely resected nonsmall cell lung carcinoma. Groupe d'Etude et de Traitement des Cancers Bronchiques. Cancer (1999) 2.12

Recombinant granulocyte colony stimulating factor reduces the infectious complications of cytotoxic chemotherapy. Eur J Cancer (1993) 2.08

Maternal inhibition of hepatitis B surface antigen gene expression in transgenic mice correlates with de novo methylation. Nature (1987) 2.00

Further evidence for elevated human minisatellite mutation rate in Belarus eight years after the Chernobyl accident. Mutat Res (1997) 1.92

Complex recombination events at the hypermutable minisatellite CEB1 (D2S90). EMBO J (1994) 1.79

A DNA probe detecting multiple haplotypes of the human Y chromosome. Am J Hum Genet (1986) 1.77

Real-time RT-PCR for norovirus screening in shellfish. J Virol Methods (2005) 1.75

Specific expression of hepatitis B surface antigen (HBsAg) in transgenic mice. Science (1985) 1.70

Replication and gene expression of hepatitis B virus in a transgenic mouse that contains the complete viral genome. J Virol (1988) 1.68

Characterization of a tandem repeat polymorphism in Legionella pneumophila and its use for genotyping. J Clin Microbiol (2003) 1.67

[Cloning of the hepatitis B virus genome in Escherichia coli]. C R Acad Sci Hebd Seances Acad Sci D (1978) 1.62

Epidemiological trends in invasive aspergillosis in France: the SAIF network (2005-2007). Clin Microbiol Infect (2011) 1.55

Cotranscription and intergenic splicing of human galactose-1-phosphate uridylyltransferase and interleukin-11 receptor alpha-chain genes generate a fusion mRNA in normal cells. Implication for the production of multidomain proteins during evolution. J Biol Chem (1998) 1.42

Differential recognition of ORF2 protein from type 1 and type 2 porcine circoviruses and identification of immunorelevant epitopes. J Gen Virol (2000) 1.41

Identification of variable-number tandem-repeat loci in Leptospira interrogans sensu stricto. J Clin Microbiol (2005) 1.41

Use of simulated blood cultures to compare a specific fungal medium with a standard microorganism medium for yeast detection. Eur J Clin Microbiol Infect Dis (1998) 1.41

Critical illness-related corticosteroid insufficiency in cardiogenic shock. Br J Anaesth (2013) 1.38

Cost effectiveness of the induced sputum technique for the diagnosis of Pneumocystis carinii pneumonia (PCP) in HIV-infected patients. Eur Respir J (1993) 1.37

Comparison of the new API Candida system to the ID 32C system for identification of clinically important yeast species. J Clin Microbiol (1996) 1.35

Age is not a limiting factor for radical radiotherapy in pelvic malignancies. Radiother Oncol (1997) 1.29

Mapping of a gene for long QT syndrome to chromosome 4q25-27. Am J Hum Genet (1995) 1.29

Incidence of Staphylococcus aureus with reduced susceptibility to glycopeptides in two French hospitals. Clin Microbiol Infect (2001) 1.28

Meiotic instability of human minisatellite CEB1 in yeast requires DNA double-strand breaks. Nat Genet (1999) 1.26

A genetic linkage map of the rat derived from recombinant inbred strains. Mamm Genome (1996) 1.25

The kappa-carrageenase of the marine bacterium Cytophaga drobachiensis. Structural and phylogenetic relationships within family-16 glycoside hydrolases. Mol Biol Evol (1998) 1.25

Phase II randomised trial comparing docetaxel given every 3 weeks with weekly schedule as second-line therapy in patients with advanced non-small-cell lung cancer (NSCLC). Ann Oncol (2005) 1.23

Extensive DNA sequence homologies between the human Y and the long arm of the X chromosome. EMBO J (1985) 1.23

Recent human-specific spreading of a subtelomeric domain. Genomics (1998) 1.22

The pseudoautosomal region of the human sex chromosomes. Cold Spring Harb Symp Quant Biol (1986) 1.21

Evaluation of Candida ID, a new chromogenic medium for fungal isolation and preliminary identification of some yeast species. J Clin Microbiol (2001) 1.20

Final results of a randomized trial on the treatment of rectal cancer with preoperative radiotherapy alone or in combination with 5-fluorouracil, followed by radical surgery. Trial of the European Organization on Research and Treatment of Cancer Gastrointestinal Tract Cancer Cooperative Group. Cancer (1984) 1.18

Characterization of genetic diversity of Bacillus anthracis in France by using high-resolution melting assays and multilocus variable-number tandem-repeat analysis. J Clin Microbiol (2011) 1.17

Specific real-time PCR for simultaneous detection and identification of Legionella pneumophila serogroup 1 in water and clinical samples. Appl Environ Microbiol (2010) 1.17

Genetic polymorphism of Aspergillus fumigatus in clinical samples from patients with invasive aspergillosis: investigation using multiple typing methods. J Clin Microbiol (2001) 1.15

Hepatitis B surface antigen gene expression is regulated by sex steroids and glucocorticoids in transgenic mice. Proc Natl Acad Sci U S A (1987) 1.15

Two highly polymorphic minisatellites from the pseudoautosomal region of the human sex chromosomes. EMBO J (1987) 1.15

A large multi-pathogen waterborne community outbreak linked to faecal contamination of a groundwater system, France, 2000. Clin Microbiol Infect (2006) 1.15

Alveolar echinococcosis of the liver: MR findings. J Comput Assist Tomogr (1990) 1.11

Children of chernobyl cleanup workers do not show elevated rates of mutations in minisatellite alleles. Radiat Res (2001) 1.11

Using bronchoscopy and biopsy to diagnose early inhalation injury. Macroscopic and histologic findings. Chest (1995) 1.10

Clusters of travel associated legionnaires' disease in France, September 2001- August 2003. Euro Surveill (2004) 1.10

Invasive Fusarium infections: a retrospective survey of 31 cases. The French 'Groupe d'Etudes des Mycoses Opportunistes' GEMO. J Med Vet Mycol (1997) 1.10

Auxacolor, a new commercial system for yeast identification: evaluation of 182 strains comparatively with ID 32C. Ann Biol Clin (Paris) (1995) 1.08

Computed tomography of mediastinal lymph nodes in nonsmall cell lung cancer. A new approach based on the lymphatic pathway of tumor spread. J Comput Assist Tomogr (1988) 1.08

A VNTR isolated by size selection of human DNA fragments detects RFLPs at the extremity of 1p and 4q. Nucleic Acids Res (1991) 1.08

Review: norovirus prevalence in Belgian, Canadian and French fresh produce: a threat to human health? Int J Food Microbiol (2011) 1.07

Use of multilocus variable-number tandem repeat analysis (MLVA) in eight European countries, 2012. Euro Surveill (2013) 1.07

Physical mapping of the holoprosencephaly critical region on chromosome 7q36. Nat Genet (1993) 1.07

Clinical characteristics of the smooth tubercle bacilli 'Mycobacterium canettii' infection suggest the existence of an environmental reservoir. Clin Microbiol Infect (2010) 1.06

Transgenesis in rats: technical aspects and models. Transgenic Res (1996) 1.05

Vinorelbine versus vinorelbine plus cisplatin in advanced non-small cell lung cancer: a randomized trial. Ann Oncol (1994) 1.04

Aspergillus Fumigatus antigen detection in sera from patients at risk for invasive aspergillosis. J Clin Microbiol (2000) 1.03

Interim analysis of a phase III study on preoperative radiation therapy in resectable rectal carcinoma. Trial of the Gastrointestinal Tract Cancer Cooperative Group of the European Organization for Research on Treatment of Cancer (EORTC). Cancer (1985) 1.02

Bacteriophage lambda-E. coli K12 vector-host system for gene cloning and expression under lactose promoter control: I. DNA fragment insertion at the lacZ EcoRI restriction site. Mol Gen Genet (1979) 1.02

Evaluation of Albicans ID plates. J Clin Microbiol (1995) 1.02

Multicentric epidemiological study of Aspergillus fumigatus isolates by multilocus enzyme electrophoresis. J Clin Microbiol (1996) 1.02

Transgenic mice containing hepatitis B virus sequences are more susceptible to carcinogen-induced hepatocarcinogenesis. Carcinogenesis (1990) 0.99

Eight-year surveillance of environmental fungal contamination in hospital operating rooms and haematological units. J Hosp Infect (2002) 0.98

[Our first clinical test of disopyramide (H 3292) on cardiac rhythm disorders]. Therapie (1968) 0.97

Virulence of Aspergillus fumigatus strains investigated by random amplified polymorphic DNA analysis. J Med Microbiol (1995) 0.97

Allelic loss of the short arm of chromosome 4 in neuroblastoma suggests a novel tumour suppressor gene locus. Hum Genet (1996) 0.97

Interferon/antioxidant combination therapy for chronic hepatitis C--a controlled pilot trial. Antiviral Res (1999) 0.96

Molecular typing of Aspergillus fumigatus strains by sequence-specific DNA primer (SSDP) analysis. FEMS Immunol Med Microbiol (1997) 0.96

Molecular characterisation of Brucella species. Rev Sci Tech (2013) 0.95

Control of expression and methylation of a hepatitis B virus transgene by strain-specific modifiers. DNA Cell Biol (1998) 0.95

Histochemical study of the mucosubstances in the canine stomach. I. The resting mucosa. Am J Dig Dis (1967) 0.95

Analysis of distribution in the human, pig, and rat genomes points toward a general subtelomeric origin of minisatellite structures. Genomics (1998) 0.95

Molecular-cytogenetic detection of a deletion of 1p36.3. J Med Genet (1997) 0.94

EORTC trials in large bowel cancer. Int J Colorectal Dis (1986) 0.93

Molecular epidemiology of human and animal tuberculosis in Ibadan, Southwestern Nigeria. Vet Microbiol (2011) 0.92

The CEPH consortium linkage map of human chromosome 16. Genomics (1995) 0.92

Combination of three typing methods for the molecular epidemiology of Aspergillus fumigatus infections. European Research Group on Biotype and Genotype of Aspergillus. J Med Microbiol (1999) 0.92

Isolation and characterization of a protein-tyrosine kinase and a phosphotyrosine-protein phosphatase from Klebsiella pneumoniae. Comp Biochem Physiol B Biochem Mol Biol (2002) 0.92

Hospital-wide prospective mandatory surveillance of invasive aspergillosis in a French teaching hospital (2000-2002). J Hosp Infect (2005) 0.92

A submicroscopic unbalanced subtelomeric translocation t(2p;10q) identified by fluorescence in situ hybridization: fetus with increased nuchal translucency and normal standard karyotype with later growth and developmental delay, rhombencephalosynapsis (RES). Ann Genet (2004) 0.91

Factors associated with hospital mortality in community-acquired legionellosis in France. Eur Respir J (2011) 0.90

Detection of polymorphic loci in complex genomes with synthetic tandem repeats. Genomics (1992) 0.90

Superior vena cava syndrome in small-cell lung cancer. Arch Intern Med (1993) 0.90

A new highly discriminatory multiplex capillary-based MLVA assay as a tool for the epidemiological survey of Pseudomonas aeruginosa in cystic fibrosis patients. Eur J Clin Microbiol Infect Dis (2012) 0.89

Failure of the perioperative PCV neoadjuvant polychemotherapy in resectable bronchogenic non-small cell carcinoma. Results from a randomized phase II trial. Cancer (1990) 0.89