Published in Genes Dev on October 01, 2011
Centering the Organizing Center in the Arabidopsis thaliana Shoot Apical Meristem by a Combination of Cytokinin Signaling and Self-Organization. PLoS One (2016) 2.01
Small signaling peptides in Arabidopsis development: how cells communicate over a short distance. Plant Cell (2012) 1.38
The yin-yang of hormones: cytokinin and auxin interactions in plant development. Plant Cell (2015) 1.20
Morphogenic Regulators Baby boom and Wuschel Improve Monocot Transformation. Plant Cell (2016) 1.19
Plant stem cell maintenance involves direct transcriptional repression of differentiation program. Mol Syst Biol (2013) 1.17
Stem cell function during plant vascular development. EMBO J (2012) 1.17
Regulation of Arabidopsis embryo and endosperm development by the polypeptide signaling molecule CLE8. Plant Cell (2012) 1.14
Modeling regulatory networks to understand plant development: small is beautiful. Plant Cell (2012) 1.13
A mechanistic framework for noncell autonomous stem cell induction in Arabidopsis. Proc Natl Acad Sci U S A (2014) 1.11
Mechanical constraints imposed by 3D cellular geometry and arrangement modulate growth patterns in the Arabidopsis embryo. Proc Natl Acad Sci U S A (2014) 1.09
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Control of plant stem cell function by conserved interacting transcriptional regulators. Nature (2014) 1.02
Spatiotemporal signalling in plant development. Nat Rev Genet (2013) 0.98
Expression profiling of tomato pre-abscission pedicels provides insights into abscission zone properties including competence to respond to abscission signals. BMC Plant Biol (2013) 0.94
Nodule Inception creates a long-distance negative feedback loop involved in homeostatic regulation of nodule organ production. Proc Natl Acad Sci U S A (2014) 0.94
Structure-function analysis of the GmRIC1 signal peptide and CLE domain required for nodulation control in soybean. J Exp Bot (2013) 0.92
Signaling from maize organ primordia via FASCIATED EAR3 regulates stem cell proliferation and yield traits. Nat Genet (2016) 0.86
ROW1 maintains quiescent centre identity by confining WOX5 expression to specific cells. Nat Commun (2015) 0.86
Epigenetic Mechanisms Are Critical for the Regulation of WUSCHEL Expression in Floral Meristems. Plant Physiol (2015) 0.86
The role of WOX genes in flower development. Ann Bot (2014) 0.85
Regulation of floral stem cell termination in Arabidopsis. Front Plant Sci (2015) 0.83
The never-ending story: from pluripotency to plant developmental plasticity. Development (2015) 0.83
Discovery and targeted LC-MS/MS of purified polerovirus reveals differences in the virus-host interactome associated with altered aphid transmission. PLoS One (2012) 0.83
Mathematical modelling of WOX5- and CLE40-mediated columella stem cell homeostasis in Arabidopsis. J Exp Bot (2015) 0.82
POPCORN functions in the auxin pathway to regulate embryonic body plan and meristem organization in Arabidopsis. Plant Cell (2011) 0.82
ULTRAPETALA1 and LEAFY pathways function independently in specifying identity and determinacy at the Arabidopsis floral meristem. Ann Bot (2014) 0.82
Axillary Meristem Formation in Rice Requires the WUSCHEL Ortholog TILLERS ABSENT1. Plant Cell (2015) 0.81
An epidermis-driven mechanism positions and scales stem cell niches in plants. Sci Adv (2016) 0.80
WUSCHEL-RELATED HOMEOBOX4 is involved in meristem maintenance and is negatively regulated by the CLE gene FCP1 in rice. Plant Cell (2013) 0.80
Shared and distinct functions of the pseudokinase CORYNE (CRN) in shoot and root stem cell maintenance of Arabidopsis. J Exp Bot (2016) 0.79
Phloem Transport of the Receptor DWARF14 Protein Is Required for Full Function of Strigolactones. Plant Physiol (2016) 0.79
Ferns: the missing link in shoot evolution and development. Front Plant Sci (2015) 0.78
MOL1 is required for cambium homeostasis in Arabidopsis. Plant J (2016) 0.78
Identification of evolutionarily conserved amino acid residues in homeodomain of KNOX proteins for intercellular trafficking. Plant Signal Behav (2014) 0.78
Spatial expression of CLAVATA3 in the shoot apical meristem suggests it is not a stem cell marker in soybean. J Exp Bot (2013) 0.78
The Leaf Adaxial-Abaxial Boundary and Lamina Growth. Plants (Basel) (2013) 0.78
Translational control of Arabidopsis meristem stability and organogenesis by the eukaryotic translation factor eIF3h. PLoS One (2014) 0.77
Threshold-dependent transcriptional discrimination underlies stem cell homeostasis. Proc Natl Acad Sci U S A (2016) 0.77
Usual and unusual development of the dicot leaf: involvement of transcription factors and hormones. Plant Cell Rep (2013) 0.77
Histone H4R3 methylation catalyzed by SKB1/PRMT5 is required for maintaining shoot apical meristem. PLoS One (2013) 0.77
Transcriptome profiling for discovery of genes involved in shoot apical meristem and flower development. Genom Data (2014) 0.77
DNA-dependent homodimerization, sub-cellular partitioning, and protein destabilization control WUSCHEL levels and spatial patterning. Proc Natl Acad Sci U S A (2016) 0.77
HAM proteins promote organ indeterminacy: but how? Plant Signal Behav (2012) 0.77
A WUSCHEL-Independent Stem Cell Specification Pathway Is Repressed by PHB, PHV and CNA in Arabidopsis. PLoS One (2015) 0.77
ALTERED MERISTEM PROGRAM1 suppresses ectopic stem cell niche formation in the shoot apical meristem in a largely cytokinin-independent manner. Plant Physiol (2015) 0.76
WUSCHEL protein movement and stem cell homeostasis. Plant Signal Behav (2012) 0.76
The Mobile bypass Signal Arrests Shoot Growth by Disrupting Shoot Apical Meristem Maintenance, Cytokinin Signaling, and WUS Transcription Factor Expression. Plant Physiol (2016) 0.75
Different reprogramming propensities in plants and mammals: Are small variations in the core network wirings responsible? PLoS One (2017) 0.75
Two-Step Functional Innovation of the Stem-Cell Factors WUS/WOX5 during Plant Evolution. Mol Biol Evol (2017) 0.75
Domestication-driven Gossypium profilin 1 (GhPRF1) gene transduces early flowering phenotype in tobacco by spatial alteration of apical/floral-meristem related gene expression. BMC Plant Biol (2016) 0.75
AtWuschel promotes formation of the embryogenic callus in Gossypium hirsutum. PLoS One (2014) 0.75
APETALA2 antagonizes the transcriptional activity of AGAMOUS in regulating floral stem cells in Arabidopsis thaliana. New Phytol (2016) 0.75
Plasmodesmata spread their influence. F1000Prime Rep (2015) 0.75
Sirtinol, a Sir2 protein inhibitor, affects stem cell maintenance and root development in Arabidopsis thaliana by modulating auxin-cytokinin signaling components. Sci Rep (2017) 0.75
Ectopic expression of WUS in hypocotyl promotes cell division via GRP23 in Arabidopsis. PLoS One (2013) 0.75
Homeobox Is Pivotal for OsWUS Controlling Tiller Development and Female Fertility in Rice. G3 (Bethesda) (2016) 0.75
Plasmodesmata-Mediated Cell-to-Cell Communication in the Shoot Apical Meristem: How Stem Cells Talk. Plants (Basel) (2017) 0.75
HANABA TARANU regulates the shoot apical meristem and leaf development in cucumber (Cucumis sativus L.). J Exp Bot (2015) 0.75
OBE3 and WUS Interaction in Shoot Meristem Stem Cell Regulation. PLoS One (2016) 0.75
WUSCHEL-responsive At5g65480 interacts with CLAVATA components in vitro and in transient expression. PLoS One (2013) 0.75
Live Imaging of Shoot Meristems on an Inverted Confocal Microscope Using an Objective Lens Inverter Attachment. Front Plant Sci (2017) 0.75
Molecular aspects of zygotic embryogenesis in sunflower (Helianthus annuus L.): correlation of positive histone marks with HaWUS expression and putative link HaWUS/HaL1L. Planta (2015) 0.75
Expression of the CLE-RS3 gene suppresses root nodulation in Lotus japonicus. J Plant Res (2016) 0.75
Genome-wide analysis of transcription factors during somatic embryogenesis in banana (Musa spp.) cv. Grand Naine. PLoS One (2017) 0.75
Cytokinin Signaling Activates WUSCHEL Expression during Axillary Meristem Initiation. Plant Cell (2017) 0.75
Type-B ARABIDOPSIS RESPONSE REGULATORs Is Critical to the Specification of Shoot Stem Cell Niche by Dual Regulation of WUSCHEL. Plant Cell (2017) 0.75
The vascular plants: open system of growth. Dev Genes Evol (2017) 0.75
Model of structuring the stem cell niche in shoot apical meristem of Arabidopsis thaliana. Dokl Biol Sci (2013) 0.75
Redox regulation of plant stem cell fate. EMBO J (2017) 0.75
Signaling of cell fate decisions by CLAVATA3 in Arabidopsis shoot meristems. Science (1999) 8.61
Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem. Cell (1998) 8.33
The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and floral meristem size in Arabidopsis. Cell (1997) 8.31
The stem cell population of Arabidopsis shoot meristems in maintained by a regulatory loop between the CLAVATA and WUSCHEL genes. Cell (2000) 7.89
The WUSCHEL gene is required for shoot and floral meristem integrity in Arabidopsis. Development (1996) 6.11
Dependence of stem cell fate in Arabidopsis on a feedback loop regulated by CLV3 activity. Science (2000) 6.05
WUSCHEL controls meristem function by direct regulation of cytokinin-inducible response regulators. Nature (2005) 3.89
A plant peptide encoded by CLV3 identified by in situ MALDI-TOF MS analysis. Science (2006) 3.84
A molecular link between stem cell regulation and floral patterning in Arabidopsis. Cell (2001) 3.55
Arabidopsis CLV3 peptide directly binds CLV1 ectodomain. Science (2008) 3.31
The receptor kinase CORYNE of Arabidopsis transmits the stem cell-limiting signal CLAVATA3 independently of CLAVATA1. Plant Cell (2008) 2.66
Real-time lineage analysis reveals oriented cell divisions associated with morphogenesis at the shoot apex of Arabidopsis thaliana. Development (2004) 2.64
Gene expression map of the Arabidopsis shoot apical meristem stem cell niche. Proc Natl Acad Sci U S A (2009) 2.39
Multiple feedback loops through cytokinin signaling control stem cell number within the Arabidopsis shoot meristem. Proc Natl Acad Sci U S A (2009) 2.36
Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem. Bioinformatics (2005) 2.20
Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex. Science (2005) 2.11
RPK2 is an essential receptor-like kinase that transmits the CLV3 signal in Arabidopsis. Development (2010) 1.90
Regulation of CLV3 expression by two homeobox genes in Arabidopsis. Plant Physiol (2002) 1.88
Dynamic and compensatory responses of Arabidopsis shoot and floral meristems to CLV3 signaling. Plant Cell (2006) 1.82
Subcellular localization determines the availability of non-targeted proteins to plasmodesmatal transport. Curr Biol (2000) 1.81
Mechanisms regulating SHORT-ROOT intercellular movement. Curr Biol (2004) 1.70
Not just another hole in the wall: understanding intercellular protein trafficking. Genes Dev (2005) 1.61
WUSCHEL mediates stem cell homeostasis by regulating stem cell number and patterns of cell division and differentiation of stem cell progenitors. Development (2010) 1.22
Stem cells and their niches: integrated units that maintain Drosophila tissues. Cold Spring Harb Symp Quant Biol (2008) 1.20
A dynamic model for stem cell homeostasis and patterning in Arabidopsis meristems. PLoS One (2010) 1.12
Live-imaging stem-cell homeostasis in the Arabidopsis shoot apex. Curr Opin Plant Biol (2007) 1.06
The Arabidopsis receptor-like kinase STRUBBELIG mediates inter-cell-layer signaling during floral development. Dev Biol (2008) 0.96
Signaling pathways maintaining stem cells at the plant shoot apex. Semin Cell Dev Biol (2009) 0.88
Developmental patterning by mechanical signals in Arabidopsis. Science (2008) 5.04
Cloning and characterization of microRNAs from rice. Plant Cell (2005) 3.72
The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Plant Cell (2004) 3.41
Contrapuntal networks of gene expression during Arabidopsis seed filling. Plant Cell (2002) 3.33
Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis. Proc Natl Acad Sci U S A (2009) 2.77
Alignment between PIN1 polarity and microtubule orientation in the shoot apical meristem reveals a tight coupling between morphogenesis and auxin transport. PLoS Biol (2010) 2.44
Gene expression map of the Arabidopsis shoot apical meristem stem cell niche. Proc Natl Acad Sci U S A (2009) 2.39
Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem. Bioinformatics (2005) 2.20
Identification and characterization of endogenous small interfering RNAs from rice. Nucleic Acids Res (2005) 2.18
Pattern formation during de novo assembly of the Arabidopsis shoot meristem. Development (2007) 2.02
Annotating genes of known and unknown function by large-scale coexpression analysis. Plant Physiol (2008) 1.95
Arabidopsis PLETHORA transcription factors control phyllotaxis. Curr Biol (2011) 1.90
Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana. Plant J (2004) 1.87
Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis. BMC Mol Biol (2008) 1.73
Arabidopsis lateral organ boundaries negatively regulates brassinosteroid accumulation to limit growth in organ boundaries. Proc Natl Acad Sci U S A (2012) 1.72
The Arabidopsis JAGGED gene encodes a zinc finger protein that promotes leaf tissue development. Development (2004) 1.68
Combined SHOOT MERISTEMLESS and WUSCHEL trigger ectopic organogenesis in Arabidopsis. Development (2002) 1.67
ChemmineR: a compound mining framework for R. Bioinformatics (2008) 1.64
ChemMine tools: an online service for analyzing and clustering small molecules. Nucleic Acids Res (2011) 1.56
Self-organization in high-density bacterial colonies: efficient crowd control. PLoS Biol (2007) 1.52
Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis. Proc Natl Acad Sci U S A (2013) 1.48
Acoustic control of suspended particles in micro fluidic chips. Lab Chip (2004) 1.46
Differential distribution of lipid microemboli after cardiac surgery. Ann Thorac Surg (2006) 1.43
Clusters of bioactive compounds target dynamic endomembrane networks in vivo. Proc Natl Acad Sci U S A (2011) 1.41
Juvenile hormone and its receptor, methoprene-tolerant, control the dynamics of mosquito gene expression. Proc Natl Acad Sci U S A (2013) 1.39
A maximum common substructure-based algorithm for searching and predicting drug-like compounds. Bioinformatics (2008) 1.38
Tomato susceptibility to root-knot nematodes requires an intact jasmonic acid signaling pathway. Mol Plant Microbe Interact (2008) 1.34
Switching desaturase enzyme specificity by alternate subcellular targeting. Proc Natl Acad Sci U S A (2004) 1.28
Subcellular and supracellular mechanical stress prescribes cytoskeleton behavior in Arabidopsis cotyledon pavement cells. Elife (2014) 1.28
A modeling study on how cell division affects properties of epithelial tissues under isotropic growth. PLoS One (2010) 1.25
WUSCHEL mediates stem cell homeostasis by regulating stem cell number and patterns of cell division and differentiation of stem cell progenitors. Development (2010) 1.22
Deciphering the ubiquitin-mediated pathway in apicomplexan parasites: a potential strategy to interfere with parasite virulence. PLoS One (2008) 1.18
Plant stem cell maintenance involves direct transcriptional repression of differentiation program. Mol Syst Biol (2013) 1.17
Carrier medium exchange through ultrasonic particle switching in microfluidic channels. Anal Chem (2005) 1.17
The synthetic elicitor 3,5-dichloroanthranilic acid induces NPR1-dependent and NPR1-independent mechanisms of disease resistance in Arabidopsis. Plant Physiol (2009) 1.16
Genome cluster database. A sequence family analysis platform for Arabidopsis and rice. Plant Physiol (2005) 1.14
SEED: efficient clustering of next-generation sequences. Bioinformatics (2011) 1.14
A rate equation approach to elucidate the kinetics and robustness of the TGF-beta pathway. Biophys J (2006) 1.13
Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants. J Biol Chem (2006) 1.11
Gamma carbonic anhydrases in plant mitochondria. Plant Mol Biol (2004) 1.09
What makes species unique? The contribution of proteins with obscure features. Genome Biol (2006) 1.08
Regulated transport as a mechanism for pattern generation: capabilities for phyllotaxis and beyond. J Theor Biol (2009) 1.07
Modelling meristem development in plants. Curr Opin Plant Biol (2006) 0.99
Modeling auxin-regulated development. Cold Spring Harb Perspect Biol (2010) 0.97
In planta expression or delivery of potato aphid Macrosiphum euphorbiae effectors Me10 and Me23 enhances aphid fecundity. Mol Plant Microbe Interact (2013) 0.96
Small RNA profiling reveals phosphorus deficiency as a contributing factor in symptom expression for citrus huanglongbing disease. Mol Plant (2013) 0.95
MODIFIED VACUOLE PHENOTYPE1 is an Arabidopsis myrosinase-associated protein involved in endomembrane protein trafficking. Plant Physiol (2009) 0.94
Combinatorial expression of Prospero, Seven-up, and Elav identifies progenitor cell types during sense-organ differentiation in the Drosophila antenna. Dev Biol (2003) 0.93
A cell-based model for quorum sensing in heterogeneous bacterial colonies. PLoS Comput Biol (2010) 0.92
Distinguishing humans from great apes with AluYb8 repeats. J Mol Biol (2004) 0.92
The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element. Development (2012) 0.92
Automated tracking of stem cell lineages of Arabidopsis shoot apex using local graph matching. Plant J (2009) 0.92
fmcsR: mismatch tolerant maximum common substructure searching in R. Bioinformatics (2013) 0.91
Asystole and increased serum myoglobin levels associated with 'packing blackout' in a competitive breath-hold diver. Clin Physiol Funct Imaging (2009) 0.91
Stem cell maintenance in shoot apical meristems. Curr Opin Plant Biol (2011) 0.90
In the eye of both patient and spouse: memory is poor 1 to 2 years after coronary bypass and angioplasty. Ann Thorac Surg (2002) 0.90
Adaptive cell segmentation and tracking for volumetric confocal microscopy images of a developing plant meristem. Mol Plant (2011) 0.89
Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening. Physiol Plant (2013) 0.88
The MOSS Physcomitrella patens reproductive organ development is highly organized, affected by the two SHI/STY genes and by the level of active auxin in the SHI/STY expression domain. Plant Physiol (2013) 0.88
On evaluating models in Computational Morphodynamics. Curr Opin Plant Biol (2011) 0.88
BRANCH: boosting RNA-Seq assemblies with partial or related genomic sequences. Bioinformatics (2013) 0.87
Differential gene expression analysis using coexpression and RNA-Seq data. Bioinformatics (2013) 0.85
Towards a modeling infrastructure for studying plant cells. Plant Physiol (2003) 0.85
Ectopic expression of mitochondrial gamma carbonic anhydrase 2 causes male sterility by anther indehiscence. Plant Mol Biol (2009) 0.84
Expression analysis of Arabidopsis vacuolar sorting receptor 3 reveals a putative function in guard cells. J Exp Bot (2008) 0.83
Characterization of lipid particles in shed mediastinal blood. Ann Thorac Surg (2008) 0.83
Increased S100B in blood after cardiac surgery is a powerful predictor of late mortality. Ann Thorac Surg (2003) 0.81
Accelerated similarity searching and clustering of large compound sets by geometric embedding and locality sensitive hashing. Bioinformatics (2010) 0.81
Identification of novel markers for stem-cell niche of Arabidopsis shoot apex. Gene Expr Patterns (2010) 0.81
Isolation and analysis of mRNAs from specific cell types of plants by ribosome immunopurification. Methods Mol Biol (2013) 0.81
Nuclear-encoded mitochondrial complex I gene expression is restored to normal levels by inhibition of unedited ATP9 transgene expression in Arabidopsis thaliana. Plant Physiol Biochem (2006) 0.80
Adaptive geometric tessellation for 3D reconstruction of anisotropically developing cells in multilayer tissues from sparse volumetric microscopy images. PLoS One (2013) 0.80
Microarray analysis of tomato's early and late wound response reveals new regulatory targets for Leucine aminopeptidase A. PLoS One (2013) 0.80
Cytokinin signaling regulates pavement cell morphogenesis in Arabidopsis. Cell Res (2012) 0.79
Decoding the ubiquitin-mediated pathway of arthropod disease vectors. PLoS One (2013) 0.79
Models of sequestration and receptor cross-talk for explaining multiple mutants in plant stem cell regulation. BMC Syst Biol (2011) 0.78
The kinetics of lipid micro-emboli during cardiac surgery studied in a porcine model. Scand Cardiovasc J (2008) 0.78
Predicting conserved protein motifs with Sub-HMMs. BMC Bioinformatics (2010) 0.78
WUSCHEL-mediated cellular feedback network imparts robustness to stem cell homeostasis. Plant Signal Behav (2011) 0.77
Increased serum levels of the brain damage marker S100B after apnea in trained breath-hold divers: a study including respiratory and cardiovascular observations. J Appl Physiol (1985) (2009) 0.77
Cheminformatic analysis of high-throughput compound screens. Methods Mol Biol (2014) 0.76
WUSCHEL protein movement and stem cell homeostasis. Plant Signal Behav (2012) 0.76
Gene expression analysis of shoot apical meristem cell types. Methods Mol Biol (2013) 0.75
Computational tools for quantitative analysis of cell growth patterns and morphogenesis in actively developing plant stem cell niches. Methods Mol Biol (2012) 0.75
Endomembrane dissection using chemically induced bioactive clusters. Methods Mol Biol (2014) 0.75
Single feature polymorphism detection using recombinant inbred line microarray expression data. Bioinformatics (2010) 0.75
A continuous growth model for plant tissue. Phys Biol (2016) 0.75
Protein S100B after cardiac surgery: an indicator of long-term anxiety? Scand Cardiovasc J (2007) 0.75